Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco05g2873 | ATGGCGGAAACCGGCGTATATGGCCGTTTCCTGGCGGGGAGTTTAGACCCAAGAGCCCAAGAGTTCCGGCCAAGGCATTCCACCACTCTGTTCATGCCGCAGCCCCATCGGGTTTTCTTTCCGTACCCACCAATTGCTGATGTTCCTCTCCTGCCGTACTGCGACGGCGGTGTAACTTACGCGCAATTTCCAGCGGCGGAGCCGGCGTACTTCCCGATGCGGTTGCCGGTGTCGTCGGTTGCGACTCGGTCGCTGGTGGTGAGTTCGGTTCCTTGCGACGTAAGCGAGATGATGGTGAGAAGGGAATTGGAAGCGTTTGGGGAGGTCCGAGGAGTGCAAATGGAGAGAGTTAAAGAAGGGATTGTAATTGTTCATTTCTATGATATTCGCCACGCCGAGAGAGCTTTGCGAGAGATTCGGGATCAGCACATGCACCATCAATGTCGTCTTCGTACCTACTTCAACAGCAATAATAACGGTTTCTTGTTTTCAAATTCCCCTCTCCCTCGCCCTTCTCCGACGCCTGGCCTCATCGCCGGCCATGCTGTCTGGGCTCAGTTTATCGTTCCGGCTGGCAAGAATCAGGGCACCATCGTCGTCTTCAATTTGGATTCCACCGTTTCCACTTCTTGTCTCAGAGAAATCTTCGAGGCTTTTGGACCCGTGAAGGAGTTGAGAGAGACGCCATTGAAGAAACAACAAAGGTTCGTTGAATTTTTCGACATCAGGGACGCTGGAAACGCTCTTAAGGAGATGAACGGAAAGGAAATCAATGGAAAACCGGTTGTTATTGAGTTCAGTCGGGCGGGAGGTCATGGCAACAAGTTCTTCAATGCCAACTTGACTGCTCCGGCCATCTGCGGCTCGAATAATATATACTCCAGGAGTCTAAAATGCCCACCGCCGCCGCCGAGAAATTTCTCTGGTGGGGCAGCTTCAAATGTTCCGCCACGCTGGTGTTATTCGAAACCCCATAGTTCTAGGAAATTGAATCCGAGGAAGGGGAATCGAAGCCCGAGAAACCCCAGGCAAAGCTTGGAGGCCGAGGATGTGAATGGAAAAATGGCTTCCCTCGATTTGGAAGGCGGCGGTGTGTGTACTGAAATTGAAGAGAGAGAATCATGTGAGGTTTTGAGAAAGAATTCAAAGACCAGCCACAGTAGTCCCGTTGTAGCTGCTGACCAACAACAACAACTGCAGCCCAGTAGGAATAAGCTAAGGAAATGTAGACCGTCTAGGAAATTCGATACTCGATTCCTGATAAACAATAACGACTCCGATTGCAAAGATTCGAGAACCACTGTGATGATCAAGAACATCCCTAACAAGTACAGTCAGAAATTGTTGTTGAACATGCTGGACAATCATTGCATTCACTGCAACGAGCAGATGGGCGATGGCCATAACCAACCACTTTCCTCCTACGATTTTGTATATCTCCCCATTGATTTCAACAACAAGTGCAATGTTGGATATGGGTTTGTAAACATGACCTCACCGGAGGCCACATGGAGGTTGTACAAGGCGTTTCATCTTCAACCTTGGGAGGTTTTCAACTCAAGAAAAATCTGTGAAGTCACCTATGCTAGAGTACAGGGACTGGAATCTCTGAAGGAGCACTTTAAGAACTCAAAGTTCCCATGCGAGATGGACCACTACCTGCCAGTAGTGTTTTCACCGCCTCGGGACGGGAGGCTACTGACGGAGCCACTGCCGATTGGCGGCGGCCAGAGACAGCCCGTCTCCATTGGCTTCTCAACTACTACTCTATCTTCTGGGAATGCTGAGATGGACGGTGAAGATGATGTTGCAATTGCGACAACACTGGTTGACCAACAAGAGGAAGGCATGAATGGAAGCAGCAGTAGCAAAAGTGGCGGTGGTGTTGACGAAGAATACGACGGTGATGAGTCTCAAGGCCTTTTAATTTGGGTGTTTTCCCCAGATGATAAAAAGGGCAGAAGGAGAATAGTGAAGAAGTCCGTACGAATGGGAAGAAAGAAACAGTATTATGGCATTATGGGAAAGAAGAAAAATGGGCTTTTCAGATATGCTGATTGGGTGGATAAGTTGCTGATTTTAATGGGTTCTTTAGGGAGTATTGGAGATGGGATTACAACTCCACTCACTATGATTGTTCTCAGTGGTATGATCAATAACTATTCTGCCTCTGATTCCAACTCTTTTTCCAATCATGTAGTGGACAAGTATGCACTCAATCTGCTTTATATTGCTATTGGAGTTGGACTCTGTGCTTTCTTTGAGGGAGTGTGCTGGACTAGGACAGCAGAAAGACAGACATCTCGTATGAGAATGGAGTACCTAAAATCAGTTTTGAGACAAGAAGCTGGTTTTTTCGACAGTAATCAAGCCGCTTCTTCTACATTCCTTATTGTTTCCTCCATCACTTGTGATTGCCACACTATCCAAGATACCATAGCTGAAAAGATACCAAACTTTCTGGCTCACGTCTCCGGCTTTATCTTCTGCATTCCTGTTGCATTTATGCTCTCATGGAAGCTTGCTTTGGCTGCCCTTCCATTCTCTCTCATGTTTGTTATTCCAGGGGTTGGATTTGGGAAGGTTTACAAGAACTTAGGTATCAAGGCCAAAGAGTCTTATGTGGTTGCTGGTAGCATTGCCGAACAAGCGGTCTCTTCGATACGCACTGTGTATTCATATGTAGGAGAGCTCCAAACTCTAGAGAAGTTCAGTCATGCACTTCAAAAAAGTATGAACTTTGGCACTAAACAAGGCCTTGGGAAAGGACTTATGATGGGCAGCATGGCAATGATATATGCTGCTTGGGCATTTCAGGCATGGATAGGCAGTATTCTTGTCACTGAAAGAGGAGAAACAGGTGGAGCTATTTTGATATCTGGAATATGTATCATTTTTGGTGGACTGTGTGCTATGAATGCACTCCCAAATCTCTCTTTCATCTCTGAGTCAACAATTGCTGCATCTCGCATTTTTGAAATGACTGACCGCGTTCCCACCATAGATGCTGAAGATGGTAGAGGAAAATCTTTGGACTATTTAAGAGGAAAAATTGAATTTAGAGATGTTGAATTTTCCTATCCTTCCAGACCGGCAACCCCCATTCTTCAAGGACTTAATCTCAAAATAAAGGCCGGGGAGACAGTAGGCCTTGTTGGAGGTAGTGGCTCAGGCAAGTCCACTGTGATTCATTTATTGGAGAGATTCTATGACCCTGTCAAAGGAGACATTCTTCTTGATGGTCATAAGATAAAGAAGCTTCAGCTCAAATGGCTGAGATCCCAAATGGGATTAGTCAATCAAGAGCCAATTCTATTTGCAACCTCCATAAAGGAAAATATTTTGTTTGGTAAGGAAGGAGCTTCAATGCAACTTGTTAAAAGAGCAGCTAAGGCTGCAAATGCTCATGATTTCATTGCAACATTACCTGATGGATATGAGACTCAAGTGGGGCAATTTGGTGTTCAATTGTCTGGAGGGCAAAAGCAAAGAATTGCAATAGCTAGGGCTCTAATCAGAGATCCCAAAATTCTTCTATTGGATGAAGCAACCAGTGCTTTGGATGCAGAGTCTGAAAGAATTGTACAAGATGCCCTGGACCAAGTTTCACATGGAAGGACTACCATTGTCATTGCGCACCGTCTCTTGACTATCCAAAAGGCTGATCAGATTCTTGTTCTTCAGTCAGGTAGAGTGGTAGAGTCTGGTTCTCATGAGGAGTTACTTCAAAGAAATAATGAAGGAATTTACAGAAAAATGGTGCAATTGCAGCAATCTTGTATGGAAAATGAAGCTTCTAGTTCTTTGTATCATTCTACTAGAGAAACAAATCTCCAACAAATAGTAGGAGCCAAAACTCCCTTGACACCAATAAACCAAATATCAGTTCGTCGAAGCAGCCCAATCTGGCACAGCAGTCCAGTATATTCCATCAGCATGTCATCTCCATACTCGGTCGACGTTGACTCTAGTGATTACAGTTATTGTGAAGGCTTGAAGAATACCTCGAGTTCTTCTCAATCTCCTTTGCAATGGCGCCTCTGGAGATTGAATGCACCTGAGTGGAAACAAGCATTACTTGGTTGTATGGGTGCTATAGGCACTGGAGTTACTCAGCCAATATATTCCTATTGCTTAGGAACAATCACCTCAGTTTACTTCCTAAAGGACAGTGAGGCTATTAAATCAAACATTAGATTCTATTGCTTCATATTTTTAGGCATAACAGTTCTTAGTTGTATATCCAATCTAGTCCAGCATTACAGCTTTGCAATCATGGGAGAAAATTTAACCAAGAGGGTGAGAGAAAAAATGCTTGAAAAAATCATGACCTTTGAGATTGGATGGTTTGATCAAGACGAGAATACAAGTGCCGCGATATGTGCACGACTAGCTGTTGAAGGAAACTTGGTTAGATCTCTTGTAGCAGAAAGAACATCACTATTGGTTCAGGTAGTTGTGACTGCCACATTCGCATTTGTGCTTGGGTTAGTTGTGACATGGAGAGTAGCCATTGTAGCAATTGCTATGCAGCCACTTATTATTGGAAGCTTCTATTCAAGAAAGGTTCTGATGAGAAGTATATCTGAGAAGGCTAGGAAATCACAAGGTGAAGGCAGTCAACTAGCTAGTGAAGCCATTACCAACCACAGAACTATTGCTGCATTTTCTTCTCAAGATAGGATTTTGAGTCTGTTTGAAGCTTCAATGGAATCTCCCAAGAAGGAGAGTGCAAAACAATCATGGATTTCGGGTTTTGGTTTATTCAGCTCCCTATTTCTTACTACAGCAACAACAGCTTTGACACTGTGGTATGGAGGGAGACTAATAAATCAAGGATTAGTAACATCAAAACAACTTTTCCAAGCATTTTTCATCTTGATGAGCACTGGAAAGAACATTGCAGATGTAGGAAGCATGTCATCAGATATAGCAAAAGGTGCAAATGCCATAGGATCAATTTTTGGAATCCTAGATAGAGAAACTGAAATAGACCCTCAACAACTTGAAGGGTTAAAAGTTAAAGAGACAATTTGTGGAGAAGTAGAATTGAAGAATGTATTTTTCGCTTACCCGGCTAGGCCTGACCAATTGATCTTCAAGGGACTGAATCTAAAGATTGAAGCTGGAACAACAGTTGCGCTGGTTGGGCAGAGTGGTTCGGGTAAATCTACTGCCATTGGATTGATCGAAAGATTTTATGATCCTCAAAAGGGAGTAGTCCTCATTGATGGAATAGACATCAAGAGCTATAATCTGAGAAGTTTGAGGTCACACATTGCTCTAGTGAGTCAAGAACCCACACTTTTCGCAGGAAGTATACGCAATAACATTCTATTCGGGCAAGATGAACGTTCCGAAAACGAAATTAGGAAGGCTGCAAAACTTGCCAACGCTCATGAGTTCATTAGTTGTATGAAGGATGGGTATGATACTCAATGTGGAGAAAGAGGAGTTCAGTTATCAGGAGGTCAGAAGCAGAGAATAGCTTTAGCAAGAGCCATACTGAAGAATCCAAAAATCCTTCTACTAGATGAGGCAACCAGTGCTTTGGATAGCCTGTCACAGACTTTAGTCCAAGAAGCATTGGAAAAGATGATGGTTGGTAGAACAAGCCTCGTCGTCGCTCATCGATTATCGACTATACAGAAAGCAGATTCAATAGCTGTAACAAAGCAAGGTAAGGGCGTTCGCAGAGGAATATGGCATAACCATCCAAAACTTGACTGCATACTACGCCCAAGGGAATGGGCAAGCCGAGGCCAGCAACAAGCTTTTAATCAATATATCTCCTCTCCTTTGAGCCCGTCATGA | 5814 | 44.1 | MAETGVYGRFLAGSLDPRAQEFRPRHSTTLFMPQPHRVFFPYPPIADVPLLPYCDGGVTYAQFPAAEPAYFPMRLPVSSVATRSLVVSSVPCDVSEMMVRRELEAFGEVRGVQMERVKEGIVIVHFYDIRHAERALREIRDQHMHHQCRLRTYFNSNNNGFLFSNSPLPRPSPTPGLIAGHAVWAQFIVPAGKNQGTIVVFNLDSTVSTSCLREIFEAFGPVKELRETPLKKQQRFVEFFDIRDAGNALKEMNGKEINGKPVVIEFSRAGGHGNKFFNANLTAPAICGSNNIYSRSLKCPPPPPRNFSGGAASNVPPRWCYSKPHSSRKLNPRKGNRSPRNPRQSLEAEDVNGKMASLDLEGGGVCTEIEERESCEVLRKNSKTSHSSPVVAADQQQQLQPSRNKLRKCRPSRKFDTRFLINNNDSDCKDSRTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQMGDGHNQPLSSYDFVYLPIDFNNKCNVGYGFVNMTSPEATWRLYKAFHLQPWEVFNSRKICEVTYARVQGLESLKEHFKNSKFPCEMDHYLPVVFSPPRDGRLLTEPLPIGGGQRQPVSIGFSTTTLSSGNAEMDGEDDVAIATTLVDQQEEGMNGSSSSKSGGGVDEEYDGDESQGLLIWVFSPDDKKGRRRIVKKSVRMGRKKQYYGIMGKKKNGLFRYADWVDKLLILMGSLGSIGDGITTPLTMIVLSGMINNYSASDSNSFSNHVVDKYALNLLYIAIGVGLCAFFEGVCWTRTAERQTSRMRMEYLKSVLRQEAGFFDSNQAASSTFLIVSSITCDCHTIQDTIAEKIPNFLAHVSGFIFCIPVAFMLSWKLALAALPFSLMFVIPGVGFGKVYKNLGIKAKESYVVAGSIAEQAVSSIRTVYSYVGELQTLEKFSHALQKSMNFGTKQGLGKGLMMGSMAMIYAAWAFQAWIGSILVTERGETGGAILISGICIIFGGLCAMNALPNLSFISESTIAASRIFEMTDRVPTIDAEDGRGKSLDYLRGKIEFRDVEFSYPSRPATPILQGLNLKIKAGETVGLVGGSGSGKSTVIHLLERFYDPVKGDILLDGHKIKKLQLKWLRSQMGLVNQEPILFATSIKENILFGKEGASMQLVKRAAKAANAHDFIATLPDGYETQVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQDALDQVSHGRTTIVIAHRLLTIQKADQILVLQSGRVVESGSHEELLQRNNEGIYRKMVQLQQSCMENEASSSLYHSTRETNLQQIVGAKTPLTPINQISVRRSSPIWHSSPVYSISMSSPYSVDVDSSDYSYCEGLKNTSSSSQSPLQWRLWRLNAPEWKQALLGCMGAIGTGVTQPIYSYCLGTITSVYFLKDSEAIKSNIRFYCFIFLGITVLSCISNLVQHYSFAIMGENLTKRVREKMLEKIMTFEIGWFDQDENTSAAICARLAVEGNLVRSLVAERTSLLVQVVVTATFAFVLGLVVTWRVAIVAIAMQPLIIGSFYSRKVLMRSISEKARKSQGEGSQLASEAITNHRTIAAFSSQDRILSLFEASMESPKKESAKQSWISGFGLFSSLFLTTATTALTLWYGGRLINQGLVTSKQLFQAFFILMSTGKNIADVGSMSSDIAKGANAIGSIFGILDRETEIDPQQLEGLKVKETICGEVELKNVFFAYPARPDQLIFKGLNLKIEAGTTVALVGQSGSGKSTAIGLIERFYDPQKGVVLIDGIDIKSYNLRSLRSHIALVSQEPTLFAGSIRNNILFGQDERSENEIRKAAKLANAHEFISCMKDGYDTQCGERGVQLSGGQKQRIALARAILKNPKILLLDEATSALDSLSQTLVQEALEKMMVGRTSLVVAHRLSTIQKADSIAVTKQGKGVRRGIWHNHPKLDCILRPREWASRGQQQAFNQYISSPLSPS | 1937 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 36342965 | 36356026 | - | CcPI632755_05g028730.1 | Cco05g2873 | 180501 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco05g2873 | 1937 | Gene3D | ABC transporter type 1, transmembrane domain | 740 | 1591 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cco05g2873 | 1937 | ProSitePatterns | ABC transporters family signature. | 1821 | 1835 | IPR017871 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cco05g2873 | 1937 | Pfam | ABC transporter | 1036 | 1185 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cco05g2873 | 1937 | FunFam | ABC transporter B family member 4 | 1008 | 1265 | - | - | |
| Cco05g2873 | 1937 | MobiDBLite | consensus disorder prediction | 611 | 627 | - | - | |
| Cco05g2873 | 1937 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 83 | 157 | IPR000504 | GO:0003723(InterPro) | |
| Cco05g2873 | 1937 | SUPERFAMILY | ABC transporter transmembrane region | 681 | 1002 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cco05g2873 | 1937 | MobiDBLite | consensus disorder prediction | 381 | 405 | - | - | |
| Cco05g2873 | 1937 | Gene3D | - | 1672 | 1915 | IPR027417 | - | |
| Cco05g2873 | 1937 | MobiDBLite | consensus disorder prediction | 610 | 635 | - | - | |
| Cco05g2873 | 1937 | Pfam | RNA recognition motif 2 | 432 | 542 | IPR007201 | - | |
| Cco05g2873 | 1937 | Pfam | ABC transporter transmembrane region | 695 | 955 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cco05g2873 | 1937 | Pfam | ABC transporter transmembrane region | 1360 | 1629 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cco05g2873 | 1937 | MobiDBLite | consensus disorder prediction | 379 | 406 | - | - | |
