Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g2555 ATGAGGACAACAAGAACGCCTACCATTAACCTAGATCAAATTCCAAGTTTTGAAGAACATGGTAATGGCTTTGATCAACATGATGTGTTGGTTGAGGAGATTGAAGGCCTGATTAGAGTTTACGGAAATGGGTATGTGGAAAGACCCCAGATAGTTCCCTGTGTCTCTAATGCATTGCCGCCAGAGCTCGGTGTTACTTCTTGGGATGTAGTTGTGGATAAGGTGAACAACCTTTGGGCTCGTTTCTATGTTCCAACACAGTGCCAGGAGAAGCTGCCTCTGATTGTATATTTCCATGGAGGTGGGTTTTGTGTTGGCTCGGCTGCTTGGAGTTGCTACCATGAGTTCCTGGCGAAGCTTTCTGCAAAAGCCGACTGTATAATTATGTCTGTGAATTATCGTTTGGCTCCAGAAAACCCTCTTCCAGCTCCTTATGAAGATGGATTAAAGACCCTTCAATGGTTGAAACAAGTTGCTTTTGTAGGGGTCAAGCAGAATTGGTGGTCAAGATACTGCGACTTTACCAAAATCTACCTTAGTGGTGATAGTGCCGGCGGCAACATAGCCTTCAATGTAGCCGCCAGACTTGGTGGTAAGACGACTGCTTCTGGAGCTGTGGTCTTGAAACCATTAGTTATTAAAGGTAGCATTTTGATACAACCATTTTTCGGCGGAGAGTCAAGGACCAAGTCAGAGAAGTTTCTTGTCCAACCTCCTCGTTCGCCACTGACGCTGGCGGTTTCTGATACGTACTGGCGGTTGGCGTTGCCTTCCGGGACAAACCGTGATCACCCATGGTGCAATCCTTCGGCGAAAGGATTGTTTAAGGTGGAGGATTTGAGGGTTTTGCCTAGTTTGATATGTATATCAGAAATGGACATATTGAAAGATAGGAACTTGGAGTTTTGCTCTGCTTTACATAGGGCGGGTAAGCTGATCAATTATGTGGTTTATGAAGGAGTTGGGCATGCGTTTCAGGTTCTGAACAAGTCACAACTCGCACAAACTCGGACCCTTGAAATGATTGATCATATCAAGGATTTCTTGTGTGTATAG 1056 45.08 MRTTRTPTINLDQIPSFEEHGNGFDQHDVLVEEIEGLIRVYGNGYVERPQIVPCVSNALPPELGVTSWDVVVDKVNNLWARFYVPTQCQEKLPLIVYFHGGGFCVGSAAWSCYHEFLAKLSAKADCIIMSVNYRLAPENPLPAPYEDGLKTLQWLKQVAFVGVKQNWWSRYCDFTKIYLSGDSAGGNIAFNVAARLGGKTTASGAVVLKPLVIKGSILIQPFFGGESRTKSEKFLVQPPRSPLTLAVSDTYWRLALPSGTNRDHPWCNPSAKGLFKVEDLRVLPSLICISEMDILKDRNLEFCSALHRAGKLINYVVYEGVGHAFQVLNKSQLAQTRTLEMIDHIKDFLCV 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33843970 33845025 - CcPI632755_05g025550.1 Cco05g2555 180183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g2555 351 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 177 189 IPR033140 -
Cco05g2555 351 PANTHER ARYLACETAMIDE DEACETYLASE 36 335 IPR050466 -
Cco05g2555 351 Pfam alpha/beta hydrolase fold 95 326 IPR013094 GO:0016787(InterPro)
Cco05g2555 351 SUPERFAMILY alpha/beta-Hydrolases 29 349 IPR029058 -
Cco05g2555 351 Gene3D alpha/beta hydrolase 37 350 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1266 Cco-Chr4:27988194 Cco05g2555 Cco-Chr5:33843970 5.80E-51 dispersed
Cco05g2555 Cco-Chr5:33843970 Cco07g1700 Cco-Chr7:31009659 3.50E-105 dispersed
Cco05g2555 Cco-Chr5:33843970 Cco02g2556 Cco-Chr2:37895243 7.70E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g2555 - - - 0.0