Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco05g2863 | ATGCATTATTTCATTTGGGTTCCCCTTCTTTTTCTGTTAATTCCTCTATTTCTTCTCATAACCAAAAAGCTTCTTCACAACAACGAGAAGAAGGTGGTTAATGTTCCTCCTCCAACCCCTCCAAAGCTTCCTTTTTTGGGTCATTTACACCTCCTTGGCTCTCACCCACATCGCTCTTTATGGAACCTTTCAAAAAAACACGGCCCCATCATGCTCCTCAAACTCGGCTCTGTTCCTACCGTCATCATATCTTCAGCAGCCGTCGCAAGAGAGCTATTCAAACACCACGATCTTGCTTCTTGCAGTCGCCCTCGCTTAACAGGCAGTGGAAGATTTTCATACAACTTTCAAGACCTAAATTTATCCCCATATGGTGAGCGTTGGAGAGAGCTTCGAAAGATTTTTATACTTGAACTCTTCAGCACTAAGCGAGTACAATCATTTCAACATATTAGAGAAGAGGAAGTGGGTAAGCTATTAAAGATCATATCTAATTCTGCATCTCTTGGAACTCCAATTGATTTGAGTCAAACCATATATACTCTTACTGCAAATATAACCTTCCGAATTGCTTTTGGTAAAAGCTTTAGTGGGGGAGAATTAGATAATGAGAATTTTCAACACATCATTCGTAGAGCAATGGTTGCATTAGGAAGCTTCTCGGCGACTGATTTCTTTCCTGGTGTGGGTTGGATTATTGATCGGCTGAGTGGTGTTCATGGGATATTGGAGAAGAGCTTTGCTGAAGTGGATGCCATTTTTCAACAGGTAGTTGATGATCGCATCAAATTCATGGAAATTTCTCGAAATGAAGAAAATATTGTTGATGTTTTGTTGAGAATGGAGAGAGACAGCTCGGAATTTGATACAGTGAAATTTACCCAAGATCGTGTTAAGGCACTTATCATGGATATATTTCTAGCTGGAGTGGAAACAGGAGAAAACACCATAGTTTGGGCAATGACAGAAATTGTTAGAAACCCAAGAGTGATGAAAAGGCTACAAGATGAGATCAGAAGCTACATCAAAGAAGATCGAGTGAAAGAAAGAGACCTTGAAAAGCTTCAATATTTAAAAATGGTGATAAAAGAAGTTCTAAGACTTCATCCGCCCGTCCCACTTCTTCTACCAAGAGAAACAATGTCACATTTTAAGCTCAATGGTTATGATATTCATTCCAAAACCCATCTTTATGTGAATGCATGGGCAATTGGACGAGACCCAGAATGTTGGACAAACCCACTAGAGTTTTTCCCAGAGAGATTTATGGAAAGCAATATTGATTATAAAGGACAACATTTTGAGTTAATACCATTTGGAGCTGGTAGAAGAATTTGTCCAGGAATGAATATGGGGATTATTACTGTGGAGCTTGCATTAGCAAATATGCTGTTGTGCTTTAATTGGAAACTGCCCAATGGAATGAAGGAAGAGGATGTGGACATGGAAGAAGACACTGGTCTTTCAGCTTCCAAGAAATTGCCTCTTCAACTTCTTCCAATCCCTTACTTCAACTCGGATTATTAA | 1527 | 39.49 | MHYFIWVPLLFLLIPLFLLITKKLLHNNEKKVVNVPPPTPPKLPFLGHLHLLGSHPHRSLWNLSKKHGPIMLLKLGSVPTVIISSAAVARELFKHHDLASCSRPRLTGSGRFSYNFQDLNLSPYGERWRELRKIFILELFSTKRVQSFQHIREEEVGKLLKIISNSASLGTPIDLSQTIYTLTANITFRIAFGKSFSGGELDNENFQHIIRRAMVALGSFSATDFFPGVGWIIDRLSGVHGILEKSFAEVDAIFQQVVDDRIKFMEISRNEENIVDVLLRMERDSSEFDTVKFTQDRVKALIMDIFLAGVETGENTIVWAMTEIVRNPRVMKRLQDEIRSYIKEDRVKERDLEKLQYLKMVIKEVLRLHPPVPLLLPRETMSHFKLNGYDIHSKTHLYVNAWAIGRDPECWTNPLEFFPERFMESNIDYKGQHFELIPFGAGRRICPGMNMGIITVELALANMLLCFNWKLPNGMKEEDVDMEEDTGLSASKKLPLQLLPIPYFNSDY | 508 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 36247051 | 36249423 | - | CcPI632755_05g028630.1 | Cco05g2863 | 180491 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco05g2863 | 508 | Gene3D | Cytochrome P450 | 22 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | PRINTS | P450 superfamily signature | 437 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | Pfam | Cytochrome P450 | 37 | 487 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 439 | 448 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco05g2863 | 508 | FunFam | Cytochrome P450 83B1 | 22 | 499 | - | - | |
| Cco05g2863 | 508 | CDD | CYP71-like | 66 | 496 | - | - | |
| Cco05g2863 | 508 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | PRINTS | E-class P450 group I signature | 182 | 200 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | PRINTS | E-class P450 group I signature | 359 | 377 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | PRINTS | E-class P450 group I signature | 400 | 424 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | PRINTS | E-class P450 group I signature | 436 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | PRINTS | E-class P450 group I signature | 446 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | SUPERFAMILY | Cytochrome P450 | 37 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco05g2863 | 508 | PANTHER | CYTOCHROME P450 71B11-RELATED | 14 | 501 | IPR050193 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco03g0330 | Cco-Chr3:3651112 | Cco05g2863 | Cco-Chr5:36247051 | 2.10E-122 | dispersed | |
| Cco05g2863 | Cco-Chr5:36247051 | Cco05g2865 | Cco-Chr5:36271161 | 1.10E-213 | dispersed | |
| Cco05g2862 | Cco-Chr5:36229401 | Cco05g2863 | Cco-Chr5:36247051 | 3.80E-179 | tandem | |
| Cco05g2863 | Cco-Chr5:36247051 | Cco05g2864 | Cco-Chr5:36260138 | 5.30E-219 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco05g2863 | - | - | - | 0.0 |