Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco06g0072 | ATGTACACGATGGTGCTCGCGGCGGTGCTGACGGTGGCGGTTTGGGTTTTGAAGAATGCAAACCATTGGGTCTACGAAACCGCTCGGTTGGGTTCGAAACGGTTCGCCCTACCGCCTGGGGATCTTGGCTGGCCGTTCATTGGCAATATGTGGTCTTTTCTAAGAGCTTTCAAGTCCCCTTATCCTGATTCTTTCATGGACTCATTCTTCTCCAGGTATGGAAATACAGGAATGTACAAAGCCTTCATGTTTGGAAGTCCAAGTGTGATAGTAACTTCAGCAGAAGCATGTAAAAGAGTTTTGAATGATGATGAAGCTTTTGGGTCAGGATGGCCTCTTTCCACCATGAAACTCATAGGAGAAAAATCCTTCATTGGCATTTCATACCAAGAACACAAGCGGCTCCGCCGCATAACCGCCGCTCCGGTCAATGGTTACGACGCCTTGGCCGCCTACCTCACTTACATAGAAAAGATTGTGGTTTCTTCCTTAGAGAAATGGGCTTCCATGGGACAAATAGAGTTCTTAACACACCTTAGAAAGCTTACCTTCAAGATCATTATGTACATATTCCTTAGCTCTGAGACTGAGGCAATAATGGAGGCTTTGGAAAGAGAGTACACAGAGCTCAATCATGGAGTCAGAGCTATGGCCATCAATATTCCTGGTTTTGCTTACTATAAAGCACTCAAGGCACGAAAAAATCTCGTGGCAACATTTGGATCAATTGTGAGGGGGAGGAGGAAGGAAAGAGAGAGGAAGAATAATTTGAGAACAAAGAGGAGAGATATGATGGATGCTTTGCTAGATGCAGAAGATGAAGATGGAAGAAGGTTGAGTGATGAAGAAATTATTGATATTTTGATAATGTATTTGAATGCAGGCCATGAATCTTCAGGTCACACTATGATGTGGGCAACCATTTTCTTACAACAACATCCTCAATTTCTTCAAAAGGCCAAGGCAGAGCAAGAAGAGATAGTAAAAAAACGACCTCCCGGGCAAAAAGGTTTAACTCTCAAGGAAGTTCGAGAAATGACCTATCTTTCAAAGGTGATCGATGAAACACTCCGAGTGGTGACATTCTCACTCACTGTCTTTCGAGAGGCAAAGCATGATGTCAAAATTAGTGGCTATACCATTCCAAAAGGTTGGAAAGTTCTAGTTTGGTTTAGAAGTGTTCACCACGATCCCGAAACATATCCGAACCCGAAAGAATTTAATCCTTCAAGATGGGATGATTTCACACCAAAAGCAGGAAGCTTTCTTCCATTTGGAGCAGGAAGTAGATTGTGCCCTGGAAACGATCTTGCAAAACTAGAAATCTCAATCTTTCTCCACTATTTTCTCCTCAGTTATAAGTTGGAAAGGGTTAATCCAAAAAGTCCAGTGAGGTATCTACCACATTCAAGGCCTAAAGATAACTGTTTGGCAAGGATCAAGAGACTTGATTGA | 1455 | 42.82 | MYTMVLAAVLTVAVWVLKNANHWVYETARLGSKRFALPPGDLGWPFIGNMWSFLRAFKSPYPDSFMDSFFSRYGNTGMYKAFMFGSPSVIVTSAEACKRVLNDDEAFGSGWPLSTMKLIGEKSFIGISYQEHKRLRRITAAPVNGYDALAAYLTYIEKIVVSSLEKWASMGQIEFLTHLRKLTFKIIMYIFLSSETEAIMEALEREYTELNHGVRAMAINIPGFAYYKALKARKNLVATFGSIVRGRRKERERKNNLRTKRRDMMDALLDAEDEDGRRLSDEEIIDILIMYLNAGHESSGHTMMWATIFLQQHPQFLQKAKAEQEEIVKKRPPGQKGLTLKEVREMTYLSKVIDETLRVVTFSLTVFREAKHDVKISGYTIPKGWKVLVWFRSVHHDPETYPNPKEFNPSRWDDFTPKAGSFLPFGAGSRLCPGNDLAKLEISIFLHYFLLSYKLERVNPKSPVRYLPHSRPKDNCLARIKRLD | 484 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 669503 | 679041 | - | CcPI632755_06g000720.1 | Cco06g0072 | 180672 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco06g0072 | 484 | PRINTS | P450 superfamily signature | 351 | 362 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0072 | 484 | PRINTS | P450 superfamily signature | 294 | 311 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0072 | 484 | PRINTS | P450 superfamily signature | 432 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0072 | 484 | PRINTS | P450 superfamily signature | 423 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0072 | 484 | PRINTS | E-class P450 group I signature | 422 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0072 | 484 | PRINTS | E-class P450 group I signature | 432 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0072 | 484 | PRINTS | E-class P450 group I signature | 303 | 329 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0072 | 484 | PRINTS | E-class P450 group I signature | 390 | 414 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0072 | 484 | Gene3D | Cytochrome P450 | 27 | 483 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0072 | 484 | Coils | Coil | 254 | 274 | - | - | |
| Cco06g0072 | 484 | SUPERFAMILY | Cytochrome P450 | 32 | 481 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0072 | 484 | CDD | CYP90-like | 71 | 482 | - | - | |
| Cco06g0072 | 484 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 425 | 434 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco06g0072 | 484 | Pfam | Cytochrome P450 | 38 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0072 | 484 | PANTHER | CYTOCHROME P450 26 | 36 | 458 | - | GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER) | |
| Cco06g0072 | 484 | FunFam | Ent-kaurenoic acid oxidase | 28 | 483 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco06g0072 | Cco-Chr6:669503 | Cco09g1260 | Cco-Chr9:13411578 | 5.50E-133 | dispersed | |
| Cco05g0314 | Cco-Chr5:2493845 | Cco06g0072 | Cco-Chr6:669503 | 5.80E-199 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco06g0072 | K04123 | - | csv:101220640 | 857.055 |