Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g0072 ATGTACACGATGGTGCTCGCGGCGGTGCTGACGGTGGCGGTTTGGGTTTTGAAGAATGCAAACCATTGGGTCTACGAAACCGCTCGGTTGGGTTCGAAACGGTTCGCCCTACCGCCTGGGGATCTTGGCTGGCCGTTCATTGGCAATATGTGGTCTTTTCTAAGAGCTTTCAAGTCCCCTTATCCTGATTCTTTCATGGACTCATTCTTCTCCAGGTATGGAAATACAGGAATGTACAAAGCCTTCATGTTTGGAAGTCCAAGTGTGATAGTAACTTCAGCAGAAGCATGTAAAAGAGTTTTGAATGATGATGAAGCTTTTGGGTCAGGATGGCCTCTTTCCACCATGAAACTCATAGGAGAAAAATCCTTCATTGGCATTTCATACCAAGAACACAAGCGGCTCCGCCGCATAACCGCCGCTCCGGTCAATGGTTACGACGCCTTGGCCGCCTACCTCACTTACATAGAAAAGATTGTGGTTTCTTCCTTAGAGAAATGGGCTTCCATGGGACAAATAGAGTTCTTAACACACCTTAGAAAGCTTACCTTCAAGATCATTATGTACATATTCCTTAGCTCTGAGACTGAGGCAATAATGGAGGCTTTGGAAAGAGAGTACACAGAGCTCAATCATGGAGTCAGAGCTATGGCCATCAATATTCCTGGTTTTGCTTACTATAAAGCACTCAAGGCACGAAAAAATCTCGTGGCAACATTTGGATCAATTGTGAGGGGGAGGAGGAAGGAAAGAGAGAGGAAGAATAATTTGAGAACAAAGAGGAGAGATATGATGGATGCTTTGCTAGATGCAGAAGATGAAGATGGAAGAAGGTTGAGTGATGAAGAAATTATTGATATTTTGATAATGTATTTGAATGCAGGCCATGAATCTTCAGGTCACACTATGATGTGGGCAACCATTTTCTTACAACAACATCCTCAATTTCTTCAAAAGGCCAAGGCAGAGCAAGAAGAGATAGTAAAAAAACGACCTCCCGGGCAAAAAGGTTTAACTCTCAAGGAAGTTCGAGAAATGACCTATCTTTCAAAGGTGATCGATGAAACACTCCGAGTGGTGACATTCTCACTCACTGTCTTTCGAGAGGCAAAGCATGATGTCAAAATTAGTGGCTATACCATTCCAAAAGGTTGGAAAGTTCTAGTTTGGTTTAGAAGTGTTCACCACGATCCCGAAACATATCCGAACCCGAAAGAATTTAATCCTTCAAGATGGGATGATTTCACACCAAAAGCAGGAAGCTTTCTTCCATTTGGAGCAGGAAGTAGATTGTGCCCTGGAAACGATCTTGCAAAACTAGAAATCTCAATCTTTCTCCACTATTTTCTCCTCAGTTATAAGTTGGAAAGGGTTAATCCAAAAAGTCCAGTGAGGTATCTACCACATTCAAGGCCTAAAGATAACTGTTTGGCAAGGATCAAGAGACTTGATTGA 1455 42.82 MYTMVLAAVLTVAVWVLKNANHWVYETARLGSKRFALPPGDLGWPFIGNMWSFLRAFKSPYPDSFMDSFFSRYGNTGMYKAFMFGSPSVIVTSAEACKRVLNDDEAFGSGWPLSTMKLIGEKSFIGISYQEHKRLRRITAAPVNGYDALAAYLTYIEKIVVSSLEKWASMGQIEFLTHLRKLTFKIIMYIFLSSETEAIMEALEREYTELNHGVRAMAINIPGFAYYKALKARKNLVATFGSIVRGRRKERERKNNLRTKRRDMMDALLDAEDEDGRRLSDEEIIDILIMYLNAGHESSGHTMMWATIFLQQHPQFLQKAKAEQEEIVKKRPPGQKGLTLKEVREMTYLSKVIDETLRVVTFSLTVFREAKHDVKISGYTIPKGWKVLVWFRSVHHDPETYPNPKEFNPSRWDDFTPKAGSFLPFGAGSRLCPGNDLAKLEISIFLHYFLLSYKLERVNPKSPVRYLPHSRPKDNCLARIKRLD 484
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 669503 679041 - CcPI632755_06g000720.1 Cco06g0072 180672
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco06g0072 484 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0072 484 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0072 484 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0072 484 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0072 484 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0072 484 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0072 484 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0072 484 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0072 484 Gene3D Cytochrome P450 27 483 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0072 484 Coils Coil 254 274 - -
Cco06g0072 484 SUPERFAMILY Cytochrome P450 32 481 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0072 484 CDD CYP90-like 71 482 - -
Cco06g0072 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco06g0072 484 Pfam Cytochrome P450 38 459 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0072 484 PANTHER CYTOCHROME P450 26 36 458 - GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER)
Cco06g0072 484 FunFam Ent-kaurenoic acid oxidase 28 483 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g0072 Cco-Chr6:669503 Cco09g1260 Cco-Chr9:13411578 5.50E-133 dispersed
Cco05g0314 Cco-Chr5:2493845 Cco06g0072 Cco-Chr6:669503 5.80E-199 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g0072 K04123 - csv:101220640 857.055