Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco05g1784 | ATGCAAACCATTTCTTTATTTGTCTTTTTGGTTTTGGTTCTTTCCGAAAATGCTAAAATAGCTGAAGCTGCTGAAGGTGGAAAAAATGGCGTTTATATTGTCTACATGGGATCCGCGTCTGCCTCCACGACTGACTTCCTTCGGCTTCTTACCTCTGTCAACAGGCGAAACGAAGTGGTACACATATATAAACATGGGTTCATAGGATTTGCAGCTCGTCTGTCAGAACAGGAAGCCCATGCCATGAGACAAAGCCCTGGAGTTGTTTCGGTTTTTCCAGATCCAATATTGAAGTTGCACACAACTCATTCATGGGATTTCTTGGTTAGTCAGACTAGCGTCAAAATCGACGCCAATCCCAAATCAGATCCCCCAACCTCTTCCTCTCAACAATATGATACCATTATCGGCATCTTGGACACTGGTATCTGGCCAGAATCGGAAAGTTTTAGTGACAAGGGTATGAGCCCAATACCGTCGAGGTGGAAAGGTACCTGCATGGTTGGCGATGACTTCACTTCCACCAACTGTAACAGAAAAATCATTGGAGCAAGATTTTACGAAAGTTCAGACAGCGACGGGACAAGGTACCACTCACCTCGAGACGGTGCTGGACATGGCACCCACGTTGCATCAACGGCGGCCGGCAGCGCCGTGGCTAATGCATCATACTATGGCCTCGCAGAAGGGACGGCCAAGGGCGGGTCCCCCGGCTCAAGGATCGCCATGTACAGAGTCTGCGTGGCCGACGGCTGTCATGGGTCGTCAATCATGAAGGCCTTTGATGATGCCATCGCCGATAGGGTCGATGTATTGTCCTTATCTCTCGGGGCACCCTCCTACGTCAAACCAGAGTTGACGGCCGACCCTATTGCCATCGGAGCCTTTCATGCAGTTGAGAAGGGGATTACAGTTGTCTGCTCCGCTGGAAACGACGGCCCCACTTCGGGATCGGTGGTTAACGACGCACCGTGGATAATAACAGTGGCTGCCTCCACCATTGATAGGGATTTTGAGTCTGATGTTGTGTTGGGCAACAAAAAAGTGATCAAGGGAGAAGGTATAAATTTCTCTGCTCTTCAAAAGTCTCCTGTATACCCACTGATACAAGGCAAGTCAGCCAAGAAAGCGAGTGCCAGTGAAGACAGTGCAAGGATTTGTTCTGAAGACTCCATGGACGAAGCTCTAGTGAAGGGGAAGATAGTTATTTGCGAAAACAGTTTCGAAGGAGGCGGTTCTGATTGGCAAGGTCAGGCTGAAACAGTGAAGAATCTTGGAGGGGTCGGGGTAGTTTTGATTGATGACAACTCAAAATTAGTTGCAGAGAAATTTCCTTCTCCCATGACAGTTATTAGCAAAAAGGATGGTGCTGAGGTCCTCTCCTATGTTAAATCAAGCAGGAATCCAGTTGCTACAATCCTGCCCACTGTGACCATAATAAACTATAAGCCAGCGCCTGCTATAGCATACTTTTCATCCCGAGGGCCTAATCTCGCAGTATTAAACCTGATTAAGCCGGACATATCAGCACCAGGAGTGAATATTCTTGCAGCCTGGCTTGGCAATGATTCAAGCTCTACTCCACAAGCAACAAAGTCACCACTCTTCAATGTGATCTCAGGAACTTCAATGTCCTGCCCGCATGTCTCTGGCGTAGTGGCCTATGTAAAATCTCAAAACCCTACATGGAGTCCCTCAGCAATTAAATCGGCCATCATGACCACAGCAATTCAAACAAATAACTTGGGATCGCCAATGACTTTGGATACGGGATCAATAGCCACACCTTATGATTATGGGGCAGGAGAAATATCAACCAACGGAGCATTACAACCAGGACTAGTTTATGAAACTAGTACAACAGACTACTTAAACTACCTTTGCGGCCGAGGTTATAACCGGTCCACCATTAAGAGCATCTCAACTACTGTTCCTGATGGGTTTGATTGCCCCAAGAACTCAACTGTAGACTACATATCCAACATGAACTACCCATCAATTGCAGTATCCGAATTGAAAGGCAAGGAAAGCAAGAAAGTAACAAGAACGGTTACGAATGTTGGTGGTGCTGGTGAAACAGTTTACACAGTCAGCATAGACGCACCTGAGGAAGTAGATGTCAAAGTGATTCCAGAGAAATTGAAATTTGGAAAGAACAATGAGAAGCAGAGTTACCAAGTGGTTTTCACCCCAACTGTACCCACACTGCAGAAAGAAGTCCCTGGTTCAATAACTTGGACCAATGGAAAACATCAAGTCCGGAGTCCATTTGTCGTCACTAGTAAGAGTAGTGAGTCATAA | 2301 | 46.59 | MQTISLFVFLVLVLSENAKIAEAAEGGKNGVYIVYMGSASASTTDFLRLLTSVNRRNEVVHIYKHGFIGFAARLSEQEAHAMRQSPGVVSVFPDPILKLHTTHSWDFLVSQTSVKIDANPKSDPPTSSSQQYDTIIGILDTGIWPESESFSDKGMSPIPSRWKGTCMVGDDFTSTNCNRKIIGARFYESSDSDGTRYHSPRDGAGHGTHVASTAAGSAVANASYYGLAEGTAKGGSPGSRIAMYRVCVADGCHGSSIMKAFDDAIADRVDVLSLSLGAPSYVKPELTADPIAIGAFHAVEKGITVVCSAGNDGPTSGSVVNDAPWIITVAASTIDRDFESDVVLGNKKVIKGEGINFSALQKSPVYPLIQGKSAKKASASEDSARICSEDSMDEALVKGKIVICENSFEGGGSDWQGQAETVKNLGGVGVVLIDDNSKLVAEKFPSPMTVISKKDGAEVLSYVKSSRNPVATILPTVTIINYKPAPAIAYFSSRGPNLAVLNLIKPDISAPGVNILAAWLGNDSSSTPQATKSPLFNVISGTSMSCPHVSGVVAYVKSQNPTWSPSAIKSAIMTTAIQTNNLGSPMTLDTGSIATPYDYGAGEISTNGALQPGLVYETSTTDYLNYLCGRGYNRSTIKSISTTVPDGFDCPKNSTVDYISNMNYPSIAVSELKGKESKKVTRTVTNVGGAGETVYTVSIDAPEEVDVKVIPEKLKFGKNNEKQSYQVVFTPTVPTLQKEVPGSITWTNGKHQVRSPFVVTSKSSES | 766 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 26485470 | 26489993 | + | CcPI632755_05g017840.1 | Cco05g1784 | 179412 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco05g1784 | 766 | SUPERFAMILY | Subtilisin-like | 131 | 614 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco05g1784 | 766 | Pfam | Subtilase family | 134 | 585 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cco05g1784 | 766 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 541 | 551 | IPR023828 | - | |
Cco05g1784 | 766 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 15 | 100 | IPR037045 | - | |
Cco05g1784 | 766 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 104 | 610 | - | - | |
Cco05g1784 | 766 | ProSitePatterns | Serine proteases, subtilase family, histidine active site. | 206 | 216 | IPR022398 | - | |
Cco05g1784 | 766 | FunFam | subtilisin-like protease SBT1.5 | 335 | 480 | - | - | |
Cco05g1784 | 766 | PRINTS | Subtilisin serine protease family (S8) signature | 131 | 150 | IPR015500 | - | |
Cco05g1784 | 766 | PRINTS | Subtilisin serine protease family (S8) signature | 202 | 215 | IPR015500 | - | |
Cco05g1784 | 766 | PRINTS | Subtilisin serine protease family (S8) signature | 540 | 556 | IPR015500 | - | |
Cco05g1784 | 766 | CDD | PA_subtilisin_like | 341 | 473 | - | - | |
Cco05g1784 | 766 | Gene3D | - | 627 | 762 | - | - | |
Cco05g1784 | 766 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 31 | 758 | IPR045051 | - | |
Cco05g1784 | 766 | Pfam | Fibronectin type-III domain | 661 | 759 | IPR041469 | - | |
Cco05g1784 | 766 | CDD | Peptidases_S8_3 | 97 | 577 | IPR034197 | - | |
Cco05g1784 | 766 | Pfam | PA domain | 386 | 457 | IPR003137 | - | |
Cco05g1784 | 766 | FunFam | Subtilisin-like protease SBT1.5 | 133 | 345 | - | - | |
Cco05g1784 | 766 | Gene3D | Peptidase S8/S53 domain | 133 | 623 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco05g1784 | 766 | Gene3D | - | 335 | 480 | - | - | |
Cco05g1784 | 766 | Pfam | Peptidase inhibitor I9 | 31 | 100 | IPR010259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco05g1784 | Cco-Chr5:26485470 | Cco08g1223 | Cco-Chr8:23940209 | 7.60E-153 | dispersed | |
Cco05g1784 | Cco-Chr5:26485470 | Cco09g0103 | Cco-Chr9:902807 | 8.60E-149 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco05g1784 | K25898 | - | csv:101213415 | 1318.52 |