Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco05g2749 | ATGAGTGGATGGGATAGGGTTAGACCATCGAGTTCGAGATTTGGGCGGGGTAATTCTGCAATGCACGAGAGGACCACCTCTACTACAACGGTTCGACTCGGACGAGTCCAGCCGCAGGCCCCTGGACATCGTACCATCTTCTGCAATGATCGCGACGCTAATCTTCTTGTCAAATTCAAGGGGAATTCAGTTTCGACGACTAAGTACAACTTCTTCACTTTCTTTCCGAAAGGGTTGTTTGAACAGTTCAGGCGTGTGGCTAACCTATACTTTCTTACCATCTCAATCTTATCCACCACACCCATCAGTCCTGTGCATCCAATTACAAATGTGGTCCCTTTAAGTCTGGTTCTACTCGTCTCTCTCATTAAAGAAGCATTTGAGGACTGGAAACGATTCCAGAATGATATGGCAATTAATAATAATCTTGTAGATGTGCTGCAAGATCAAAAGTGGGAGAGCGTTCCTTGGAAAAGGTTGCAAGTTGGAGACATTGTTAGGGTTCGGCAAGATGGATTTTTTCCTGCGGATCTTCTTTTCCTTGCTAGTACAAATCCAGATGGTGTCTGCTACATTGAGACTGCTAACCTGGACGGGGAGACAAATTTGAAGATTAGGAAGGCCCTGGAAAAGACCTGGGATTACCTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAGTACAATGCGAGCAACCAAACAATTCACTCTACACTTTCACAGGCAATGTTATTATTCAGAAGCAAACATTACCTCTCAGCCCAAACCAACTTTTATTGCGAGGATGCAGTCTCAGGAACACTGAGTATATTGTTGGGGCTGTTATTTTTACTGGCCATGAAACAAAGGTTATGATGAATGCTATGAATGTTCCCTCCAAAAGAAGTACTCTGGAAAAGAAACTTGACAAACTTATACTTACACTATTTGCTACTCTCTTTATGATGTGTTTGATTGGAGCCATCGGCAGTGGTGTGTTTGTAAACCAAAAGTACTACTACTTAGCTCTTGATAAGGGAGGTGAAAACCAATTCAACCCTCGCAACCGGTTCCTGGTTGTCATTCTGACCATGTTTACCCTGATTACTCTGTACTCGACAATCATTCCTATTTCCCTTTATGTTTCCATTGAGATGATCAAATTTATTCAATCGACACAATATATCAATAAAGATCTAAATATGTTCCATGCTGATAGCAATACCCCTGCATTGGCCAGAACTTCCAATTTGAACGAAGAACTTGGACAGGTAGAGTACATCTTTTCAGATAAAACTGGTACTCTTACCAGGAATCTAATGGAGTTCTTTAAGTGTTCAATTGGTGGAGAGGTTTATGGCACTGGTATCACAGAAATAGAGAGGGGAATTGCTGAGCAGAATGGCTTGAAAGTGGAAGAGGCATCAGCCAATGCTGTTCAAGAAAAGGGATTTAACTTCGTTGATGCAAGGCTAATGAGAGGAGCATGGAGAAATGAGCCCAACGCTGATCTTTGTAAGGAATTTTTCAGATGCCTTGCTATTTGTCATACTGTACTTCCTGAGGGTGACGAATCCCCAGAAAAGATCACATATCAAGCAGCATCACCTGATGAGGCTGCCTTGGTAACTGCTGCTAAAAACTTTGGCTTCTTCTTTTACAGGCGTACACCTACAACAATATATGTTCGCGAATCTCATGTTGAGAAGATGGGTAAAATCCAAGATGTTTCTTATGAAATTCTCAATGTACTTGAGTTCAATAGTGTAAGGAAGCGTCAGTCTGTGGTGTGTCGTTATTCTGATGGCAGGCTTGTTCTGTACTGCAAGGGTGCTGATACCGTAGTATATGAGAGATTGGCTGGTGGAAATGATGATCTGAAGAATGTAACTAGGGAACACTTGGAGAAATTTGGATCTTCCGGTCTGAGAACCCTATGCCTTGCTTACAGAGATTTGCATCCTGACGTGTATGAAAGCTGGAATGAGAAATTCATTCAAGCTAAGTCTTCATTAAGAGATCGTGAAAAGAAATTGGATGAGGTTGCAGAACTTATAGAGAAAGAACTTATTTTGATTGGCTGTACTGCTATAGAAGATAAGCTTCAAGAAGGAGTACCAAACTGTATACAGACACTTTCTAGAGCTGGTATCAAGATTTGGGTGCTAACAGGAGACAAGATGGAAACTGCTATTAATATAGCTTATGCTTGCAATTTAATAAACAATGAAATGAAACAATTTATTATCAGTTCAGAAACGGATGCAATCAGAGAAGTTGAAAACAGGGGTGACCAAGTAGAACTTGCACGTTTTATTAGAGAAGAAGTAAAAAAGGAACTGAAGAGATGTCTTGAGGAAGCGCAGCAGTGTTTACATTCTGTCTCTCCACCAAAATTAGCACTCGTTATAGATGGAAAATGTTTGATGTATGCATTAGATCCAAGTCTGCGAGTTACTTTACTAAACTTGAGCTTGAATTGTAGTTCGGTTGTTTGCTGCCGGGTTTCTCCTTTGCAGAAAGCGCAGGTGACAAGTCTGGTGAAGAAAGGTGCACAGAAAATAACACTTAGTATTGGCGATGGTGCTAATGATGTTAGCATGATTCAAGCAGCTCATGTGGGCATTGGAATAAGTGGGCAGGAAGGAATGCAAGCAGTGATGGCTAGTGATTTTGCTATTGCTCAGTTTCGCTTTCTCACAGATTTGCTTCTTGTGCATGGGCGATGGTCATATCTTAGAATATGCAAGGTTGTCACGTACTTCTTTTACAAGAATCTTACATTCACTTTAACTCAGTTTTGGTTTACCTTCCAAACTGGATTTTCTGGTCAAAGATTCTACGATGATTGGTTCCAGTCGTTGTATAATGTCATATTCACCGCCCTACCTGTAATAATAGTTGGACTATTTGACAAGGATGTCAGTGCTTCCCTTTCCAAAAAGTACCCTGAGCTCTACAGAGAGGGAATAAAAAATGTGTTCTTCAAGTGGAGAGTTGTGACAACTTGGGCTTTCTTTTCCATCTACCAATCTTTAGTCTTTTATTATTTTGTAACCGCTTCTAGTTCCAGCAGTCAATCGTCATCTGGCAAGGTGTTTGGTCTGTGGGATATCAGCACGATGACTTTCACTTGCATTGTCGTGACTGTGAATTTGCGGCTGCTTATGATCTGCAATTCAATTACCCGGTGGCATTATATTACAGTTGGGGGAAGCATTTTAGCATGGTTCCTATTTATTTTCTTATATTCCGGTATTATGACACCCCATGATAGGCAGGAAAATGTATATTTCGTCATATATGTCTTAATGAGTACATTATACTTTTACGTAGCTGTTATCCTTGTCCCCGTTGTTGCACTTCTTTGTGATTTCGCTTACCAAGGCATTCAGAGATGGTTTTTCCCCTACGATTATCAGATAGTACAAGAAATACATAGACATGAACCTGAAGGTAGAGGTACGGCAGGATTGCTGGAGATTCAGAACCATCTTACACCGGAAGAGGCAAGAAGCTACGCCATGGCTCAACTCCCTCGAGAATTATCAAAGCACACTGGCTTTGCTTTTGACTCACCTGGCTACGAGTCATTTTTTGCTGCACAGCTTGGTATTTATGCCCCACAGAAAGCATGGGATGTTGCTAGGAGAGCCAGTGTGAAGTCAAGACCAAAGATTAAGGAAAAGAAGTATTTTCCCAACACAACATCCATCAAGAGAAAGCTCAACAGAAGTCAAATCTCCTATGCTCTACTGAATGCAAGCTGTTTTAGATTCTCTTGGAGGCTAATTGATTCAGCAAGATGCTTTCCAGCCAGTAGCGTCAAGTTTCACTGTGTAATTATGGATTTGAGAAAGAAGTTGGGAAGACAGCAAAGCAGTGAACATAATCATATCAAATTAGTGGGAACATATTACAAAGTTGTCCTGTACGAATCCATGAGAATGAGATCTGTAACAGTCTTGCTTGGAGCTGTGGTTGTGGGGCTGTTTGTATGGCTTTTAATCGTTGGGTCGCCACCGCGGGGAAGAACAACAAGCTGGCCGGAAGCCAAGTCTGAGGTTGAGGGAAGCCGTGTCATGAAGCAAGCTAAGGAATTGACCAACATCAACCATCCAAAGTTGGATCCTAACTTTATGAGCAAAGTTAGAGTTCCTAAAGGACCGGACCCCATTCATAACAGGAGAATTGGGGTTAAAGGAGGGCCTCCCAGAGGAGCTTAG | 4206 | 41.61 | MSGWDRVRPSSSRFGRGNSAMHERTTSTTTVRLGRVQPQAPGHRTIFCNDRDANLLVKFKGNSVSTTKYNFFTFFPKGLFEQFRRVANLYFLTISILSTTPISPVHPITNVVPLSLVLLVSLIKEAFEDWKRFQNDMAINNNLVDVLQDQKWESVPWKRLQVGDIVRVRQDGFFPADLLFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNVIIQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLEKKLDKLILTLFATLFMMCLIGAIGSGVFVNQKYYYLALDKGGENQFNPRNRFLVVILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIERGIAEQNGLKVEEASANAVQEKGFNFVDARLMRGAWRNEPNADLCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLEFNSVRKRQSVVCRYSDGRLVLYCKGADTVVYERLAGGNDDLKNVTREHLEKFGSSGLRTLCLAYRDLHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIEKELILIGCTAIEDKLQEGVPNCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIISSETDAIREVENRGDQVELARFIREEVKKELKRCLEEAQQCLHSVSPPKLALVIDGKCLMYALDPSLRVTLLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQAAHVGIGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYREGIKNVFFKWRVVTTWAFFSIYQSLVFYYFVTASSSSSQSSSGKVFGLWDISTMTFTCIVVTVNLRLLMICNSITRWHYITVGGSILAWFLFIFLYSGIMTPHDRQENVYFVIYVLMSTLYFYVAVILVPVVALLCDFAYQGIQRWFFPYDYQIVQEIHRHEPEGRGTAGLLEIQNHLTPEEARSYAMAQLPRELSKHTGFAFDSPGYESFFAAQLGIYAPQKAWDVARRASVKSRPKIKEKKYFPNTTSIKRKLNRSQISYALLNASCFRFSWRLIDSARCFPASSVKFHCVIMDLRKKLGRQQSSEHNHIKLVGTYYKVVLYESMRMRSVTVLLGAVVVGLFVWLLIVGSPPRGRTTSWPEAKSEVEGSRVMKQAKELTNINHPKLDPNFMSKVRVPKGPDPIHNRRIGVKGGPPRGA | 1401 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 35341328 | 35363021 | + | CcPI632755_05g027490.1 | Cco05g2749 | 180377 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco05g2749 | 1401 | Gene3D | - | 124 | 289 | - | - | |
