Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g2632 ATGGACATGGCAGATGAAGTTAAATCCCACTACTTAAGTACCCGTGTAGAGTTAAAATATTCTGCCATTGTTGCACTGTTGCAAGACAAAGCCACCAATTGTGGGAGCTGTCGATTCTTCAACTGCATGCGATACGATTTTTGTAATGCCCCAAAATTTAGTTCAATGCTCGCTAGCTATAGAGAGGTGAGGATCCATGAAAGTTTGGAGGAGCTAAGTACTGATTTAGCTGACTATATTGCTGAATTATCAGAGGCATCTGTGAAAGAACGTGGGGTATTTTCTATTGCGTTATCTGGTGGTTCTCTGATTAGCTTAATGGGAAAGCTCTGTGAAGCTCCTTACAACAAGACTGTCGACTGGGCTAAGTGGTATATATTTTGGGCTGATGAACGTGTTGTTGCAAAAAGCCATGCGGACAGCAATTATAAGCTTGCAAAGGATAACCTTCTTTCCAAGGTGCCAATTGTTCCCAGCCATGTACACTCGATCAATGATTCAGTGTCAGCTGAGGAAGCTGCCGATGAGTACAAGTTCGTCCTTCGACAGTTAGTTAAATCCCGCATCGTAAGTGTGTCTGATGTGAGTGACAGTCCCAAGTTTGACCTCATACTACTTGGAATGGGTTCTGATGGCCATGTTGCCTCATTATTCCCCAATCACTCTGTGGTCGAGGAGAAAGATGAATGGGTTGCCTTCATAACCGATTCTCCGAAACCTCCGCCAGAGAGAATCACCTTCACATTGCCTGTGATCAACTCTGCATCAAATGTGGCGATTGTTGTGACAGGTGAGAACAAAGCAGAGGCTGTACATTTGGCCATCGATGATGTAGGAGCAGACTGCCCACTCCTACCTGCGAGGCTTGAGGCATTTGCTTGGCCTTGGAAATGGAAACCCAAATCCAGTTTCCGATTGCATTTGCCTCGTGAGAGAAGATTCCCTTCAATGTTTCATCATTTCATTAATATGAAAATTGCATCGCATTCAACGAGTTGTTGGCCTCTGCTCCATCATTTCATCGCGCAGAAGATGTCGACATTCGAGTTGTCGATGACGTTCACTTACGATGTCTGA 1077 44.57 MDMADEVKSHYLSTRVELKYSAIVALLQDKATNCGSCRFFNCMRYDFCNAPKFSSMLASYREVRIHESLEELSTDLADYIAELSEASVKERGVFSIALSGGSLISLMGKLCEAPYNKTVDWAKWYIFWADERVVAKSHADSNYKLAKDNLLSKVPIVPSHVHSINDSVSAEEAADEYKFVLRQLVKSRIVSVSDVSDSPKFDLILLGMGSDGHVASLFPNHSVVEEKDEWVAFITDSPKPPPERITFTLPVINSASNVAIVVTGENKAEAVHLAIDDVGADCPLLPARLEAFAWPWKWKPKSSFRLHLPRERRFPSMFHHFINMKIASHSTSCWPLLHHFIAQKMSTFELSMTFTYDV 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34466605 34471957 - CcPI632755_05g026320.1 Cco05g2632 180260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g2632 358 PANTHER 6-PHOSPHOGLUCONOLACTONASE 51 290 IPR039104 -
Cco05g2632 358 CDD 6PGL 70 289 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
Cco05g2632 358 Gene3D - 58 292 - -
Cco05g2632 358 NCBIfam 6-phosphogluconolactonase 65 287 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
Cco05g2632 358 Coils Coil 69 89 - -
Cco05g2632 358 FunFam Probable 6-phosphogluconolactonase 58 298 - -
Cco05g2632 358 SUPERFAMILY NagB/RpiA/CoA transferase-like 62 288 IPR037171 -
Cco05g2632 358 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 69 283 IPR006148 GO:0005975(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0021 Cco-Chr1:128660 Cco05g2632 Cco-Chr5:34466605 1.80E-41 dispersed
Cco01g0022 Cco-Chr1:131617 Cco05g2632 Cco-Chr5:34466605 1.40E-69 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g2632 K01057 - csv:101210739 419.083