Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g2223 ATGCATTCGCAACAGAGATTCGGAAAGTCATGGACGGGAAGAAGTGTATTTGACTGGAGGAGAGTGCTTTGTAACTTGCTTTTGTTAATTAAATGGCACAATGCAATGCTTCTGATTATTGCGTGTTCCTTTGGTGTAACAATCATATCCTTCCAGCGGAACTGCATTTGGGTATTCAATTCAGCAATGTTTGGCGATACCGACTGTATCACCGGTCTAAGAACAATGGCTTCCTCTGTCTCATCTTCAGTTAGCAAGGAATTCCCCCGAGTAGTTAATCAACAGGAGAAAATCACCGCACCCTATGGCTCATGGAAGTCTCCGATCACCGCTGACGTTGTGTCCGGCGCCTCCAAACGAATCGAAGGTGCTGCCGTTGATGGTTCTGGTCGCCTTATCTGGCTTGAATCACGGCCCTCTGAATCTGGGCGGGAAGTTCTTGTCAAGGAACCGGAGAAGCTGGGCGATGAGATTATTGATATTACTCCAAAGGAGTTTTCAGTTCGGACCACTGCACATGAGTACGGTGGTGGTGCTTTCATGGTATCCGGGGACACTGTAGTCTTCTCTAATTTCGAGGACCAGAGATTATATAAGCAATCAGTTAAACCCCATGATTCTTCTCCCCGACCCCTTACTCCAGATTATGGTGGACCGTTAGTCAGTTATGCTGATGGAGTGTTTGATTTACGTCTCAATCGTTTTATCGCTGTACGGGAAGATCGGCGCAATATTAGCTCAAGTCCAACCGCGACCATTGTATCTATAGGACTTGAAGGGAAGGCTATAGAAGATCCAGAGGTACTTGTTGAGGGAAGTGACTTTTATGCTTTTCCTCGAGTGGATGCTGAAGGGAAACGGATTGCATGGATCCAATGGCATCACCCTAACATGTCATGGGATAAATCAGAGCTTTGGGTTGGTTACTTCTCTGAGAATGGTGAAATCGAAAAGTGTGTCTGTGTTGCTGGTTGTGATCCAGACCTAGTGGAGTCACCTACTGAGCCTAAGTGGTCCTCTGAGGGAGAACTTTATTTTGTTACTGATAGGAAAAATGGGTTCTGGAATCTATACAAATGGTTTGAGGCAGATAATGGGGTGTCTCCAGTTTATTCTTTGAATGCGGAGTTTTCGCGACCATGTTGGGTTTTTGGCATAAACTCTTACGGTTTCTTACCTGGCAATCGAGGAGAAAACTATGTACTTTGCAGCTATAGGCAGCATGGGAGGTCATATCTTGGAGTTCTGGGTGATGGACAAAGCTCTCCATCTCTTCTTGATATTCCCTTATCAGATATTGATAATATTACTATCGGGAAACATTGCTTTTATGTGGAGGGAGCGTCAGCCTTTCATCCACCATCAATTGCTAAGGTTACTCTAGACGCTGAAAACTTGAAAGTAGTTGAATTCACTATTATCTGGTCGTCATCGCCTGATATTTTGACTTATAAGTCATACTTCAGCACTCCAAAGTTAATTGAATTTGCAACAGAAGTGCCTGGTGAAAAGGCTTATGCCTATTTTTATCCACCATTCAATCCCATTTACCATTCTAGCGATGACGAAAAGCCTCCATTGTTGTTGGAAAGCCATGGAGGCCCGACGGATGAATCACGTGGAATATTAAATCTAAGAGTTCAGTATTGGACTAGTCGAGGATGGGCGTTTGTCAATGTCAACTATGGAGGAAGCTCTGGTTATGGGAGGGACTATCGAGAAAGGCTTTTGAGGAAATGGGGCATTGTTGATGTCAATGACTGTTGCAGTTGTGCACGATATTTGGTCCATTCGGGAGTAGTTGATGCAGAACGATTGTGCATTTCTGGGGAATCTGCTGGAGGATACACTGTCCTAGCTGCTCTTGCTTTCAGAGATACATTCAAGGCAGGAGCTTCCTTGTATGGTATAGCTGACTTGCAGATGTTGCGTGCTGGAATGCACAAATTTGAATCTTATTATATTGATAATCTTGTTGGAGGTGAAAGAGAATATTATGAAAGGTCGCCAATTAATTTTGTTGAAAAATTTTCTTGTCCATTAATCTTGTTCCAGGGATTGGATGACAAAGTTGTGCCTCCTACTCAAGCCCGTAAGATCTACGAAGCACTGAAAGAGAAGGGCCTCCCTGTTGCTTTAATTGAATACGAAGGAGAACAACACGGCTTTCGCAAGGCCGAGAATATAAAATTTACATTGGAACAACAAATGCTGTTCTTTGCAAGATTGGTCGGACGCTTTGAGGGTTTCCTGCTAGGGCTTCATTGTTCTTCCAAGCGACTTACCGATGCTTCCATCGACTGCAAGCGCCTTATCTGGCTCGAATCGTCGCTTTCCTTACTCGGATGA 2349 44.1 MHSQQRFGKSWTGRSVFDWRRVLCNLLLLIKWHNAMLLIIACSFGVTIISFQRNCIWVFNSAMFGDTDCITGLRTMASSVSSSVSKEFPRVVNQQEKITAPYGSWKSPITADVVSGASKRIEGAAVDGSGRLIWLESRPSESGREVLVKEPEKLGDEIIDITPKEFSVRTTAHEYGGGAFMVSGDTVVFSNFEDQRLYKQSVKPHDSSPRPLTPDYGGPLVSYADGVFDLRLNRFIAVREDRRNISSSPTATIVSIGLEGKAIEDPEVLVEGSDFYAFPRVDAEGKRIAWIQWHHPNMSWDKSELWVGYFSENGEIEKCVCVAGCDPDLVESPTEPKWSSEGELYFVTDRKNGFWNLYKWFEADNGVSPVYSLNAEFSRPCWVFGINSYGFLPGNRGENYVLCSYRQHGRSYLGVLGDGQSSPSLLDIPLSDIDNITIGKHCFYVEGASAFHPPSIAKVTLDAENLKVVEFTIIWSSSPDILTYKSYFSTPKLIEFATEVPGEKAYAYFYPPFNPIYHSSDDEKPPLLLESHGGPTDESRGILNLRVQYWTSRGWAFVNVNYGGSSGYGRDYRERLLRKWGIVDVNDCCSCARYLVHSGVVDAERLCISGESAGGYTVLAALAFRDTFKAGASLYGIADLQMLRAGMHKFESYYIDNLVGGEREYYERSPINFVEKFSCPLILFQGLDDKVVPPTQARKIYEALKEKGLPVALIEYEGEQHGFRKAENIKFTLEQQMLFFARLVGRFEGFLLGLHCSSKRLTDASIDCKRLIWLESSLSLLG 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30976758 30987987 + CcPI632755_05g022230.1 Cco05g2223 179851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g2223 782 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 94 747 IPR050585 -
Cco05g2223 782 Gene3D alpha/beta hydrolase 483 747 IPR029058 -
Cco05g2223 782 SUPERFAMILY DPP6 N-terminal domain-like 179 405 - -
Cco05g2223 782 Pfam Prolyl oligopeptidase family 545 744 IPR001375 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco05g2223 782 SUPERFAMILY alpha/beta-Hydrolases 500 743 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1713 Cco-Chr4:32264606 Cco05g2223 Cco-Chr5:30976758 1.30E-24 dispersed
Cco05g2223 Cco-Chr5:30976758 Cco05g2224 Cco-Chr5:30989875 9.30E-300 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g2223 - - - 0.0