Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco05g2863 ATGCATTATTTCATTTGGGTTCCCCTTCTTTTTCTGTTAATTCCTCTATTTCTTCTCATAACCAAAAAGCTTCTTCACAACAACGAGAAGAAGGTGGTTAATGTTCCTCCTCCAACCCCTCCAAAGCTTCCTTTTTTGGGTCATTTACACCTCCTTGGCTCTCACCCACATCGCTCTTTATGGAACCTTTCAAAAAAACACGGCCCCATCATGCTCCTCAAACTCGGCTCTGTTCCTACCGTCATCATATCTTCAGCAGCCGTCGCAAGAGAGCTATTCAAACACCACGATCTTGCTTCTTGCAGTCGCCCTCGCTTAACAGGCAGTGGAAGATTTTCATACAACTTTCAAGACCTAAATTTATCCCCATATGGTGAGCGTTGGAGAGAGCTTCGAAAGATTTTTATACTTGAACTCTTCAGCACTAAGCGAGTACAATCATTTCAACATATTAGAGAAGAGGAAGTGGGTAAGCTATTAAAGATCATATCTAATTCTGCATCTCTTGGAACTCCAATTGATTTGAGTCAAACCATATATACTCTTACTGCAAATATAACCTTCCGAATTGCTTTTGGTAAAAGCTTTAGTGGGGGAGAATTAGATAATGAGAATTTTCAACACATCATTCGTAGAGCAATGGTTGCATTAGGAAGCTTCTCGGCGACTGATTTCTTTCCTGGTGTGGGTTGGATTATTGATCGGCTGAGTGGTGTTCATGGGATATTGGAGAAGAGCTTTGCTGAAGTGGATGCCATTTTTCAACAGGTAGTTGATGATCGCATCAAATTCATGGAAATTTCTCGAAATGAAGAAAATATTGTTGATGTTTTGTTGAGAATGGAGAGAGACAGCTCGGAATTTGATACAGTGAAATTTACCCAAGATCGTGTTAAGGCACTTATCATGGATATATTTCTAGCTGGAGTGGAAACAGGAGAAAACACCATAGTTTGGGCAATGACAGAAATTGTTAGAAACCCAAGAGTGATGAAAAGGCTACAAGATGAGATCAGAAGCTACATCAAAGAAGATCGAGTGAAAGAAAGAGACCTTGAAAAGCTTCAATATTTAAAAATGGTGATAAAAGAAGTTCTAAGACTTCATCCGCCCGTCCCACTTCTTCTACCAAGAGAAACAATGTCACATTTTAAGCTCAATGGTTATGATATTCATTCCAAAACCCATCTTTATGTGAATGCATGGGCAATTGGACGAGACCCAGAATGTTGGACAAACCCACTAGAGTTTTTCCCAGAGAGATTTATGGAAAGCAATATTGATTATAAAGGACAACATTTTGAGTTAATACCATTTGGAGCTGGTAGAAGAATTTGTCCAGGAATGAATATGGGGATTATTACTGTGGAGCTTGCATTAGCAAATATGCTGTTGTGCTTTAATTGGAAACTGCCCAATGGAATGAAGGAAGAGGATGTGGACATGGAAGAAGACACTGGTCTTTCAGCTTCCAAGAAATTGCCTCTTCAACTTCTTCCAATCCCTTACTTCAACTCGGATTATTAA 1527 39.49 MHYFIWVPLLFLLIPLFLLITKKLLHNNEKKVVNVPPPTPPKLPFLGHLHLLGSHPHRSLWNLSKKHGPIMLLKLGSVPTVIISSAAVARELFKHHDLASCSRPRLTGSGRFSYNFQDLNLSPYGERWRELRKIFILELFSTKRVQSFQHIREEEVGKLLKIISNSASLGTPIDLSQTIYTLTANITFRIAFGKSFSGGELDNENFQHIIRRAMVALGSFSATDFFPGVGWIIDRLSGVHGILEKSFAEVDAIFQQVVDDRIKFMEISRNEENIVDVLLRMERDSSEFDTVKFTQDRVKALIMDIFLAGVETGENTIVWAMTEIVRNPRVMKRLQDEIRSYIKEDRVKERDLEKLQYLKMVIKEVLRLHPPVPLLLPRETMSHFKLNGYDIHSKTHLYVNAWAIGRDPECWTNPLEFFPERFMESNIDYKGQHFELIPFGAGRRICPGMNMGIITVELALANMLLCFNWKLPNGMKEEDVDMEEDTGLSASKKLPLQLLPIPYFNSDY 508
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 36247051 36249423 - CcPI632755_05g028630.1 Cco05g2863 180491
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco05g2863 508 Gene3D Cytochrome P450 22 498 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 Pfam Cytochrome P450 37 487 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco05g2863 508 FunFam Cytochrome P450 83B1 22 499 - -
Cco05g2863 508 CDD CYP71-like 66 496 - -
Cco05g2863 508 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 SUPERFAMILY Cytochrome P450 37 501 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco05g2863 508 PANTHER CYTOCHROME P450 71B11-RELATED 14 501 IPR050193 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g0330 Cco-Chr3:3651112 Cco05g2863 Cco-Chr5:36247051 2.10E-122 dispersed
Cco05g2863 Cco-Chr5:36247051 Cco05g2865 Cco-Chr5:36271161 1.10E-213 dispersed
Cco05g2862 Cco-Chr5:36229401 Cco05g2863 Cco-Chr5:36247051 3.80E-179 tandem
Cco05g2863 Cco-Chr5:36247051 Cco05g2864 Cco-Chr5:36260138 5.30E-219 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco05g2863 - - - 0.0