Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco05g2347 | ATGCCGCCAGAACCTTTGCCGTGGGACAGGAAAGACCTCTTCAAGGAGAGGAAACACGAGAAGTCGGAGGCCATAGGGTCTGCGGCCAGATGGCGGGACTCTTATCATGGATCTCGCGAGTTCAATCGGTGGGGTTCTGCTGACTTTCGAAGACCTACTGGTCATGGTAAGCAGGGTAGTTGGCACCAGTTTTCTGAAGAATCTAGTCACGGTTATGGGCCTTCTCGGTCATTCAGTGACAGGGTGTTAGAAGATGAGAGCTTCCGGCCGTCAGTTCCTCGTGGAGATGGAAGATATATTAGAATCGGTAGAGAAATTAGAGGTTCTTTTAGTCATAGAGACTGGAGAAGTCACTCCAGGGAGACCAACAATGGATTTGGGAACCCATCGCGAAGGCCATCATCGGCATCGCAGGATGCAAGTTCTGATCAGAGGTCAGTAGATGATACGGTGACATATTCCTCTCCTCAATCTGTTCATGGGTTAGAAAATGGCCCGAGGGCCGATGTGGAAGTTTCCCTTGGCTCCACTGATTGGAAGCCACTTAAGTGGTCCCGATCTGGGAGTTTGTCTTCCCGGGGATCTGCTTACAGCAGTTCGACGAACTCGAAGAATGAAAAGGCTGATTTACCTCTTAGAGTTGCATCTCCTATAGAAAGCCCTTCTGCCGAAACTACTGCCTGTGTGACATCTTCTCTGCCTTCTGAAGATGCAATTTCTAGGAAGAAGCCAAGGCTTGGATGGGGTGATGGATTAGCCAAATACGAGAAAGAAAAAGTTGAGGTTCCTGATGGAAGCCTGAGAAAAGAAGTGGCTCTTCTTTCAAGCGCCAGTGCTGAATTAACTCATTCCCTTGGTTCAAACTTTGCTGAGAAAAGTCCCAAAACTTTGCCCTTTTCAGATTGTGCATCTCCTGCAACTCCATCCTCTTTTGCCTGCAGTTCATCATCAGGCTTGGAGGATAAAACATTTAGTAAGGGAGCAAGTGTGGATGGCATGATATGTAGTTCACCTGGGTCCAGTTCTCAAAATCTTCAGAAATTATTGTCTAGTATAGAAATGATGGAGTTCGGTTCAATTGCTAATTTAGGATCATCACTTGTCGAACTGTTTCATTCTGATGATCCGAGTACAGTAGAATCATGTTTTGGGAAGTCTACATTGAATAAGCTGCTAGCATATAAAGGTGAAATTTCAAAGAAATTGGAGACTACAGAGTCTGAAATTGATTCTCTTGAAAATGAACTTAAATCTTTGAAATCTGGAAATGGAGGCAATGTTTCTCATAAAAAATCTTGCAGCGTCACACATTTGGTGGAGAATGTGACATATTTCAAAGAACAAGATGGTGTCTCTTGTGTTGCCCCTCGTCCTGCTCCCTTGGTGATAGTTTCGTCTTCTGATGCAACAGTTGAGAAGATGCCAGTCTGCAAGGGTGACATGGGAGTTGAAGATGTTGATACAAAGGCTGATGAAATTGATAGTCCTGGAACTGTGACATCAAAATTTAACGAACCATCCCGAGTGGTAAAGACTCTTGCTTCTGATCTTGTGGTAAATGGTCATTGCTCTGAAGTTACAGATGTAATTGTCCCTGACAAGATGGAAGGGAATTTTCCCGTATCTAGGTCTTTTGTGGACAAACATAAAACAATTGGCTCTGACAATGAATGCATTCTTGCTAAGAGTTGTACCAAGGAATCTATTTATGGTGATTTGATGGCCCAAGCTGGCAGTAGATCATCTCTTTGTGATCAAATTTTTGTGTGTAATAAAGAATATGCAAGTAGAGCTGCAGAAGTAATTTTTAAGAAATTACCAGCGGAAATGTGCAAGATCAGCAGTAAAAGCACCAAAATTGTGTCCTGCTCAGAGATTGAGAAACTTGTTAAAGAGAAATTTCTAATGAGGAGGCAGTTCTTAAAATTTAAGGAGAGTGCATTAACCCTCAGATTTAAAGCCTTGCAACAATCGTGGAAAGAAGGTTTGCTGCATTCTGTGAAGAAATGTCGCTCAAGGCCACAAAAAAAGGAGTTGAGTCTAAGGGTGTCACATTCTGGCCATCAGAAGTACAGGTCTTCAACTCGCTCCCGTTTGGTTCAGCAAGGAGCATGTCAGAACCCTACCCTTAACACAGAAATTGCTGTTCGTTACTCCAGTAAGCTGCTGTTGAATCCTCAAATTAAGCTTTACAGGAATAGTTTAAAGATGCCAGCTATGATTTTGGACAAGAAGGAAAAGATGGCATTAAGGTTCATCTCTCATAATGGGTTGGTTGAAGATCCCTGTGCTGTTGAGAAGGAAAGGAACATGATAAACCCTTGGACTTCAGCCGAGAGAGAGATATTCTGGGAGAAACTATCCTTGTTTGGAAAGGATTTTAAGAAAATTTCTTCATTTCTCGACCTCAAAACCACAGCTGACTGTATCCAGTTCTATTACAAGAACCACAAATCTGATAGTTTTAAGAAGAATAAAAATTTGGAGTTGGGCAAGCAAGTGAAATCTTCTGCCATCACATACTTGGTTACATCAGGGAAAAAATGGAATCCAGACATGAATGCTACTTCCCTCGATATCTTAGGTGTTGCTTCAATAATGGCAGCACAAGCAGACTACGACATTGGAAACAAGCAAAAATGTACTCGCCATTTGGGTATGGGAAGGGATGTTGAGTCAAAAGTATCATGTAGTGCTAGCACTCCTTCAAATAAAAACAATTTGGATGCTCTTCAGACTGAAAAAGAAACGGTTGCTGCTGATGTGCTTGCTGGTATATGTGGTTCAATATCTTCGGAGGCCCTGAGTTCTTGCATTACAAGTGCTATTGATCCCAGTGAGGACCACCGGGAGCGGAAGTGTTATAAAGTGGATTCTGCAGTGAAATTGCCTTCGTTGTCTGACGTCATGCAGAAAACTGATAATGAGGAACCTTGTTCAGATGATAGTTCTGAGGATGTAGATTCTTCAAATTGGACAGATGAGGAGAAGTCGATATTCATGCAGGCTGTGTCGTCCTATGGTAAGGATTTTGATATGATCTCTAGATGTATCAGGTCAAAGTCTAGGGACCAGTGCAAGGTTTTCTTCAGCAAAGCTCGGAAATGCCTTGGACTGGATTTGATGCATACTTCTGGAGATGTAGGCGAAACACCTGGGAGTGGTAATGACGCCAGTGGGAGTGGGACTGACACAGAAGATCACTGTATTGTTGAAATCTGTGGAGCCCATGGCAGTGATGAATTTGTCTCCAAGTCAATCAACGGTGTATCAACATCTGTTAACATAAATCATGAAGAATCTGTTTCTGCTGTGACTGTCAACATGCGGACCAGTAGTGAATTTGAGGAAAGTACAGTATTGCAACAGTCGGATGAGAAATGTGCTGAGGCTGTTGGAAACTTGATGTCTGAGATATCGAAGGAAGAGGATTTGCCTAGTCCAGATTCCCATTCTGCCTACAATCTCACAAATGCAGCTGCTTCTTTGAGCCAGCCCGTGCATGACCACAAAATTGAAGGCTCTTCTGAAAATACCGAAGGTGGAAGCAAGTGCTGTAATGAACCTGACATTCTGAGATCTGAATCGGTCTCCACTGTTGATGAAAATTCAGCTGCTGTGAGCGAGAGCAGAGCTACAGCGAAGCTTGCATTTGGAGGAGAAGAAGAAGGAAGGAACACTAATTTACATGTTCAGAGTATATTGCAGTGCTCAGTTCAGGATTCAACTGGGTTTGATTCCAATCTTGCTTTAGAGGGCAGCTCCTTAGGACTTGATCCACAAATCTTGCATCCAACCGTTCTTAAAGTGGAACATGTAGAGAAGTCTTGTGTCGAGTCTGAGAACTCTCTTGCTGTCGGGAATTCTGATCCTGGTGTCATTGGAAGGGAACAGATGCTTAACCAAGATATGTTGTCATCAATAGCTGTCTTGCAGGAGGTTAGTGATGCGCATCAGAAGCCTATGAATAGAGATGACTATGCTGAGCATCAAAATAATTTCTCTCTCGATAGTGAATCCAAGTTTCCAAGAAGCTATCCTTTCAACAAACAAATCTTTGAGGACATCAATAGAAATATCAATCGCACATATTTTCCTGTTGTTCAAGGGCTGTCAAAGCCAGACATCAATTGTAACAGTTCATATGTTTCTGAGGGCCACTATCTTCAGAATTGTAACAGTTCCAAGCCGCACAACCCGGCTGAGCTTCCTTTTTTGCCTCAGAATATAGACTTGGGTCATGATCGTCAGAAGAAAGCTTTATGCAGTGGCAGTGCTTCAGATTCTGATGTTCCACGCAGGAAAGGTGATGTGAAACTGTTTGGTCAGATACTAAGTCATGCCCCTTCCAAGCAAAATTCGAGTTCTGGTTCGAACGAGGGTGGAGAGGAGAAGGGACTTCACAAATCCAGCAGCAAATCATGCGACATCGGAGAAAATGTTCCGTTAAGGAGTTACGGTTTTTGGGATGGAAGCAGAATACAGACGGGTTTGTCTGCTTTGCCGGATTCTGCCATTTTACAAGCCAAGTATCCTGCTGCATTCAGTGGCTACTCTGCTACGTCTGTTAAAACTGAACAGCAGCCATTGCAGGCACTCACAAATAATGGTGACCGAAGTCTTAATGGACTAGTGTCCGCATTTCCAACCAAGGATGGAGTGGTAGATTATCATTCGTATAGGAGTCGAGATGGAGTTAAGATGCGACCTTTCCCAGTTGATATATTTTCTGAGATGCAAAGAAGAAATGGCTTCGATGCTGTGTCCTTGTCAAGTTTACAGCAGCGGGGAAGGGTGCTAGTTGGAATGAATGTTGTTGGAAGGGGAGGGATTCTCATGGGTGGTTCTTGTACTGGTGTTTCAGATCCTGTAGCAGCCATTAAAATGCACTATGCCAAGGCCGAGCAATACGTTGGGCAACCTGGTAGTACATTCACTAGAGAAGATGGTAGTTGGAGAGGAGGTAATGGTGGAGATTTAGGCAGCAGGCATCAAGAAAAGAGTTGTAAATGTAACGACCAACGAGATGAAAACCAACCAATGGCTTATAGTTATGAGGTCGTGTCAACGGCGGAGCAAAAAGTTCCAATGCGCCTATCTGTATCAACATCATCGGCCTTCTTAAGATCCAGCAGTTATATCTGCTTTCTGAAACCAGACAAATCTAAGAAAAAATGGTTTCAAAAGGAGGAGAGTGTGGATGTGATTTCCTTTTTGGAACAATCTCCATTGGACGTTCCTGCACAACCTCCAATAGAAGATGATGTCAAACAAACCGAACCGGAGAATGAACCAAGCGAGCTTGCGCATTTGGAGGCTGCGGAGTCGGCTGTTGCTGAAGCTCAGCTGGCTGTGGTGGTTGAATATCCACCTAGTCCTATCTCCTGTCGGCCAGAAATGTCGGAGGAAACAGCAGCTAGTGTGATTCAAACTGCATTTCGTGGATATACGGCAAGGAGAGCATTGAGAGCTCTCAAAGCGTTGATGAGATTGAAGACATTGGTACAAGGGCAATCTGTCAAACGGCAAGTGGCCTCTACTTTAAAATGCATGCAAACCCTTACTCATTTACAGTCAGAGATTCGTGCAAGAAGAATAAGAATGTCGGAAGAAAATCAGGCTCTTCAGCGACAACTTCGTAACAAACGTGAGAAAGATCTCGAGAAGTTAAAATTTGCTATGGATGATGACTGGAATGATAGCACCCAATCTAAAGCACAAATTGAAGCTAAACTATTGAACAAGCATGAAGCTGCAATAAGAAGAGAAAGGGCTCTGGCTTATGCTTACTCTCATCAGCAAACATGGAAGAACTCTTCAAAAACTTCAACCCCCACTGTCATGGATCCAAACAATCCCCACTGGGGTTGGAGTTGGTTGGAGAGGTGGATGGCAGCTCGTCCATGGGAATCTCAAAGCACCACTGATCAGCCGGATCACATTTCTGTCACGAGTGTTGCAACTCGTGCATCTGTGGTCGACATTCTCCAAATTTATGCTCGGCGTGATCAGAACCCTTCTACCAAGCTTTCTCCAAAGTCTCCTACAAGCCAAAAGTCAAGCCAATTGCCTAAGTATCATTCACCTTCAACTCCCAAGGCACTATTTTCATCATCTGGCAGAAAGAAAACAAATGCAGCCAACTCAAGGATAGGCAGCTGGGGCAGAGATGAAGACATAAGGAGCATCACTAGTGTCAAATCAAAGCTCTCCCGGAGGCATACTATTGCAGGATCATCATTCAGGGATGATGAAAGCCTTGCCAGTTTACCTTCAGTTTCAAGTTACACGACGCCATCGAAGGCTGTGAAGAATCGGTCCCGGTTGGCAAGTTCGTCTAGAATAGAGAAGAAAGGAACAATGGAAAAAGGATCTGCAAGTGCAGGTTCTGCAAAAAAACAACTTTCCTTTTCAGCTTTTCCTGTTAAGCCAAGGAGGCAATCTAGTCCTCCAATTGTGAATACTAGCTAA | 6471 | 43.64 | MPPEPLPWDRKDLFKERKHEKSEAIGSAARWRDSYHGSREFNRWGSADFRRPTGHGKQGSWHQFSEESSHGYGPSRSFSDRVLEDESFRPSVPRGDGRYIRIGREIRGSFSHRDWRSHSRETNNGFGNPSRRPSSASQDASSDQRSVDDTVTYSSPQSVHGLENGPRADVEVSLGSTDWKPLKWSRSGSLSSRGSAYSSSTNSKNEKADLPLRVASPIESPSAETTACVTSSLPSEDAISRKKPRLGWGDGLAKYEKEKVEVPDGSLRKEVALLSSASAELTHSLGSNFAEKSPKTLPFSDCASPATPSSFACSSSSGLEDKTFSKGASVDGMICSSPGSSSQNLQKLLSSIEMMEFGSIANLGSSLVELFHSDDPSTVESCFGKSTLNKLLAYKGEISKKLETTESEIDSLENELKSLKSGNGGNVSHKKSCSVTHLVENVTYFKEQDGVSCVAPRPAPLVIVSSSDATVEKMPVCKGDMGVEDVDTKADEIDSPGTVTSKFNEPSRVVKTLASDLVVNGHCSEVTDVIVPDKMEGNFPVSRSFVDKHKTIGSDNECILAKSCTKESIYGDLMAQAGSRSSLCDQIFVCNKEYASRAAEVIFKKLPAEMCKISSKSTKIVSCSEIEKLVKEKFLMRRQFLKFKESALTLRFKALQQSWKEGLLHSVKKCRSRPQKKELSLRVSHSGHQKYRSSTRSRLVQQGACQNPTLNTEIAVRYSSKLLLNPQIKLYRNSLKMPAMILDKKEKMALRFISHNGLVEDPCAVEKERNMINPWTSAEREIFWEKLSLFGKDFKKISSFLDLKTTADCIQFYYKNHKSDSFKKNKNLELGKQVKSSAITYLVTSGKKWNPDMNATSLDILGVASIMAAQADYDIGNKQKCTRHLGMGRDVESKVSCSASTPSNKNNLDALQTEKETVAADVLAGICGSISSEALSSCITSAIDPSEDHRERKCYKVDSAVKLPSLSDVMQKTDNEEPCSDDSSEDVDSSNWTDEEKSIFMQAVSSYGKDFDMISRCIRSKSRDQCKVFFSKARKCLGLDLMHTSGDVGETPGSGNDASGSGTDTEDHCIVEICGAHGSDEFVSKSINGVSTSVNINHEESVSAVTVNMRTSSEFEESTVLQQSDEKCAEAVGNLMSEISKEEDLPSPDSHSAYNLTNAAASLSQPVHDHKIEGSSENTEGGSKCCNEPDILRSESVSTVDENSAAVSESRATAKLAFGGEEEGRNTNLHVQSILQCSVQDSTGFDSNLALEGSSLGLDPQILHPTVLKVEHVEKSCVESENSLAVGNSDPGVIGREQMLNQDMLSSIAVLQEVSDAHQKPMNRDDYAEHQNNFSLDSESKFPRSYPFNKQIFEDINRNINRTYFPVVQGLSKPDINCNSSYVSEGHYLQNCNSSKPHNPAELPFLPQNIDLGHDRQKKALCSGSASDSDVPRRKGDVKLFGQILSHAPSKQNSSSGSNEGGEEKGLHKSSSKSCDIGENVPLRSYGFWDGSRIQTGLSALPDSAILQAKYPAAFSGYSATSVKTEQQPLQALTNNGDRSLNGLVSAFPTKDGVVDYHSYRSRDGVKMRPFPVDIFSEMQRRNGFDAVSLSSLQQRGRVLVGMNVVGRGGILMGGSCTGVSDPVAAIKMHYAKAEQYVGQPGSTFTREDGSWRGGNGGDLGSRHQEKSCKCNDQRDENQPMAYSYEVVSTAEQKVPMRLSVSTSSAFLRSSSYICFLKPDKSKKKWFQKEESVDVISFLEQSPLDVPAQPPIEDDVKQTEPENEPSELAHLEAAESAVAEAQLAVVVEYPPSPISCRPEMSEETAASVIQTAFRGYTARRALRALKALMRLKTLVQGQSVKRQVASTLKCMQTLTHLQSEIRARRIRMSEENQALQRQLRNKREKDLEKLKFAMDDDWNDSTQSKAQIEAKLLNKHEAAIRRERALAYAYSHQQTWKNSSKTSTPTVMDPNNPHWGWSWLERWMAARPWESQSTTDQPDHISVTSVATRASVVDILQIYARRDQNPSTKLSPKSPTSQKSSQLPKYHSPSTPKALFSSSGRKKTNAANSRIGSWGRDEDIRSITSVKSKLSRRHTIAGSSFRDDESLASLPSVSSYTTPSKAVKNRSRLASSSRIEKKGTMEKGSASAGSAKKQLSFSAFPVKPRRQSSPPIVNTS | 2156 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 31983545 | 31996787 | - | CcPI632755_05g023470.1 | Cco05g2347 | 179975 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco05g2347 | 2156 | Gene3D | - | 751 | 823 | - | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 1446 | 1474 | - | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 79 | 120 | - | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 2090 | 2109 | - | - | |
