Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g2224 ATGCTGGGACACCCAACCATAAAATCATTATTTCAATGCCATGAATTCAATAATGGGATGGAATCTCCCAGTTTCATTAAGCTTGAACTTGAGCTGCCGGGCAACAAGGTCGCTTCAATGAGTCTCTATGCTCTATTAGGACTTGTTCGCTTTTCTGCTCCATCGTCTTTTCTTATTTCCAATTTCAACTCCTTAAATAGAGCATTCATCAACCGAGTCTCTACTCGAACGCAGTTTCCAAGCTACACCACCATGGCTTCATCCATGTCTTCTTCGCCTAACACCAACAAAGACGTCCCAGAAGTAGCACAGCAGCTCCCCAAAATCACTGCGCCGTACGGCTCCTGGAAGTCGCCAATCACTGCTGACGTTGTTACTGGTGCCTCCAAGCGACTTGGTGGTACTGCTGTCGACGGTAATGGACACCTTATCTGGCTCGAATCCCGGCCTACCGAATCCGGGAGGGGAGTGCTTGTTAAGGAATCGGAAAATCCAGGGGATGTGCCTAGTGATATTACTCCAAAGGACTTTTCAGTGCGGAACACGACGCAGGAATACGGCGGTGGTGCGTTCACGGTGGCCGGAGACATCGTTGTCTTTTCGAATTACAAGGACCAAAGACTTTACAAGCAGTCTTTAAATTCAGATTCGCCTCCGGAAGCACTTACTCCCGATTACGGTGGACGATCAGTTAGTTATGCAGATGGGGTGTTCGATTCTCGTTTTAATCGTTTTATTACCGTCCAGGAAGATGGACGTCAAAGTAGCTTGAATCCAATCACCACAATTGTGTCAGTGGAACTTGACGGCAAGGTTATTAATGAACCGAAGGTCTTAGTTGGAGGAAATGATTTCTATGCCTTCCCACGATTGGATCCCAAAGGGGAACGGATTGCATGGATTGAGTGGGGTCATCCTAACATGCCTTGGGATAAATCTGAGCTCTGGGTTGGGTACCTTTCTGAGAATGGAGAGGTCTACAAACGAGTTTGTGTTGCTGGTGGTGATCCGAAGCTTGTTGAATCTCCTACTGAACCGAAGTGGTCTGCTCAGGGAGAACTATTCTTTATTACAGATAGACAAAGTGGGTTTTGGAATCTCTATAAATGGTTTGAGGCTGGCAATGAGGTGGCTCCAATATATTCTTTAAACGCTGAATTTTCCCGACCCTTGTGGATTTTTGGCACAAACTCTTATGAATTCTCAAGGACCGGTGTTGGGAAAAACATCATAGTCTGCAGCTACAGACAGCGTGGGCGATCATATCTTGGAGTTCTGGATGAGGCGCAAAGCTCACTATCCTTGCTTGATATCCCATTTACGGATATTGAAAATATTGCTCTGGGAAGTCAATGTATATATGTGGAAGGATCATCGACACTTCATCCACCATCTATTGCCAAGGTGACCCTGAATGAAAGAACCTTGGAAGTAGTAGGCTTCACTATTATCTGGTCATCTTCGCCGGATATTTTGAAATTTAAGTCGTACTTCAGCCTTCCTGAGTTTATTGAATTTCCAACTGAAGTTCCTGGCCGAAAGGCTTATGCTTACTTTTATCCACCGTCCAATCCTATATACCAGGCTAGTCAGGATGAAAAGCCCCCACTGTTGTTGAAAAGCCATGGAGGTCCAACTGCTGAAACACGTGGAAATTTAAATCCTAGCATTCAATATTGGACTAGTCGAGGCTGGGGTTATGTTGATGTAAATTATGGTGGTAGCACTGGTTATGGGAGAGAGTACCGAGAAAGGCTTTTGGGGCAGTGGGGAATTGTTGATGTCAATGACTGCTGCAGTTGTGCAAGATTTTTGGTGGACTCTGGAAAGGTTGATGGAGAACGATTGTGCATCACAGGGGGCTCTGCTGGGGGATATACCACCTTAGCTGCTCTTGCTTTTAAAGATATATTTAAGGCAGGAGCTTCCTTGTATGGGATAGCTGACTTACGCCTGTTGAGAGCAGATACGCACAAGTTTGAATCTCATTATATTGACAATCTTGTTGGGAATGAAGAAGATTACTTCGAGAAGTCACCAATCAATTTTGTTGACAAATTTTCTTGCCCTATAATCCTATTCCAGGGATTGGAGGACAAAGTCGTACTACCTAATCAAGCTCATAAGATATATCATGCATTGAAGGATAAGGGCTTGCCAGTTGCTTTGGTTGAGTATGAAGGAGAACAACATGGTTTCCGAAAGGCAGAAAATATCAAATTTACACTGGAACAACAAATGATGTTCTTTGCACGATTAGGATCTAACATGCTGACTAGTCGGGGTCATGTAAATTCATTTGGATTGTGTTGGGTTTCTTCCTACAAGTCCATTTATATACTCCGATGTCAAATACGAACTGTTAAGCATTTGAGCGATCTGGTGCTTGTTTCAAAAGACAGTTGGATGCCCCCAACAGCTGACTACTCCTTCCTACCTCAAAAATTTCGTGCCTACCACCTTCCTCGTGCATCCTATCACTTTTACGTCCTTTTCTCCAAAGTTACTTATGCTACACCCACTCTTGCCCTGTTTAGTGACAACAGCCTTCTTCAAGCATATGAAAACTTATCGGTTATTTCTGTGGACATCGCTTGCCTTGAGTTTCACCTGCGTCTCTGGTTGAACTTCCACATCTCCCGTGTTCGTTTGCAGTTCTTTTTATTAATTGTTGGAATAGTTAATTACACTCCTGGTCTCGTCTTCGTTCCTGGAATGACTGGGAGATGGAGAATATTGGTGTAG 2745 44.15 MLGHPTIKSLFQCHEFNNGMESPSFIKLELELPGNKVASMSLYALLGLVRFSAPSSFLISNFNSLNRAFINRVSTRTQFPSYTTMASSMSSSPNTNKDVPEVAQQLPKITAPYGSWKSPITADVVTGASKRLGGTAVDGNGHLIWLESRPTESGRGVLVKESENPGDVPSDITPKDFSVRNTTQEYGGGAFTVAGDIVVFSNYKDQRLYKQSLNSDSPPEALTPDYGGRSVSYADGVFDSRFNRFITVQEDGRQSSLNPITTIVSVELDGKVINEPKVLVGGNDFYAFPRLDPKGERIAWIEWGHPNMPWDKSELWVGYLSENGEVYKRVCVAGGDPKLVESPTEPKWSAQGELFFITDRQSGFWNLYKWFEAGNEVAPIYSLNAEFSRPLWIFGTNSYEFSRTGVGKNIIVCSYRQRGRSYLGVLDEAQSSLSLLDIPFTDIENIALGSQCIYVEGSSTLHPPSIAKVTLNERTLEVVGFTIIWSSSPDILKFKSYFSLPEFIEFPTEVPGRKAYAYFYPPSNPIYQASQDEKPPLLLKSHGGPTAETRGNLNPSIQYWTSRGWGYVDVNYGGSTGYGREYRERLLGQWGIVDVNDCCSCARFLVDSGKVDGERLCITGGSAGGYTTLAALAFKDIFKAGASLYGIADLRLLRADTHKFESHYIDNLVGNEEDYFEKSPINFVDKFSCPIILFQGLEDKVVLPNQAHKIYHALKDKGLPVALVEYEGEQHGFRKAENIKFTLEQQMMFFARLGSNMLTSRGHVNSFGLCWVSSYKSIYILRCQIRTVKHLSDLVLVSKDSWMPPTADYSFLPQKFRAYHLPRASYHFYVLFSKVTYATPTLALFSDNSLLQAYENLSVISVDIACLEFHLRLWLNFHISRVRLQFFLLIVGIVNYTPGLVFVPGMTGRWRILV 914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30989875 30998478 + CcPI632755_05g022240.1 Cco05g2224 179852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g2224 914 MobiDBLite consensus disorder prediction 155 174 - -
Cco05g2224 914 Pfam Prolyl oligopeptidase family 556 752 IPR001375 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco05g2224 914 SUPERFAMILY alpha/beta-Hydrolases 501 752 IPR029058 -
Cco05g2224 914 Gene3D alpha/beta hydrolase 494 758 IPR029058 -
Cco05g2224 914 SUPERFAMILY DPP6 N-terminal domain-like 187 416 - -
Cco05g2224 914 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 107 754 IPR050585 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g2223 Cco-Chr5:30976758 Cco05g2224 Cco-Chr5:30989875 9.30E-300 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g2224 - - - 0.0