Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g2629 ATGGGGAAAACCGGGGCCAAGTTGCCAAGTTTCTGTCTGAACCGGATCCGGCCTCATGTTCGAGTTCCTATTCAATCCAAACCGGACTCTGTTTCTGTAAAAACCGGTCCTAACAAGAAGGCTGATGATTCCGTTGATGACATTCAAGTTGGAGCTAAGCCAGTTTTGGGAATTGGAAGGAAGATCATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTTCATTGGGCTCTCTCTCACACTGTCCAAAATCAAGACAACATTCTTCTTCTTCATCTCACTAAGCCTTCAACAAAAGGAGAAGGACTGAGTAAGGAGACAGCACCAAGAGCTTACGAATTGGTTCATTCCATGAGAACTTTATGCCAATTGAAGAGACCTGAGGTGGAAACGGAAGTTGCGGTGGTGGAAGGAGGGAAGGAGAAAGGGGCAGTGATAGTGGAAGAAGCGAGAAAGCGAGGGGTGTCGTTGCTGGTTTTGGGGCAGAAGAAACGGTCGACGACATGGCGGCTTCTGATGGTGTGGGCAGGCCACCGGTGGGGCGGCGGAGGTGGCGGCGGTGGTGTGGTGGAGTATTGTATACAAAATGCGAGCTGTATGGCGATTGCGGTGAGAAGGAAGAGCAAGAAATTGGGTGGTTATTTGATCACTACAAAGCGTCAAAAGGATTTCTGGCTTTTGGCTTAA 693 48.92 MGKTGAKLPSFCLNRIRPHVRVPIQSKPDSVSVKTGPNKKADDSVDDIQVGAKPVLGIGRKIMIVVDSTIEAEGALHWALSHTVQNQDNILLLHLTKPSTKGEGLSKETAPRAYELVHSMRTLCQLKRPEVETEVAVVEGGKEKGAVIVEEARKRGVSLLVLGQKKRSTTWRLLMVWAGHRWGGGGGGGGVVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34437282 34438167 - CcPI632755_05g026290.1 Cco05g2629 180257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g2629 230 Pfam Universal stress protein family 60 207 IPR006016 -
Cco05g2629 230 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 230 - -
Cco05g2629 230 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 60 210 - -
Cco05g2629 230 Gene3D HUPs 59 214 IPR014729 -
Cco05g2629 230 CDD USP_Like 61 206 - -
Cco05g2629 230 MobiDBLite consensus disorder prediction 25 45 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g2629 Cco-Chr5:34437282 Cco11g1622 Cco-Chr11:29042893 1.30E-20 dispersed
Cco01g1748 Cco-Chr1:30234069 Cco05g2629 Cco-Chr5:34437282 7.20E-43 wgd
Cco05g2629 Cco-Chr5:34437282 Cco06g1743 Cco-Chr6:27914110 2.70E-29 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g2629 - - - 0.0