| Cco05g2347 | 2156 | SUPERFAMILY | Homeodomain-like | 758 | 820 | IPR009057 | - | |
| Cco05g2347 | 2156 | Coils | Coil | 395 | 422 | - | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 966 | 991 | - | - | |
| Cco05g2347 | 2156 | Coils | Coil | 1865 | 1885 | - | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 1643 | 1675 | - | - | |
| Cco05g2347 | 2156 | Pfam | Myb-like DNA-binding domain | 991 | 1032 | IPR001005 | - | |
| Cco05g2347 | 2156 | Pfam | Myb-like DNA-binding domain | 774 | 816 | IPR001005 | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 58 | 75 | - | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 121 | 161 | - | - | |
| Cco05g2347 | 2156 | ProSiteProfiles | SANT domain profile. | 987 | 1038 | IPR017884 | - | |
| Cco05g2347 | 2156 | ProSiteProfiles | IQ motif profile. | 1802 | 1830 | - | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 1446 | 1461 | - | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 2003 | 2052 | - | - | |
| Cco05g2347 | 2156 | CDD | SANT | 991 | 1030 | IPR001005 | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 44 | 231 | - | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 2003 | 2051 | - | - | |
| Cco05g2347 | 2156 | ProSiteProfiles | SANT domain profile. | 770 | 821 | IPR017884 | - | |
| Cco05g2347 | 2156 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 1 | 1660 | - | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 8 | 31 | - | - | |
| Cco05g2347 | 2156 | SUPERFAMILY | Homeodomain-like | 986 | 1038 | IPR009057 | - | |
| Cco05g2347 | 2156 | SMART | sant | 988 | 1036 | IPR001005 | - | |
| Cco05g2347 | 2156 | SMART | sant | 771 | 819 | IPR001005 | - | |
| Cco05g2347 | 2156 | Gene3D | - | 936 | 1045 | - | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 2090 | 2156 | - | - | |
| Cco05g2347 | 2156 | MobiDBLite | consensus disorder prediction | 180 | 207 | - | - | |
| Cco05g2347 | 2156 | ProSiteProfiles | Myb-like domain profile. | 984 | 1034 | IPR001005 | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco05g2347 | - | - | - | - | 0.0 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco05g2347 | Cco-Chr5:31983545 | Cco09g2240 | Cco-Chr9:36699663 | 1.70E-109 | dispersed | |
