Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco05g1671 | ATGGGTAAATTAGGGTTTGCGTTTGGGGGTTTGATTTGTGCGATGATGTTATTGCAGAAAAGTGAGGGCACTGAGTTCATAGTTGGAGGAGCAAAGGGATGGGATGTTTCGGTGGCAAAAAGCTATAATCAATGGGCAGAAGCAAGCAGGTTTCAAATTGGAGACTCTTTAGTTTTCAACTATGATGCTGGCCAAGACTCAGTGCTTCAAGTAACCCAAGATGACTACACCAATTGCAACATCCAATCTCCAATTAAACACTATTCTGATGGCCATTCTGTTTTCCAATTTGACAAATCTGGGCCTTACTATTTTGTCAGTGGAAACAAAGACAATTGCCTTAAAAATGAGAAGCTTGTGGTGATTGTGTTGGCTGATAGAAGCAATTCGAGTTCTAATCAAACCACCACTTCTCCTCCAATCTCTGCTCCATCTCCATCTCCCACAAATTCATCTGAGACAACACCTTCTCCTGCACCAGCAAATGATCAAACTAGTGCACCTTCTCCTCCTCCGTCGGGGTCAGCTGAATTCAACCCATCTCCGCCACCTGCTGAAGTCAATCCCTCAACCCCACCTACTGGTGAAGAGTCTCCATCTCCCTCTGCAGGGACGGTTGAGATTAACCCTGCACCTCCTGTATCAGGGCCACCACCCAGTTTCGGATATTCGATCATCCCGGGTAGTATTGGCTCCATTGGAGCGTTTGTTGCTGCTGTTATCTTAGGTTTCTAA | 735 | 45.58 | MGKLGFAFGGLICAMMLLQKSEGTEFIVGGAKGWDVSVAKSYNQWAEASRFQIGDSLVFNYDAGQDSVLQVTQDDYTNCNIQSPIKHYSDGHSVFQFDKSGPYYFVSGNKDNCLKNEKLVVIVLADRSNSSSNQTTTSPPISAPSPSPTNSSETTPSPAPANDQTSAPSPPPSGSAEFNPSPPPAEVNPSTPPTGEESPSPSAGTVEINPAPPVSGPPPSFGYSIIPGSIGSIGAFVAAVILGF | 244 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 23476241 | 23478057 | - | CcPI632755_05g016710.1 | Cco05g1671 | 179299 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco05g1671 | 244 | MobiDBLite | consensus disorder prediction | 128 | 222 | - | - | |
Cco05g1671 | 244 | MobiDBLite | consensus disorder prediction | 163 | 196 | - | - | |
Cco05g1671 | 244 | PANTHER | BLUE COPPER PROTEIN | 19 | 153 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) | |
Cco05g1671 | 244 | SUPERFAMILY | Cupredoxins | 23 | 124 | IPR008972 | - | |
Cco05g1671 | 244 | PRINTS | Proline rich extensin signature | 156 | 172 | - | - | |
Cco05g1671 | 244 | PRINTS | Proline rich extensin signature | 192 | 213 | - | - | |
Cco05g1671 | 244 | PRINTS | Proline rich extensin signature | 138 | 150 | - | - | |
Cco05g1671 | 244 | PRINTS | Proline rich extensin signature | 180 | 192 | - | - | |
Cco05g1671 | 244 | Pfam | Plastocyanin-like domain | 34 | 115 | IPR003245 | GO:0009055(InterPro) | |
Cco05g1671 | 244 | Gene3D | - | 24 | 137 | IPR008972 | - | |
Cco05g1671 | 244 | MobiDBLite | consensus disorder prediction | 147 | 162 | - | - | |
Cco05g1671 | 244 | CDD | OsENODL1_like | 24 | 124 | IPR041846 | - | |
Cco05g1671 | 244 | ProSiteProfiles | Phytocyanin domain profile. | 24 | 125 | IPR003245 | GO:0009055(InterPro) | |
Cco05g1671 | 244 | FunFam | Early nodulin-like protein 1 | 23 | 128 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco05g1671 | Cco-Chr5:23476241 | Cco10g0526 | Cco-Chr10:6272223 | 6.50E-42 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco05g1671 | - | - | - | 0.0 |