Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g2212 ATGGCGGTTGTCACTGATCCTCTTGCTTCCATGCAGCTTCTCGCCAATACCCTTCAGGCTCCGCCGTATGCGGCAGCCGCCGTTCTGGGTGGCATCTCTTTAATGCTTTCGGTGTTTCTTGTCGCTGATTGTAGAAAGAAACGTCGGAATTTTCTCCCTCCAGTGCCGGCGATTCCGGGGGTGCCGCTGTTGGGAAATCTGTTGCAGTTGAAGGAGAAGAAGCCTCACATGACGTTTGCACGGTGGGCCGAGACGTACGGTCCGGTTTATTCCATAAGAACCGGCGCTTCCAGTGTGATTGTTCTCAACACCGCCGAAGTTGCCAAAGAGGCTATGGTGACGAGATACGCTTCTATTTCTAGTAGAAAGCTAAGCAAAGCCCTCACCATCTTGACTGCTGATAAATGCATGGTTGCTATGAGTGATTACAATGACTTTCACAAGATGGTGAAGAGATACATATTGGCGAATGTCTTGGGGGCTAACGCTCAGAAGAAACACAGACAAAGGAGAGACACCATGATAGAGAATATTTCTAGGGAGTTGTTTGCTCATCTGAAGGATTTTCCATCAGAAACTGTTAATTTTCGAAAAATCTTCGAAGCAGAACTCTTTCGACTGGCTCTTAAAGAAACACTTGGGAAAGATGTCGAGTCGATATATGTCGATGGGCTCGGTACGACATTGCCAAGGGAAGATCTGTTTAGGGTTTTAGTGATTGATCCAATGGAGGGTGCAATTGAGGTTGATTGGAGGGATTTCTTCCCATATCTGAGATGGATCCCCAACAAGAGTGTGGAGAATAGAATAAAGAACATGGATTTTCGAAGGCGAATGACAATGAAAAGCCTACTTGAGGAGCAGAAGAAACGAATTGCAGCAGGGGAGGAAACGAATTGCTATGCTGATTTCCTGTTATCTGAAGCAACAACACTTACAGAGGATCAGATATCGATGTTACTTTGGGAGACAATCATTGAAACCTCAGACACGACTCTGGTTGTAACAGAATGGGCTATGTATGAACTTGCAAAAGATCCGAAACGACAGGATTATCTGTATCAGCATATACTGAATGTCTGTGGATCTGCAAAGCTTACTGAAGAAAACCTGTCACAGCTTCCATATCTAACTGCTGTTTTTCATGAAACTCTTCGGAGGCATAGTCCAGTCCCGGTCGTCCCATTGCGATACGCGCATGAAGATACCCAAATAGGCGGGTACTTTGTTCCTGCAGGGAGTGAGATCGCTGTGAACATTTACGCGTGCAACATGGACAAGAATCATTGGGAAAGCCCTGAGGAATGGAAGCCAGAGAGGTTTCTGGATGAGAAGTATGATCCAATGGATCTCCACAAAACCATGGCCTTTGGAGGAGGGAAGAGGGTGTGTGCAGGTGCTCTTAAGGCAATGCTGATAGCTTGCACAACCATTGGAAGGATGGTTCAAGAGTTTGAGTGGAGGCTAAGGGACGGGGAAGAGGACAAAGTGGACACTCTCGGCCTCACGGCTCGCAAGCTCCAGCCTCTGCACGTAGTCGTGAAGCCAAGAATCAACTAA 1560 46.86 MAVVTDPLASMQLLANTLQAPPYAAAAVLGGISLMLSVFLVADCRKKRRNFLPPVPAIPGVPLLGNLLQLKEKKPHMTFARWAETYGPVYSIRTGASSVIVLNTAEVAKEAMVTRYASISSRKLSKALTILTADKCMVAMSDYNDFHKMVKRYILANVLGANAQKKHRQRRDTMIENISRELFAHLKDFPSETVNFRKIFEAELFRLALKETLGKDVESIYVDGLGTTLPREDLFRVLVIDPMEGAIEVDWRDFFPYLRWIPNKSVENRIKNMDFRRRMTMKSLLEEQKKRIAAGEETNCYADFLLSEATTLTEDQISMLLWETIIETSDTTLVVTEWAMYELAKDPKRQDYLYQHILNVCGSAKLTEENLSQLPYLTAVFHETLRRHSPVPVVPLRYAHEDTQIGGYFVPAGSEIAVNIYACNMDKNHWESPEEWKPERFLDEKYDPMDLHKTMAFGGGKRVCAGALKAMLIACTTIGRMVQEFEWRLRDGEEDKVDTLGLTARKLQPLHVVVKPRIN 519
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 30863169 30865413 + CcPI632755_05g022120.1 Cco05g2212 179840
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco05g2212 519 SUPERFAMILY Cytochrome P450 53 517 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2212 519 Pfam Cytochrome P450 59 498 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2212 519 CDD CYP77_89 85 511 - -
Cco05g2212 519 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2212 519 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2212 519 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2212 519 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2212 519 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2212 519 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2212 519 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2212 519 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 23 517 IPR044225 GO:0005506(InterPro)|GO:0005783(PANTHER)|GO:0009686(PANTHER)|GO:0009686(InterPro)|GO:0009707(PANTHER)|GO:0010241(PANTHER)|GO:0010241(InterPro)|GO:0016709(PANTHER)|GO:0020037(InterPro)|GO:0052615(InterPro)
Cco05g2212 519 FunFam Ent-kaurene oxidase 2 46 519 - -
Cco05g2212 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco05g2212 519 Gene3D Cytochrome P450 45 519 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g2212 Cco-Chr5:30863169 Cco10g1624 Cco-Chr10:29607769 1.00E-52 dispersed
Cco05g2203 Cco-Chr5:30802713 Cco05g2212 Cco-Chr5:30863169 3.50E-37 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g2212 K04122 - csv:101209283 973.385