| Cco09g2255 | Cco-Chr9:36837718 | Cco05g2347 | Cco-Chr5:31983545 | 1.70E-235 | transposed | |
| Cco10g2042 | Cco-Chr10:33797420 | Cco05g2347 | Cco-Chr5:31983545 | 5.40E-52 | wgd |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi13g485 | Blo04g00072 | Blo13g00920 | Bda14g00076 | . | Bpe04g01676 | Bpe15g01070 | Bma03g00329 | Bma08g01149 | . | Cmo04g01430 | Cma04g01356 | Cma18g00884 | Car04g01433 | Car18g00809 | . | Cpe13g00811 | Cpe09g00426 | . | . | . | . | . | . | . | Cla05g02130 | Cam05g2285 | . | Cco05g2347 | Clacu05g2280 | Cmu05g2144 | . | . | . | Cone11ag1067 | Cone18ag0511 | Lsi02g01717 | . | Chy10g01338 | Cme10g00058 | . | Blo04g00310 | Bda14g00340 | Bda15g00384 | Bpe04g01676 | Bpe15g01326 | Bma03g00082 | . | . | Cmo04g02708 | Cmo15g00455 | Cma04g02587 | Cma15g00447 | Car04g02498 | Car15g00414 | Cpe01g01225 | Cpe01g02248 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Lsi04g00056 | Csa05g01758 | . | . |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Cco09g2240 | . | 1 | 479 | IQD Protein Family | AT3G52290 | 52.9 | 4.8e-104 | 375.2 | |
| Cco05g2347 | . | 1768 | 1977 | IQD Protein Family | AT2G26410 | 51.2 | 2.0e-43 | 174.1 | |
| Cco03g1216 | . | 34 | 441 | IQD Protein Family | AT3G22190 | 57.2 | 1.0e-95 | 347.4 | |
| Cco05g2036 | . | 1 | 438 | IQD Protein Family | AT2G26180 | 61.6 | 2.7e-120 | 429.1 | |
| Cco04g2133 | . | 25 | 298 | IQD Protein Family | AT2G33990 | 52.9 | 1.2e-62 | 236.9 | |
| Cco07g1069 | . | 109 | 292 | IQD Protein Family | AT2G33990 | 52.9 | 1.5e-47 | 186.8 | |
| Cco04g2133 | . | 80 | 246 | IQD Protein Family | AT3G15050 | 61.7 | 2.5e-55 | 212.6 | |
| Cco07g1069 | . | 112 | 285 | IQD Protein Family | AT3G15050 | 61.0 | 3.0e-53 | 205.7 | |
| Cco01g0795 | . | 121 | 473 | IQD Protein Family | AT5G13460 | 50.7 | 3.3e-76 | 282.7 | |
| Cco06g0276 | . | 1 | 508 | IQD Protein Family | AT4G00820 | 51.5 | 9.7e-115 | 411.0 | |
| Cco03g1666 | . | 1 | 391 | IQD Protein Family | AT3G16490 | 50.2 | 2.0e-64 | 243.4 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0007579 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 0 | 36 |
Regulatory proteins
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 59364 | PF00249 | Myb_DNA-binding | 2.90E-06 | CL0123 | Cco | TF |