Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g0054 ATGGGCGGCGGAGGTGAAGGAACGACGCTGGAATTCACTCCGACGTGGGTTGTAGCCGCCGTCTGTACCGTCATCGTCGCCATTTCGCTCGCTTTAGAGCGTCTCCTTCACTTCCTCGGCAAATACCTCAAGAAGAAGAATCAGAAGCCGCTCAATGAAGCTCTTCAGAAAGTTAAAGAAGAATTGATGCTTTTGGGGTTTATTTCGCTTCTGCTCACTGTATTTCAAGGCACCATCTCTAAATTGTGTGTTCCTGAGAGTTTGACTGAGCATTTACTTCCGTGTGATCTGAAGGATAAAGCTAAAGCTGAACATGGTTCGCCCTCGGGTGAAACTGGTTCGTCAACGACAACGCATTTTCAAACGTTCTTTGTTTCGAGTATTTCTGGTACGGCCAGGCGCCTTCTTTCTGAGGGATCGGCTTCACAGACTGGTTATTGTGCCAAAAAGAATAAGGTGCCATTGCTATCACTTGAAGCATTGCATCATCTACATATTTTTATCTTCATCCTAGCTATCGTCCATGTGACATTTTGCGTTCTCACTGTAGTTTTTGGAGGATTGAAGATTCGTCAGTGGAAGCATTGGGAGGATTCTATTGCAAAAGAGAATTATGATACCGAACAAGTTCTAAAACCAAAAGTCACCCATGTCCATCAACATGCTTTTATCAAGGACCACTTTTTGGGCTTTGGTAAAGATTCAGCTCTTCTTGGTTGGTTGCATTCCTTCCTCAAGCAATTTTATGCTTCTGTAACAAAATCAGATTATGCAACGTTACGGCTTGGTTTCATTATGACGCACTGCAGGGGAAACCCGAAGTTTAATTTTCACAAGTACATGATACGTGCTCTTGAAGATGACTTCAAGCATGTTGTTGGTATCAGTTGGTATCTTTGGATATTCGTGGTTGTCTTCTTGTTCCTTAATGTTAGTGGTTGGCATACATATTTCTGGATAGCATTCATTCCTTTCATTCTTCTGCTCGCTGTGGGAACGAAGCTGGAACATGTGATAACCCAGCTGGCTCATGAGGTTGCAGAGAAGCATGTAGCAATCGAAGGTGATCTAGTAGTCCAACCATCCGATGATCACTTTTGGTTTCATCGTCCCCGTATTGTTCTCTTCTTGATCCACTTTATACTTTTCCAAAACGCTTTTGAGATTGGATTCTTCTTCTGGATATGGGTTCAATATGGCTTTGACTCGTGCATCATGGGACAAGTCCGCTATATCATTCCAAGGCTCATCATTGGGGTATTTGTTCAGGTTCTTTGCAGCTACAGCACCCTACCGCTCTACGCCATTGTCACTCAGATGGGAAGTTCTTTCAAGAAAGCAATATTTGATGAACATGTACAAGTAGGCCTAGTTGGTTGGGCTCAGAAGGTGAAGAAAAGAAAAGGACTTAGAGCAGCTGCTGATGGGTCCAGCCAAGGAGGGAAGGAAGGTGGTTCTACTGTGGGGATTCAACTGGGAAATGTTATGCGCAAGGCTTCTGCTCCTAGTGAAATTAAGCCTGATGACTCCAAATCAAACGATCTGCCTTAG 1551 43.84 MGGGGEGTTLEFTPTWVVAAVCTVIVAISLALERLLHFLGKYLKKKNQKPLNEALQKVKEELMLLGFISLLLTVFQGTISKLCVPESLTEHLLPCDLKDKAKAEHGSPSGETGSSTTTHFQTFFVSSISGTARRLLSEGSASQTGYCAKKNKVPLLSLEALHHLHIFIFILAIVHVTFCVLTVVFGGLKIRQWKHWEDSIAKENYDTEQVLKPKVTHVHQHAFIKDHFLGFGKDSALLGWLHSFLKQFYASVTKSDYATLRLGFIMTHCRGNPKFNFHKYMIRALEDDFKHVVGISWYLWIFVVVFLFLNVSGWHTYFWIAFIPFILLLAVGTKLEHVITQLAHEVAEKHVAIEGDLVVQPSDDHFWFHRPRIVLFLIHFILFQNAFEIGFFFWIWVQYGFDSCIMGQVRYIIPRLIIGVFVQVLCSYSTLPLYAIVTQMGSSFKKAIFDEHVQVGLVGWAQKVKKRKGLRAAADGSSQGGKEGGSTVGIQLGNVMRKASAPSEIKPDDSKSNDLP 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 519452 525292 + CcPI632755_06g000540.1 Cco06g0054 180654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco06g0054 516 MobiDBLite consensus disorder prediction 502 516 - -
Cco06g0054 516 MobiDBLite consensus disorder prediction 497 516 - -
Cco06g0054 516 Pfam Mlo family 8 477 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco06g0054 516 PANTHER MLO-LIKE PROTEIN 1 1 482 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0029 Cco-Chr2:374512 Cco06g0054 Cco-Chr6:519452 5.20E-87 dispersed
Cco06g0054 Cco-Chr6:519452 Cco10g0012 Cco-Chr10:197771 4.80E-95 dispersed
Cco06g0054 Cco-Chr6:519452 Cco02g2253 Cco-Chr2:35108370 1.80E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g0054 K08472 - csv:101211868 993.416