Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g2788 ATGGATCTGGAAAGTGGAGTTGTTAGTGAAAAGAATGCGAAGAAGGATTCATGGAAGACGGTTTTGATGATGGCTTATCAGAGTCTTGGGGTTGTTTATGGGGAGTTGGGCACTTCGCCTTTATATGTCTATAAGAACACTTTTGCAGAAGAAGATATCAATCACACCAAGAGCAACGATGAGATTTATGGGGTTTTGTCCTTTGTTTTCTGGACTCTGACCATTGTTCCTTTGCTCAAGTACATATTTATCGTTCTTAAAGCTGATGATAATGGGGAGGGAGGGACATTTGCTCTGTATTCGTTACTGTGTCGACATGCCCGAGTTAGCTCATTGCCCAATACCCAGTTGGCTGATTCTGAACTCACCGAGTACAAGATGAATGTCCTTGGTCCACCATCTCAACAAAGTTTTGGATTCAAACTCAAATCAGCACTAGAAAAACGTCGTGTTCTGCAAAAATTCTTGCTCGTTCTTGCTTTAATTGGGACTTGTATGGTGATAGGGGATGGCATCTTAACACCGGCTATTTCTGTTCTTTCGGCGGTTTCTGGCCTCGAACATACCATGGCGAAAGAGCATCACCAATATACAGTAATCCCAATTGCATGCGTCGTACTGATATGCTTGTTTGCGCTTCAACACTACGGCACTCACAGGATCGGCTTCTTGTTTGCTCCCATAGTGATAGTTTGGCTAGTGTGTATTAGTGCCATTGGCCTGTACAATATTATTCACTGGAATCCAGGTGTTTATAGAGCAATTTCTCCTCGTTACATGTTCCAGTTTCTTAAGAAAACACAAAAAGGAGGTTGGATGTCACTTGGTGGAATAATGTTGTGCATTACTGGTTCAGAGGCGATGTTTGCTGACCTTGGGCATTTTTCTCAGTTGTCAATTAAGATTGCTTTCACTTTTATGGTTTATCCGTCTCTCCTCCTAGCATACATGGGGCAAGCTGCCTATCTGTCCCAACATCATCCTCCAAATGATCATTCAATTGGGTTTTATGTATCTGTTCCTGATAAATTGAAGTGGCCTGTCCTTATAATTGCTGTGCTTGCTGCAGTAGTAGGAAGCCAGGCTATAATCACCGGAACTTTCTCGATTATAAAGCAGTGCTCTGCTTTGGGTTGCTTTCCTCGAGTTAAAATTATTCATACGTCCTCAAAAGTTCACGGTCAGATCTATATCCCAGAGGTCAATTGGATTTTGATGCTGTTGTGCTTGGCTGTTACCTTAGGTTTCAGAGACACAAAGCGCCTGGGCCATGCCTCAGGTTTGGCAGTGATAACTGTGATGCTTGTTACTACATGCTTGATGTCGCTTGTTATCGTCCTGTGCTGGCACCGAAGTGTATTTCTTGCAATAGGCTTCATCTTCTTTTTTGGCACCATTGAATCTCTCTACTTCTCAGCTTCTCTTATAAAATTTCTTGAAGGAGCTTGGGTTCCCATCGCAATTTCTCTTGTGTTCCTGATCGTTATGTATGTCTGGCACTATGGTACTCTGAAGAAGTTTGAATTCGACATCCAAAACAAGGTTTCTATTAACTGGCTACTTAGTTTTGGTCGCAACTTAGGCATTGTAAGAGTCCGTGGGATTGGCGTCATACAAACGGAGCTTGTTTCGGGTATCCCGGGTATCTTCACCCACTTTGTCACCAATATTCCCGCCTTCCATCAAGTTCTTGTTTTCCTTTGCATCAAATATGTCCCAGTGCCACATGTTAGACCAGAGGAAAGGTTTCTAATTGGTCGTATTGATACAAGTGAATACAGACTCTACCGGTGCATTGTGCGATATGGGTATCGAGATGTTCATAAAGACGATGTAGAGTTCGAGAATGATCTTATATGCAGCATAGCAGAGTTTATAAGGTCAGGGACTGCAGTGTCCGGTGATTCTAAACCGGACTTTGATAAAGATAGTGAAAAGATGTCAGTCGTCGGGACATCTTCTACCCATGAAGATAGGATGCAGATGGCTGAGACCGATAATGAAGAAGACTCTGAAGAACTGTACCAAGCTTCAGATACAAGGGAAATAAGGTCACCAGCTCCAGTTCAATTGAGAAAAAGAGTACGCTTCATTGTACCCAAGAGCCCGGAAATCAACACTGATGCAATGGAAGAATTACAAGAGCTAAGGGAAGCAAGAGAAGGAGGAGTAGCTTACATATTAGGACGGTCGCACATGAAAGCAAAACAAGGATCGAGCATGTTGAAAAGGGTGTCGATCGACTTCATTTACGAGTTCTTAAGGAAGAACAGCAGAGAAGCCGACTTCCCAGTAGGTTTATCACATTCATCATCAACCCTTGAGGTGGGTATGATGTATCTTGTTTAA 2349 42.74 MDLESGVVSEKNAKKDSWKTVLMMAYQSLGVVYGELGTSPLYVYKNTFAEEDINHTKSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVSSLPNTQLADSELTEYKMNVLGPPSQQSFGFKLKSALEKRRVLQKFLLVLALIGTCMVIGDGILTPAISVLSAVSGLEHTMAKEHHQYTVIPIACVVLICLFALQHYGTHRIGFLFAPIVIVWLVCISAIGLYNIIHWNPGVYRAISPRYMFQFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFTFMVYPSLLLAYMGQAAYLSQHHPPNDHSIGFYVSVPDKLKWPVLIIAVLAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKVHGQIYIPEVNWILMLLCLAVTLGFRDTKRLGHASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGTIESLYFSASLIKFLEGAWVPIAISLVFLIVMYVWHYGTLKKFEFDIQNKVSINWLLSFGRNLGIVRVRGIGVIQTELVSGIPGIFTHFVTNIPAFHQVLVFLCIKYVPVPHVRPEERFLIGRIDTSEYRLYRCIVRYGYRDVHKDDVEFENDLICSIAEFIRSGTAVSGDSKPDFDKDSEKMSVVGTSSTHEDRMQMAETDNEEDSEELYQASDTREIRSPAPVQLRKRVRFIVPKSPEINTDAMEELQELREAREGGVAYILGRSHMKAKQGSSMLKRVSIDFIYEFLRKNSREADFPVGLSHSSSTLEVGMMYLV 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35655765 35660748 - CcPI632755_05g027880.1 Cco05g2788 180416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco05g2788 782 Pfam K+ potassium transporter integral membrane domain 25 521 IPR053951 -
Cco05g2788 782 NCBIfam potassium uptake protein 24 780 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cco05g2788 782 Pfam K+ potassium transporter C-terminal domain 534 778 IPR053952 -
Cco05g2788 782 MobiDBLite consensus disorder prediction 631 677 - -
Cco05g2788 782 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 781 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g2788 Cco-Chr5:35655765 Cco10g1428 Cco-Chr10:27365148 0.00E+00 dispersed
Cco05g2788 Cco-Chr5:35655765 Cco09g2095 Cco-Chr9:35333752 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g2788 K03549 - csv:101212925 1493.02