Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g2779 ATGGAAGTTAAGGGAGAAAGAATATTGGGAATAATGGTTCCATTTTTGGCGATGGTGAGCTTAGAAGGTTGCACTATTGCATTAACAATATTGGCTAAAACAGCCATTACTTATGGAATCTCCACTTTTGTTTTTGTTGTGTATACAAACGCCGTTGCTTCCATCATTCTTCTTCCTTATTCCTTCATCTTTCATTACAACCACAGAATGGAATATCAACAATCTTTGTTTTCATTCCCTCTTCTCCTCCGAGTCTTCCTCTTGGGTTTCACAGGGATATGTATATCTCAGAACTTAGCATTTTTAGGCCTAAGTTACAGCTCTCCAATTGTTGTATGCGCAATGGGTCTTATGCTTCCAGCCATTTCCTTCATACTATCAATCCTTCTCGGGAGGACAAAAATTGAGTGGAAAAACCCCAACTTTATTACAAAACTAGTTGGGACAGTTATATCAGTTATAGGAGCTACATGTGAAGAGCTTTACCTAGGCCCAGTTGTACGGCAACATCCATCTTTTTCTACTACTACACATTTACAGTTCAAACAGAAGCTTTTGGTGTTTACTTCAACCACAGATCGTTGGATTTTGGGTGGCCTTTTATTAGTAGCTGCTACTTTATGTGTCTCAATATGGAACATTATTCAGTTGGGAGTTGTAAAACAGTACTCGCAAGTGATGAAAGTTGCCTCTTTTTATAGTATAGTGGGCACGTTACTCTCAACAATTGTGGGTTACTTTGTTGTCAATGATCCAAGTGCTTGGACAATCAACTCTAGCTTCGACCTCATTCTCATTATTGCAACGGGAACTTTTAGCGGTTTGATTCGAAACCGAGTGCAAATATGGTGCATGCAAAAGAAAGGGCCATATTACGTGCCCATGTTCAAGCCTTTTGGCATTCTTTTTGCCACCTTCTTTGGCGTCACTTTCTTTGGCGACACCTTTCATTATGGAAGTGTGATGGCAGCATTTATAGCTGGAATGGGGTATTTGACAGTAATGTGGGGGCAAATTAACGAAGATCGTGGAGTACGAGAAGACAAAGATGGTGAAAAGAATAGTGATGATTTGTCTTCAGCTAAAGTTCCACTTCTTGATGAAGAATCACAAGTGTAA 1119 39.59 MEVKGERILGIMVPFLAMVSLEGCTIALTILAKTAITYGISTFVFVVYTNAVASIILLPYSFIFHYNHRMEYQQSLFSFPLLLRVFLLGFTGICISQNLAFLGLSYSSPIVVCAMGLMLPAISFILSILLGRTKIEWKNPNFITKLVGTVISVIGATCEELYLGPVVRQHPSFSTTTHLQFKQKLLVFTSTTDRWILGGLLLVAATLCVSIWNIIQLGVVKQYSQVMKVASFYSIVGTLLSTIVGYFVVNDPSAWTINSSFDLILIIATGTFSGLIRNRVQIWCMQKKGPYYVPMFKPFGILFATFFGVTFFGDTFHYGSVMAAFIAGMGYLTVMWGQINEDRGVREDKDGEKNSDDLSSAKVPLLDEESQV 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35582102 35584691 - CcPI632755_05g027790.1 Cco05g2779 180407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g2779 372 MobiDBLite consensus disorder prediction 345 372 - -
Cco05g2779 372 PANTHER WAT1-RELATED PROTEIN 16 352 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cco05g2779 372 Pfam EamA-like transporter family 26 156 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g2779 Cco-Chr5:35582102 Cco09g2088 Cco-Chr9:35281341 2.00E-42 dispersed
Cco05g2779 Cco-Chr5:35582102 Cco09g2087 Cco-Chr9:35264875 3.30E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g2779 - - - 0.0