Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g1513 ATGCCAAGCGTGGCTGTGAAGCTCTACAGCGTCTTCTTCAAGTTTCTCTTGAAGCATCGTCTGCAGAATCTGATCCAAGCTCCACTTGACGAATCGAGCCCTTTTGGAGTCACATCTCGACCCGAAGAAACGGTTGCTTCCGCTAATCCTTTGTTCACCGACGGCGTCGCTACCAAGGATATCCACATCGATCCGTTTACATCTCTGAGCATTCGGATCTTCCTCCCTGAATCTGCTCTTACTCCGCCTGAAACCGACTCCAAACCCTCTTCCAAATCGTCCAAGCCTAAACCTAAACGGTCCAATCAAGATGCTCAAACCGATCTTGTTAATCACAATGTGAATAATGTACAACAGTACCCTTCTCGTCGAAATAGCTATGGCCCTTCGGGAAATACCAGGGAAGAACTGCGGGGTAGTAGATTAGGGGGTTACAGTAATGAAATGGAGGGGTTGAATTTGATTCAAGGCCCTGCCCCTGGTGGCGTTTACAGAGGCTATGCGCCGGTGACGGAGAATAGTCGAAGGTTGCCGGTGATGTTGCAATTTCATGGCGGGGGGTGGGTTAGTGGGAGCAATGATTCGGCGGCCAATGATTTCTTTTGCCGGAGGATCGCAAAATTGTGCGATGTTATTGTCGTTGCCGTCGGGTATCGGCTTGCACCGGAGAACCGATTTCCGGCTGCGTTTGAGGATGGATTGAAGGTGTTGAATTGGTTGGGTAAGCAGGCCAATTTGGCCGAGTGCAGCAAGTCTATGGGGAATACCAAAGGCAATGGCAATGAGTTTAAGAAATCGGATAATCATAGGCATATTGTTGACACATTTGGTGCGTCAATGGTAGAGCCTTGGTTGGCAGCCCATGGAGACCCAACAAGATGTGTTCTTCTTGGGGTTAGCTGTGGAGCAAATGTTGCAGATTATGTGGCTCGAAAGGCTGTGGAGGCCGGTAAGCTCTTGGACCCTGTCAAGGTTGTTGCCCAGGTTCTCCTGTACCCGTTTTTCGTTGGGAGTGTCCCCACTCATTCAGAGTTGAAGCTGGCCAATTCGTATTTTTATGACAAAGCTATGTGCCTTCTTGCTTGGAAGCTATTCCTACCCGAGGAAGAGTTTAGTCTTGACCATCCAGCTGCAAACCCCCTTGTTTCTGGTAGAGAAGGCCCACCTCTAAAGCTCATGCCGCCAACGCTGACAGTTGTGGCTGAACTCGACTGGATGAGAGACCGAGCCATAGCTTACTCTGAAGAACTTCGAAAGGTAAATGTCGATGCACCTGTTCTTGACTACAAGGATGCAGTGCATGAATTTGCGACCCTCGATATTCTTCTCAAGACACCTCAAGCCCAAGCTTGTGCAGAGGACATTGCCATCTGGGTCAAAAAATATATTTCACTACGAGGCCACGAGTTCTCTTATTGA 1419 49.05 MPSVAVKLYSVFFKFLLKHRLQNLIQAPLDESSPFGVTSRPEETVASANPLFTDGVATKDIHIDPFTSLSIRIFLPESALTPPETDSKPSSKSSKPKPKRSNQDAQTDLVNHNVNNVQQYPSRRNSYGPSGNTREELRGSRLGGYSNEMEGLNLIQGPAPGGVYRGYAPVTENSRRLPVMLQFHGGGWVSGSNDSAANDFFCRRIAKLCDVIVVAVGYRLAPENRFPAAFEDGLKVLNWLGKQANLAECSKSMGNTKGNGNEFKKSDNHRHIVDTFGASMVEPWLAAHGDPTRCVLLGVSCGANVADYVARKAVEAGKLLDPVKVVAQVLLYPFFVGSVPTHSELKLANSYFYDKAMCLLAWKLFLPEEEFSLDHPAANPLVSGREGPPLKLMPPTLTVVAELDWMRDRAIAYSEELRKVNVDAPVLDYKDAVHEFATLDILLKTPQAQACAEDIAIWVKKYISLRGHEFSY 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18648659 18651745 - CcPI632755_05g015130.1 Cco05g1513 179141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g1513 472 MobiDBLite consensus disorder prediction 79 143 - -
Cco05g1513 472 SUPERFAMILY alpha/beta-Hydrolases 164 463 IPR029058 -
Cco05g1513 472 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 180 196 IPR002168 GO:0016787(InterPro)
Cco05g1513 472 Pfam alpha/beta hydrolase fold 180 437 IPR013094 GO:0016787(InterPro)
Cco05g1513 472 PANTHER ARYLACETAMIDE DEACETYLASE 47 441 IPR050466 -
Cco05g1513 472 MobiDBLite consensus disorder prediction 103 133 - -
Cco05g1513 472 Gene3D alpha/beta hydrolase 35 467 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g1513 Cco-Chr5:18648659 Cco11g0819 Cco-Chr11:9504666 1.40E-32 dispersed
Cco05g1513 Cco-Chr5:18648659 Cco02g2556 Cco-Chr2:37895243 1.90E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g1513 - - - 0.0