Cco05g2749 | 1401 | FunFam | Phospholipid-transporting ATPase | 685 | 892 | - | - | |
Cco05g2749 | 1401 | NCBIfam | HAD-IC family P-type ATPase | 825 | 931 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cco05g2749 | 1401 | SUPERFAMILY | Calcium ATPase, transduction domain A | 141 | 285 | IPR008250 | - | |
Cco05g2749 | 1401 | Gene3D | - | 532 | 684 | IPR023299 | GO:0000166(InterPro) | |
Cco05g2749 | 1401 | MobiDBLite | consensus disorder prediction | 12 | 29 | - | - | |
Cco05g2749 | 1401 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Cco05g2749 | 1401 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 30 | 1143 | - | GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0048194(PANTHER)|GO:0140326(PANTHER) | |
Cco05g2749 | 1401 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 485 | 690 | IPR023299 | GO:0000166(InterPro) | |
Cco05g2749 | 1401 | PRINTS | P-type cation-transporting ATPase superfamily signature | 422 | 436 | - | - | |
Cco05g2749 | 1401 | PRINTS | P-type cation-transporting ATPase superfamily signature | 852 | 871 | - | - | |
Cco05g2749 | 1401 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 424 | 430 | IPR018303 | - | |
Cco05g2749 | 1401 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 880 | 1130 | IPR032630 | - | |
Cco05g2749 | 1401 | SFLD | Haloacid Dehalogenase | 404 | 903 | - | - | |
Cco05g2749 | 1401 | MobiDBLite | consensus disorder prediction | 1365 | 1401 | - | - | |
Cco05g2749 | 1401 | Pfam | E1-E2 ATPase | 143 | 322 | - | - | |
Cco05g2749 | 1401 | SFLD | p-type atpase | 404 | 903 | IPR044492 | - | |
Cco05g2749 | 1401 | NCBIfam | phospholipid-translocating P-type ATPase | 59 | 1138 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
Cco05g2749 | 1401 | Pfam | Cation transport ATPase (P-type) | 516 | 612 | - | - | |
Cco05g2749 | 1401 | CDD | P-type_ATPase_APLT_Dnf-like | 61 | 1012 | - | - | |
Cco05g2749 | 1401 | SUPERFAMILY | HAD-like | 410 | 895 | IPR036412 | - | |
Cco05g2749 | 1401 | Gene3D | - | 685 | 892 | IPR023214 | - | |
Cco05g2749 | 1401 | FunFam | Phospholipid-transporting ATPase | 120 | 289 | - | - | |
Cco05g2749 | 1401 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 54 | 1130 | IPR023298 | - | |
Cco05g2749 | 1401 | Pfam | Phospholipid-translocating ATPase N-terminal | 46 | 110 | IPR032631 | - | |
Cco05g2749 | 1401 | FunFam | Phospholipid-transporting ATPase | 529 | 684 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco05g2589 | Cco-Chr5:34145858 | Cco05g2749 | Cco-Chr5:35341328 | 2.30E-277 | dispersed | |
Cco05g2749 | Cco-Chr5:35341328 | Cco06g0899 | Cco-Chr6:11443306 | 5.10E-272 | dispersed | |
Cco04g0813 | Cco-Chr4:23446266 | Cco05g2749 | Cco-Chr5:35341328 | 1.80E-194 | transposed | |
Cco08g0989 | Cco-Chr8:21745021 | Cco05g2749 | Cco-Chr5:35341328 | 1.40E-185 | transposed | |
Cco05g2749 | Cco-Chr5:35341328 | Cco08g1060 | Cco-Chr8:22397884 | 1.00E-06 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco05g2749 | K14802 | - | csv:101207069 | 2357.79 |