Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g2351 ATGGCTGATTGTGGAACAGAGCAGCGTACTCTGGAAGATACTTCAACTTGGGCTGTTGCGGTTGTTTGTTTTTTCTTGGTTGTTATTTCAATCTTCATTGAACATGTCATTCATCTCACTGGAAAGTGGCTGGAGAAAAGGCACAAGCCAGCTCTTGTTGAAGCTCTAGAAAAGGTTAAAGCAGAGCTTATGCTGTTGGGATTTATATCCCTACTTCTAACGGTAGGCCAAGATGCTGTCACTCAAATTTGTGTTTCGAAGGAGCTTGCGACAACTTGGCTTCCATGTGCAGCAAAAGCTAAAACAGGAGTAAAAGTTGCGAAGAAAAGTCGTCTTAAACTTCTTGAATTTTTAGATCCTGACTATGGTTCGAGGCGTATTTTAGCTTCAAAAGGAGACGATGCGTGCGCTAAGAGGGGTCAACTTGCTTTCGTGTCTGCATATGGAATCCACCAGCTCCATATTTTCATCTTTGTATTGGCTGTCTTCCATGTTCTATACTGCATCACCACTTTGGCTTTGGGCAGAACAAAGATGAGCAAATGGAAGGCCTGGGAGGATGAGACAAAAACAATTGAATACCAGTACTATAATGATCCAGCAAGATTTAGATTTGCCAGAGATACAACATTTGGACGCCGGCACTTGAGCTTTTGGAGTCGTACACCACTTTCCCTCTGGATTGTTTGTTTCTTCCGACAATTCTTTGGATCAGTAACCAAGGTTGATTACATGACACTGAGGCATGGATTCATCGTTGCACATCTAGCGCCCGGAAGTGAAGTAAAATTTGATTTCCACAAATACATCAGCAGATCTCTCGAAGACGACTTTAAAGTTGTTGTGGGGATTAGTCCAGCAATGTGGCTATTTGCTGTTCTCTTCATCCTAACCAATACAAATGGGTGGTATTCATATCTATGGCTGCCTTTCATCTCCTTAGTTATAATTTTGTTGGTGGGAACGAAGCTCCATGTTATCATAACTCAAATGGGATTGACAATTCAAGAAAGGGGCCACGTTGTGAAGGGTGTTCCCGTCGTTCAGCCCCGGGATGACCTGTTTTGGTTCGGACGTCCGCAACTTATTCTCTTTCTGATTCACTTTGTTCTCTTTATGAATGCATTTCAGCTTGCCTTCTTTGCTTGGACCACATACGCATTTAAGTGGAGAGCTTGCTTCCATCAACGAATTGAAGATATTGCCATCAGACTCTCAATGGGGGTTATCATACAAGTTCTATGCAGTTATGTGACACTCCCACTCTATGCTTTGGTGACTCAGATGGGCTCTAACATGAGACCAACCATTTTCAACGACCGAGTGGCGACGGCATTGAAGAACTGGCACCACTCTGCCAAGAAGAACATGAAGCACCAGCGCAACCCAGACAGTACCTCACCATTCTCAAGCAGGCCAACTACTCCAACTCACGGCATGTCTCCTATTCACCTTCTGCACAAACATCAGCATGGCAGCACATCTCCCAGGCTATCTGATGCCGAACCAGATCGTTGGGACATTGAAGAGTTGCCTCCTTCTTCACACCATAGTAGAGCCCATGATAATCAAGAACAAGAACATTCTGAGACAAATAGAGAACAGGAGATGACAGTTCAACGGCCAAGTTCTACAGAAACTAGTTCCATGACACGTCCTGCTCGCCCTCAACATGAAATCACTAGGAGTCCCTCAGACTTCTCATTTGCCAAATGA 1716 44.17 MADCGTEQRTLEDTSTWAVAVVCFFLVVISIFIEHVIHLTGKWLEKRHKPALVEALEKVKAELMLLGFISLLLTVGQDAVTQICVSKELATTWLPCAAKAKTGVKVAKKSRLKLLEFLDPDYGSRRILASKGDDACAKRGQLAFVSAYGIHQLHIFIFVLAVFHVLYCITTLALGRTKMSKWKAWEDETKTIEYQYYNDPARFRFARDTTFGRRHLSFWSRTPLSLWIVCFFRQFFGSVTKVDYMTLRHGFIVAHLAPGSEVKFDFHKYISRSLEDDFKVVVGISPAMWLFAVLFILTNTNGWYSYLWLPFISLVIILLVGTKLHVIITQMGLTIQERGHVVKGVPVVQPRDDLFWFGRPQLILFLIHFVLFMNAFQLAFFAWTTYAFKWRACFHQRIEDIAIRLSMGVIIQVLCSYVTLPLYALVTQMGSNMRPTIFNDRVATALKNWHHSAKKNMKHQRNPDSTSPFSSRPTTPTHGMSPIHLLHKHQHGSTSPRLSDAEPDRWDIEELPPSSHHSRAHDNQEQEHSETNREQEMTVQRPSSTETSSMTRPARPQHEITRSPSDFSFAK 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32027397 32031487 + CcPI632755_05g023510.1 Cco05g2351 179979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g2351 571 MobiDBLite consensus disorder prediction 462 478 - -
Cco05g2351 571 MobiDBLite consensus disorder prediction 451 571 - -
Cco05g2351 571 Pfam Mlo family 8 489 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco05g2351 571 PANTHER MLO-LIKE PROTEIN 1 4 535 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco05g2351 571 MobiDBLite consensus disorder prediction 536 571 - -
Cco05g2351 571 MobiDBLite consensus disorder prediction 493 535 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g2253 Cco-Chr2:35108370 Cco05g2351 Cco-Chr5:32027397 1.10E-191 dispersed
Cco03g0239 Cco-Chr3:2592180 Cco05g2351 Cco-Chr5:32027397 5.70E-99 dispersed
Cco04g2118 Cco-Chr4:35035853 Cco05g2351 Cco-Chr5:32027397 3.30E-110 dispersed
Cco05g2351 Cco-Chr5:32027397 Cco10g0012 Cco-Chr10:197771 8.20E-128 dispersed
Cco05g2351 Cco-Chr5:32027397 Cco03g0237 Cco-Chr3:2541930 1.30E-189 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g2351 K08472 - csv:101218929 1087.02