Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g1671 ATGGGTAAATTAGGGTTTGCGTTTGGGGGTTTGATTTGTGCGATGATGTTATTGCAGAAAAGTGAGGGCACTGAGTTCATAGTTGGAGGAGCAAAGGGATGGGATGTTTCGGTGGCAAAAAGCTATAATCAATGGGCAGAAGCAAGCAGGTTTCAAATTGGAGACTCTTTAGTTTTCAACTATGATGCTGGCCAAGACTCAGTGCTTCAAGTAACCCAAGATGACTACACCAATTGCAACATCCAATCTCCAATTAAACACTATTCTGATGGCCATTCTGTTTTCCAATTTGACAAATCTGGGCCTTACTATTTTGTCAGTGGAAACAAAGACAATTGCCTTAAAAATGAGAAGCTTGTGGTGATTGTGTTGGCTGATAGAAGCAATTCGAGTTCTAATCAAACCACCACTTCTCCTCCAATCTCTGCTCCATCTCCATCTCCCACAAATTCATCTGAGACAACACCTTCTCCTGCACCAGCAAATGATCAAACTAGTGCACCTTCTCCTCCTCCGTCGGGGTCAGCTGAATTCAACCCATCTCCGCCACCTGCTGAAGTCAATCCCTCAACCCCACCTACTGGTGAAGAGTCTCCATCTCCCTCTGCAGGGACGGTTGAGATTAACCCTGCACCTCCTGTATCAGGGCCACCACCCAGTTTCGGATATTCGATCATCCCGGGTAGTATTGGCTCCATTGGAGCGTTTGTTGCTGCTGTTATCTTAGGTTTCTAA 735 45.58 MGKLGFAFGGLICAMMLLQKSEGTEFIVGGAKGWDVSVAKSYNQWAEASRFQIGDSLVFNYDAGQDSVLQVTQDDYTNCNIQSPIKHYSDGHSVFQFDKSGPYYFVSGNKDNCLKNEKLVVIVLADRSNSSSNQTTTSPPISAPSPSPTNSSETTPSPAPANDQTSAPSPPPSGSAEFNPSPPPAEVNPSTPPTGEESPSPSAGTVEINPAPPVSGPPPSFGYSIIPGSIGSIGAFVAAVILGF 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 23476241 23478057 - CcPI632755_05g016710.1 Cco05g1671 179299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g1671 244 MobiDBLite consensus disorder prediction 128 222 - -
Cco05g1671 244 MobiDBLite consensus disorder prediction 163 196 - -
Cco05g1671 244 PANTHER BLUE COPPER PROTEIN 19 153 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cco05g1671 244 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Cco05g1671 244 PRINTS Proline rich extensin signature 156 172 - -
Cco05g1671 244 PRINTS Proline rich extensin signature 192 213 - -
Cco05g1671 244 PRINTS Proline rich extensin signature 138 150 - -
Cco05g1671 244 PRINTS Proline rich extensin signature 180 192 - -
Cco05g1671 244 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055(InterPro)
Cco05g1671 244 Gene3D - 24 137 IPR008972 -
Cco05g1671 244 MobiDBLite consensus disorder prediction 147 162 - -
Cco05g1671 244 CDD OsENODL1_like 24 124 IPR041846 -
Cco05g1671 244 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055(InterPro)
Cco05g1671 244 FunFam Early nodulin-like protein 1 23 128 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g1671 Cco-Chr5:23476241 Cco10g0526 Cco-Chr10:6272223 6.50E-42 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g1671 - - - 0.0