| Cco05g2873 | 1937 | Gene3D | - | 78 | 155 | IPR012677 | - | |
| Cco05g2873 | 1937 | Pfam | RNA recognition motif | 198 | 262 | IPR000504 | GO:0003723(InterPro) | |
| Cco05g2873 | 1937 | CDD | ABC_MTABC3_MDL1_MDL2 | 1682 | 1900 | - | - | |
| Cco05g2873 | 1937 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 693 | 991 | - | - | |
| Cco05g2873 | 1937 | SMART | AAA_5 | 1709 | 1881 | IPR003593 | GO:0016887(InterPro) | |
| Cco05g2873 | 1937 | SMART | AAA_5 | 1045 | 1231 | IPR003593 | GO:0016887(InterPro) | |
| Cco05g2873 | 1937 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 196 | 269 | IPR000504 | GO:0003723(InterPro) | |
| Cco05g2873 | 1937 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1676 | 1902 | IPR027417 | - | |
| Cco05g2873 | 1937 | SUPERFAMILY | RNA-binding domain, RBD | 83 | 269 | IPR035979 | GO:0003676(InterPro) | |
| Cco05g2873 | 1937 | SUPERFAMILY | ABC transporter transmembrane region | 1346 | 1665 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cco05g2873 | 1937 | FunFam | ABC transporter B family member 4 | 1618 | 1908 | - | - | |
| Cco05g2873 | 1937 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 1348 | 1664 | - | - | |
| Cco05g2873 | 1937 | PANTHER | ABC TRANSPORTER B FAMILY | 672 | 1281 | IPR039421 | GO:0005887(PANTHER)|GO:0042626(PANTHER) | |
| Cco05g2873 | 1937 | MobiDBLite | consensus disorder prediction | 319 | 352 | - | - | |
| Cco05g2873 | 1937 | Pfam | ABC transporter | 1701 | 1849 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cco05g2873 | 1937 | CDD | ABC_MTABC3_MDL1_MDL2 | 1018 | 1257 | - | - | |
| Cco05g2873 | 1937 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 1359 | 1646 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cco05g2873 | 1937 | Gene3D | - | 191 | 275 | IPR012677 | - | |
| Cco05g2873 | 1937 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1018 | 1254 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cco05g2873 | 1937 | SUPERFAMILY | RNA-binding domain, RBD | 411 | 514 | IPR035979 | GO:0003676(InterPro) | |
| Cco05g2873 | 1937 | SMART | rrm1_1 | 197 | 265 | IPR000504 | GO:0003723(InterPro) | |
| Cco05g2873 | 1937 | SMART | rrm1_1 | 84 | 153 | IPR000504 | GO:0003723(InterPro) | |
