Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g0102 ATGATGAGAGAGAGAAGAAGTTGTGTTGTTGTATCCCTTGTGGGTATAGCATTATTGATGAGTTTATCGATTGTGAGAGGTGAAAATACATTACAATCACCAGTTAAGCTGGTATGGCATTACTACAAGCTCAACGCAACTTGCCCTTATGCTGAGGAATACATAAAGCATCAAGTCAAGTTGTTTTGGGACAAGGATAAGAGCATTGCTGCCAAGTTCCTTCGTTTGCTCTCTGCAGATTGCCTTTCCAAAAATGGTTGTGACGGTTCAATACTTCTTGATGGTCCAAATTCAGAGAAAAATGCACCACAAAACCAAGGCCTTGGAGGGTTTGAAGAGATTGACAAGATCAAAATTGTACTCGAAGAAAGATGTCCGGGTGTTGTTTCTTGTACAGACATTTTGAACCTAGCCACTAGAGATGCTGCCCATTTGGCAGGTGCACCATCTTATCCAGTTTTTACTGGGAGGAGGGATGGTTTTACAAGCAGTATTGATGCAGTGGATTTACCATCTCCCTCCATAACATGGCAAGAAGGACTTAATTATTTTCAATCTAAAGGTCTTGATGTTTTGGACATGACAACACTCCTAGGTGCACATTCAATGGGAAAAACACACTGTCGATACATCATGGATAGGCTATACAATTTCAAAGGCACAAAAAAACCCGATCCATCAATGGACAAATCATTGTTAAAACAGCTTCAAAAGAAATGCCCCAAAAATTCAAAAACAGACCCAAGAGTGAATCTAACACCAAAATCTGGAAATGACTATCAATTCACAAGTCTTTACTACTCGAGAATTCTTTCGAAAAAGGCGGTCCTCGGTCTCGATCAACAGCTCCTTTTCGGTAACGACACGAATGAAATTGTCCACGAATTTGCTCCAGAATCTGGATTTGAAGACTTTCGTCGGTCCTTTGCTTTGTCTATGAGTAGGATGGGAAATATCAAGGTTTTGACTGGAAAAGATGGCGAGATTCGACGACATTGTCGCCGAAGAAACTAG 1014 40.73 MMRERRSCVVVSLVGIALLMSLSIVRGENTLQSPVKLVWHYYKLNATCPYAEEYIKHQVKLFWDKDKSIAAKFLRLLSADCLSKNGCDGSILLDGPNSEKNAPQNQGLGGFEEIDKIKIVLEERCPGVVSCTDILNLATRDAAHLAGAPSYPVFTGRRDGFTSSIDAVDLPSPSITWQEGLNYFQSKGLDVLDMTTLLGAHSMGKTHCRYIMDRLYNFKGTKKPDPSMDKSLLKQLQKKCPKNSKTDPRVNLTPKSGNDYQFTSLYYSRILSKKAVLGLDQQLLFGNDTNEIVHEFAPESGFEDFRRSFALSMSRMGNIKVLTGKDGEIRRHCRRRN 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 967788 972093 + CcPI632755_06g001020.1 Cco06g0102 180702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco06g0102 337 ProSiteProfiles Plant heme peroxidase family profile. 36 337 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 SUPERFAMILY Heme-dependent peroxidases 43 337 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 Gene3D - 41 337 - -
Cco06g0102 337 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 Pfam Peroxidase 56 297 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco06g0102 337 CDD secretory_peroxidase 36 335 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cco06g0102 337 PANTHER PEROXIDASE 25-RELATED 40 333 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cco06g0102 337 FunFam Peroxidase 171 316 - -
Cco06g0102 337 Gene3D Peroxidase, domain 2 171 316 - -
Cco06g0102 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g0102 Cco-Chr6:967788 Cco09g2469 Cco-Chr9:38879791 2.30E-53 dispersed
Cco06g0102 Cco-Chr6:967788 Cco04g1423 Cco-Chr4:29638604 7.40E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g0102 K00430 - csv:101213667 580.096