Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco05g2865 | ATGCATATCCTTTCCATCTGGGTCCTTTCTCTTCTCCTTCTCTTGTGTTCTCTGATATTGCTTCTTAAAACAAACAAGAATGTTGAAAAACACAAGAATAATAAGCTTAAAATTGTTCCTCCTCCTACCCCTCCAAAGCTTCCTTTGTTGGGTCATTTACACCTCATTGGCTCTCACCCCCATCGCTCCTTATGGAACCTTTCAAAAACACATGGCCCCATCATGCTCCTCAAATTCGGCTCGGTCCCCACCGTCGTGATCTCTTCAGCAGCCGTCGCACAAGAGTTGTTCAAACAACACGACCTTGCTTCTTGCAGCCGCCCTCGCTTAGCCGCCACAGCAAGATATTCATACAACTACTTAGACTTGATTTTTTCCCCATACGGTAATCATTGGAGGGAGGTTCGAAAGATTTGTATTCTCGAGCTGTTTAGTGCCAAACGCGTGCAATCTTTTCAGCATATTAGAGAAGAAGAAATGAATTTATTATTGAATTCCATCTCCCAATCCTCATCTTCTTCAACTTTAGTTGATTTGAAGGAAAAATCTTATTCTCTCACGGCTAATATATTGACCCGGATTGCTTTTGGGAAGAGCTTTAGAGGGAGTGAACTAGATAATGAGAATTTCGAAGGGGTTATACAAAGAGCAAGCGCAGCATTGGGAAGCTTCTCGGCGAGTGATTTATTTCCTAGTTTCGGGTGGATTATTGGTCGGCTTAACGGTGTTCATGAGCGACTGGAGAAAAGCTTTGCGGAGTTGGATGCTTTTTTAGAACATGTAATCAAGGATCGCATTGACTTTTGGAAGGCTTCTCAAAAGGAAGAAAATTTTGTTGATGTTTTGTTGAGAATGGAGAGAGATTGCTCTGAATTTGGTGCAACCAAATTCACCCGAGATTGCATCAAGGCACTTGTCATGGATATATTTCTAGCTGGAGTGGAAACAGGAGCAAACATGATGGTTTGGGCAATGACAGAGCTTGTTAAGAATTCAAAGGTGATGAAGAAAGTACAAGATGAGATCAGAAGCTGCATAAAAGAAGATCGAGTGAAGGAAAGCGAGCTGGAAAAGCTTGGATATCTAAAAATGGTAGTGAAGGAGGTTTTAAGGCTTCATGCGCCACTTCCACTTCTCCTTCCAAGAGAAACAATGTCACATTTTAAGTTGAATGGTTATGATATTCAACCCAAAACTCATGTTCATGTGAATGTATGGGCAATTGGACGAGACCCAGAAACTTGGACAAGCCCACAAGAATTTCTTCCGGAGAGATTTATGGAAAGCAATATTGATTACAAAGGACAACATTTTGAGTTAATACCATTTGGAGCTGGAAGAAGAATCTGTCCTGGTGTGAATATGGGAATTGCAACGGTAGAACTGGCATTGGCAAATATGTTGTTGTGCTTTGATTGGAAATTACCAAATGGAATGAAAGTAGAAGATGTAGACATGGATGAAGATTTTGGTATTACAGTTACCAAGAAATCACCTCTTCAACTTCTTCCAATTCCTTACTTCAAATCCTATTGA | 1536 | 40.76 | MHILSIWVLSLLLLLCSLILLLKTNKNVEKHKNNKLKIVPPPTPPKLPLLGHLHLIGSHPHRSLWNLSKTHGPIMLLKFGSVPTVVISSAAVAQELFKQHDLASCSRPRLAATARYSYNYLDLIFSPYGNHWREVRKICILELFSAKRVQSFQHIREEEMNLLLNSISQSSSSSTLVDLKEKSYSLTANILTRIAFGKSFRGSELDNENFEGVIQRASAALGSFSASDLFPSFGWIIGRLNGVHERLEKSFAELDAFLEHVIKDRIDFWKASQKEENFVDVLLRMERDCSEFGATKFTRDCIKALVMDIFLAGVETGANMMVWAMTELVKNSKVMKKVQDEIRSCIKEDRVKESELEKLGYLKMVVKEVLRLHAPLPLLLPRETMSHFKLNGYDIQPKTHVHVNVWAIGRDPETWTSPQEFLPERFMESNIDYKGQHFELIPFGAGRRICPGVNMGIATVELALANMLLCFDWKLPNGMKVEDVDMDEDFGITVTKKSPLQLLPIPYFKSY | 511 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 36271161 | 36273485 | - | CcPI632755_05g028650.1 | Cco05g2865 | 180493 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco05g2865 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 443 | 452 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Cco05g2865 | 511 | Gene3D | Cytochrome P450 | 25 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | PRINTS | E-class P450 group I signature | 363 | 381 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | PRINTS | E-class P450 group I signature | 186 | 204 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | PRINTS | E-class P450 group I signature | 404 | 428 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | SUPERFAMILY | Cytochrome P450 | 41 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | CDD | CYP71-like | 70 | 500 | - | - | |
Cco05g2865 | 511 | Pfam | Cytochrome P450 | 41 | 498 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | PANTHER | CYTOCHROME P450 71B11-RELATED | 19 | 505 | IPR050193 | - | |
Cco05g2865 | 511 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | PRINTS | P450 superfamily signature | 364 | 375 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco05g2865 | 511 | FunFam | Cytochrome P450 83B1 | 26 | 503 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco03g0329 | Cco-Chr3:3635862 | Cco05g2865 | Cco-Chr5:36271161 | 2.60E-117 | dispersed | |
Cco05g2863 | Cco-Chr5:36247051 | Cco05g2865 | Cco-Chr5:36271161 | 1.10E-213 | dispersed | |
Cco05g2865 | Cco-Chr5:36271161 | Cco05g2867 | Cco-Chr5:36293239 | 9.30E-115 | dispersed | |
Cco05g2864 | Cco-Chr5:36260138 | Cco05g2865 | Cco-Chr5:36271161 | 5.40E-248 | tandem | |
Cco05g2865 | Cco-Chr5:36271161 | Cco05g2866 | Cco-Chr5:36285927 | 2.10E-175 | tandem | |
Cco02g0504 | Cco-Chr2:4689928 | Cco05g2865 | Cco-Chr5:36271161 | 8.80E-31 | transposed | |
Cco06g1768 | Cco-Chr6:28129559 | Cco05g2865 | Cco-Chr5:36271161 | 9.20E-86 | transposed | |
Cco07g1274 | Cco-Chr7:26758986 | Cco05g2865 | Cco-Chr5:36271161 | 1.00E-09 | transposed | |
Cco07g1534 | Cco-Chr7:29368898 | Cco05g2865 | Cco-Chr5:36271161 | 2.70E-37 | transposed | |
Cco10g1624 | Cco-Chr10:29607769 | Cco05g2865 | Cco-Chr5:36271161 | 9.00E-86 | transposed | |
Cco10g1935 | Cco-Chr10:32920724 | Cco05g2865 | Cco-Chr5:36271161 | 9.00E-81 | transposed | |
Cco02g0878 | Cco-Chr2:10491878 | Cco05g2865 | Cco-Chr5:36271161 | 8.90E-64 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco05g2865 | - | - | - | 0.0 |