Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco05g1465 | ATGGCCATCTCTGAAACTCAGTTCCCTTCTTCTCTCATCCCTAATTTCCTCTACTCCTCTTCTGCCATTCCATTCCACAAGATTTTCCGCTCCAATCTTCCTTCTGAATCGCCATCTCCCAGCCTCGAATCCTCCCCTTCGATGAAGGCCTTCGCGGTTCCTTCTCCCACTGAACCGCGCAAGAAATTGGAGATGTATTCGCCGGCTTTCTACGCCGCCTGTGCCGTCGGTGGAAGCCTCAGCTGCGGTCTCACTCACATGACCGTCACTCCGCTCGATCTCGTCAAGTGTAATATGCAGATTGACCCGGTGAAATACAAGAGCATTTCATCTGGTTTTGGAATTTTGCTAAAGGAGCAAGGAATCAGGGGGCTGTTTAGGGGTTGGGCGCCAACTCTACTAGGTTACAGTGCTCAGGGTGCTTGCAAGTATGGCATCTACGAATTCTTTAAGAAATACTATTCCGATATAGTCGGTCCTGAGTATGCAGCAAAGTACAAGACATTGATCTATCTTGCTGGTTCTGCATCTGCTGAAGTGATTGCAGATGTTGCACTTTGCCCCTTTGAAGCTGTTAAAGTTAGAGTTCAGACACAGCCAGGTTTTGCTAGAGGTTTGTCAGATGGCCTTCCTAAATTTGTTAGATCGGAAGGTGCTCTTGGGTTGTATAAGGGTATTGTTCCTCTGTGGGGACGTCAGATCCCATATACAATGATGAAGTTTGCAACATTTGAGAACCTGGTGGAACTCATATACAAGCATGTCATCCCCAAGCCAAAGAACGAATGCAGCAGCGCCTTGCAGCTCGGCGTCAGTTTTGCTGGTGGATATATTGCCGGTGTTTCTTGTGCTATAGTTTCTCATCCTGCGGATAATCTTGTCTCCTTTCTCAATAATGCTAAAGGGGCTACCGTTGGTGAGGCAGTTCAGAAGCTTGGATTATGGGGTCTCTTCACACGAGGGCTGCCTCTACGCATAGTGATGATTGGAACCCTCACTGGAGCTCAGTGGGTTATCTATGACGCATTCAAAGTTTCTGTGGGATTGCCAACTACCGGTGGGGTTGCCCCTCCCATTGCTGCATCCCCAGAGCATACAACTGCGAGTGCGTAG | 1113 | 48.52 | MAISETQFPSSLIPNFLYSSSAIPFHKIFRSNLPSESPSPSLESSPSMKAFAVPSPTEPRKKLEMYSPAFYAACAVGGSLSCGLTHMTVTPLDLVKCNMQIDPVKYKSISSGFGILLKEQGIRGLFRGWAPTLLGYSAQGACKYGIYEFFKKYYSDIVGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFATFENLVELIYKHVIPKPKNECSSALQLGVSFAGGYIAGVSCAIVSHPADNLVSFLNNAKGATVGEAVQKLGLWGLFTRGLPLRIVMIGTLTGAQWVIYDAFKVSVGLPTTGGVAPPIAASPEHTTASA | 370 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 17548102 | 17553278 | + | CcPI632755_05g014650.1 | Cco05g1465 | 179093 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco05g1465 | 370 | Gene3D | Mitochondrial carrier domain | 70 | 352 | IPR023395 | - | |
Cco05g1465 | 370 | PANTHER | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED | 46 | 356 | IPR044677 | GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro) | |
Cco05g1465 | 370 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 69 | 153 | IPR018108 | - | |
Cco05g1465 | 370 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 166 | 250 | IPR018108 | - | |
Cco05g1465 | 370 | Pfam | Mitochondrial carrier protein | 167 | 254 | IPR018108 | - | |
Cco05g1465 | 370 | Pfam | Mitochondrial carrier protein | 71 | 155 | IPR018108 | - | |
Cco05g1465 | 370 | SUPERFAMILY | Mitochondrial carrier | 71 | 342 | IPR023395 | - | |
Cco05g1465 | 370 | FunFam | Phosphate carrier protein, mitochondrial | 69 | 347 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g0817 | Cco-Chr1:8586453 | Cco05g1465 | Cco-Chr5:17548102 | 2.40E-165 | dispersed | |
Cco02g0352 | Cco-Chr2:3207823 | Cco05g1465 | Cco-Chr5:17548102 | 2.70E-85 | dispersed | |
Cco05g1465 | Cco-Chr5:17548102 | Cco06g2028 | Cco-Chr6:30258230 | 3.80E-150 | dispersed | |
Cco05g1465 | Cco-Chr5:17548102 | Cco05g2345 | Cco-Chr5:31967542 | 2.50E-08 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco05g1465 | K15102 | - | csv:101203018 | 656.366 |