Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g1390 ATGGCGGCTCCGGCTGACCGGCTCCGCCCTGTTGTGAAGTTTTCCAGCCAGGGGATTCGTTTTGATGAGGATTCTGCGGAGACCCGGCCTCTGCTTTCCAGGATGCTGAATTATCCGATTGGGATTATTCACCACCAGTTGCGCCGCCGTCTCGGTGCCGGGAAGCCCCAGGTGCCAGGGCGTCAGCAGTCTTTTAGTCGAGATCTTGGCCATGCAGCTGCGGAAACCCTTCTTATTACTCGGTTGAGCTTCACTCTCCTTCGATCTCTTGGGGTAGGGTACCGGTGGGTCGTAAAATTAACTGCACTTGCAGTTTATGCCATTCTTCTTATGCCCGGTTTTCTTCAAGTTATGTATGATTATTACTTCTCAAGTCAGGTTCGGAGGGATATTATTTATGGATATCAACCAAGAAATAGCTTGGATTTGTATCTACCTACAAATACTGATAAAAAAAAACCAGTTGTGATATTTGTTAGCGGTGGAGCTTGGATTATTGGGTATAAGGCATGGGGAGCACTTTTAGGACTGCAGTTGGCAGAGAGAGACGTCATTGTAGCCTCAATTGACTATAAAAACTTCCCTCAGGGTACAATCAGTGACATGGTGAGAGATGTTTCTCAAGGGATTTCATTTGTATGCAAGAATATAGCAGACTATGGAGGAGATCAAGACAGAATCTTTCTGATGGGACAATCAGCTGGTGCACATATTTCCGTTTGTGCCCTCTTGGAGCAAGCAATCAAAGAAGCCAGAAAAGAAGAGAGTGTAGATTGGAGTGTCTCCCAAATAAAAGCTTATTTTGGTTTATCTGGAGGGTATAACTTGTTGAAACTAGTTGATCACTTTGATAGTCGGGGTTTATACCGTTCCGTCTTTTTGAGTATAATGGAAGGTGAAGAATCTTTGTCCCAATTTTCCCCGGAAATAAGAATCCAAGATCCAAGCATTAGTGATGTTGTACCCAGTTTACCTCCTTTTGTTCTTTTCCATGGCACTGGTGATTATTCAATCCCATCAGATGCCAGTGAAACTTTTGTGGAGACACTTCGTAAAGCAGGTGTACAAGCTGACCTCTTTCTCTATGAGGGAAAAACTCATACAGATTTGTTCCTTCAAGATCCCTTTAGGGGAGGCGGTTATGAACTTTTTGATCAAATAGTTGCCATATTACATGCTGGTGATGAGGAAGCCCTCGCAAAGGATTCAATGGCGCCTCCAAAACCGCGCCTTGTTCCAGAGATTTTGATAAGATTGGCACGAATGGTTAGCCCTTTCTGA 1281 44.42 MAAPADRLRPVVKFSSQGIRFDEDSAETRPLLSRMLNYPIGIIHHQLRRRLGAGKPQVPGRQQSFSRDLGHAAAETLLITRLSFTLLRSLGVGYRWVVKLTALAVYAILLMPGFLQVMYDYYFSSQVRRDIIYGYQPRNSLDLYLPTNTDKKKPVVIFVSGGAWIIGYKAWGALLGLQLAERDVIVASIDYKNFPQGTISDMVRDVSQGISFVCKNIADYGGDQDRIFLMGQSAGAHISVCALLEQAIKEARKEESVDWSVSQIKAYFGLSGGYNLLKLVDHFDSRGLYRSVFLSIMEGEESLSQFSPEIRIQDPSISDVVPSLPPFVLFHGTGDYSIPSDASETFVETLRKAGVQADLFLYEGKTHTDLFLQDPFRGGGYELFDQIVAILHAGDEEALAKDSMAPPKPRLVPEILIRLARMVSPF 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15152862 15159007 + CcPI632755_05g013900.1 Cco05g1390 179018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g1390 426 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 59 391 IPR050300 GO:0016298(PANTHER)
Cco05g1390 426 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 123 375 - -
Cco05g1390 426 Pfam BD-FAE 141 350 IPR049492 -
Cco05g1390 426 Gene3D alpha/beta hydrolase 120 374 IPR029058 -
Cco05g1390 426 SUPERFAMILY alpha/beta-Hydrolases 106 388 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g1390 Cco-Chr5:15152862 Cco05g2584 Cco-Chr5:34091092 5.20E-135 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g1390 K15889 - csv:101206540 639.032