| Cco05g2873 | 1937 | ProSitePatterns | ABC transporters family signature. | 1157 | 1171 | IPR017871 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cco05g2873 | 1937 | Gene3D | - | 1016 | 1277 | IPR027417 | - | |
| Cco05g2873 | 1937 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1682 | 1918 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cco05g2873 | 1937 | FunFam | Terminal EAR1-like 1 | 385 | 538 | - | - | |
| Cco05g2873 | 1937 | CDD | RRM3_EAR1_like | 432 | 533 | IPR034458 | - | |
| Cco05g2873 | 1937 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 694 | 983 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cco05g2873 | 1937 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1010 | 1257 | IPR027417 | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco05g2873 | K05658 | - | - | csv:101217411 | 2075.83 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco03g0949 | Cco-Chr3:12284003 | Cco05g2873 | Cco-Chr5:36342965 | 1.70E-27 | dispersed | |
| Cco05g2873 | Cco-Chr5:36342965 | Cco09g2035 | Cco-Chr9:34649838 | 7.70E-287 | dispersed | |
| Cco03g1674 | Cco-Chr3:31381692 | Cco05g2873 | Cco-Chr5:36342965 | 0.00E+00 | transposed | |
| Cco05g1684 | Cco-Chr5:24379726 | Cco05g2873 | Cco-Chr5:36342965 | 0.00E+00 | transposed | |
| Cco06g0168 | Cco-Chr6:1719877 | Cco05g2873 | Cco-Chr5:36342965 | 7.40E-12 | transposed | |
| Cco09g2064 | Cco-Chr9:35085103 | Cco05g2873 | Cco-Chr5:36342965 | 0.00E+00 | transposed | |
| Cco09g2137 | Cco-Chr9:35750606 | Cco05g2873 | Cco-Chr5:36342965 | 1.10E-62 | transposed | |
| Cco05g2873 | Cco-Chr5:36342965 | Cco08g1929 | Cco-Chr8:30222193 | 3.90E-145 | wgd |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi1g598 | . | . | . | . | . | . | Bma14g01833 | . | . | . | . | . | . | . | Sed04g0552 | . | Cpe01g01579 | Bhi07g01835 | Tan04g0132 | Cmetu10g1346 | Lac13g0115 | Hepe10g0058 | . | . | Cla05g02618 | Cam05g2805 | Cec05g2841 | Cco05g2873 | Clacu05g2809 | Cmu05g2657 | Cre05g2773 | . | . | . | . | Lsi04g00631 | Csa05g02256 | Chy10g00826 | Cme10g00605 | Blo06g00838 | . | Bda07g01649 | . | . | . | . | . | . | . | . | Cma04g01791 | Cma05g00053 | Car04g01806 | Car05g00041 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0000338 | 3 | 4 | 5 | 4 | 3 | 4 | 2 | 4 | 4 | 4 | 4 | 4 | 7 | 4 | 4 | 8 | 4 | 5 | 4 | 4 | 4 | 4 | 6 | 4 | 4 | 4 | 7 | 6 | 4 | 8 | 136 |