Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g0153 ATGGAAGACTCCATCTCACTCTATTCAGCCATTTCAATTCTGAGTATTGCTGTAGTTTTGGCAATCATAAAGTATTTGTTTAAATCCAATTCCTACAAAAATCTTCCTCCAAGTCCACCCTCTATTCCAATTATAGGTCACCTCCATCTCCTTAAGCTCCCAGTTCATAGAAGCCTACAAACTCTCTCACAAAAGCATGGTCCAGTACTATCTCTTCGGTTCGGCTCTCGTTTAGTCGTCATCGTTTCGTCAATGGAAGCTGCAGAAGAATGCTTCACCAAAAATGACATCGTTTTCGCAAACCGTCCTGACTTCGCCGTCAGCCGGTGCTTGAGTTACAACCAAACCACCCTCGGAGCGGCTCCGTACGGTGACCACTGGCGTAAACTTCGGCGTGTGAGTGCGCTCGAAATACTGTCTTCGAATCGGCTTAACGCAAATCACGAGATTCGGAGAGACGAAATGAGAAGAGCAATGAAGAAGATATATGAAATTTCAAGAGATGGTTATGGAAAAGTGGAGTTCAAATCAATGGTGAAGGAATTGACATTGAATATAACAATGAGAATGGTGGCAGGGAAGAGATATTATGGTGAAGAAGCAGCAAAAAGTAGTGAAGCAAGAACATTCCAAGCTATTGTGGATGAGCTTTTTGAATTTACTTTGTCTTCATATCCAGCTGACTTCTTGCCAATTTTGAAGTATATTGATATTCAAGGTTTTATGAAGAGGGCAAAGAAGCTTATCACAAGGGTTGATTCATTTTGGCAAGGACTGATTGATGAACACAGAAGAGGTGAAATCAGTAATGAAGAAATGGAGAATTGTATGGTTGCTCATTTCCTTAAGTTGCAAGAGTCACAGCCTGAGTATTATACAGATGATATTATCAAAGGCTTGATTTTGACAATGATACTCGGTGGGTCAGACACTACTGCGGTGACAATAGAGTGGGCAATGTCAAATCTCCTAAACCATCCATTGGTACTGAAGAAGGCAAGAGCTGAATTAGAGTCTCAACTTGGTGGAGATCGATTGCTTGAAGAATCCGATCTTTCAAAATTAAGTTACCTAAGATGTATAGTCCTAGAAACTCTTCGGTTGTACCCGGCTGGTCCGCTCCTACTGCCACATAAGTCTTCTGCTGACTGTACCGTATCAGGATACGACGTGCCACGTGACACGATCTTATTGGTGAACGCGTGGGCCATCCATAGGGACCCCACATTGTGGGAAGATCCAACAAGTTTTAAACCAGAGAGGTTTGAGAATAGTGGGGAAGGGGATGCAAATAGTAAGTTAATGATAGCATTTGGTTTGGGAAGAAGAGCTTGTCCAGGAACTGGAATGGCACATAGAGTGTTGGGTTTGAGTCTTGGACTGTTGATTCAATGTTTTGATTGGAAGAGTATTGAAGGTAAGGAAATAGATATGACTGAAGGAAAAGGGGTTAGTATGCCTAAAGCTCAACCACTTGAAGCACTATGTAAAGCAAGAGAAATTGCAACCAAGCTGCTTTGA 1521 42.08 MEDSISLYSAISILSIAVVLAIIKYLFKSNSYKNLPPSPPSIPIIGHLHLLKLPVHRSLQTLSQKHGPVLSLRFGSRLVVIVSSMEAAEECFTKNDIVFANRPDFAVSRCLSYNQTTLGAAPYGDHWRKLRRVSALEILSSNRLNANHEIRRDEMRRAMKKIYEISRDGYGKVEFKSMVKELTLNITMRMVAGKRYYGEEAAKSSEARTFQAIVDELFEFTLSSYPADFLPILKYIDIQGFMKRAKKLITRVDSFWQGLIDEHRRGEISNEEMENCMVAHFLKLQESQPEYYTDDIIKGLILTMILGGSDTTAVTIEWAMSNLLNHPLVLKKARAELESQLGGDRLLEESDLSKLSYLRCIVLETLRLYPAGPLLLPHKSSADCTVSGYDVPRDTILLVNAWAIHRDPTLWEDPTSFKPERFENSGEGDANSKLMIAFGLGRRACPGTGMAHRVLGLSLGLLIQCFDWKSIEGKEIDMTEGKGVSMPKAQPLEALCKAREIATKLL 506
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 1569519 1571418 - CcPI632755_06g001530.1 Cco06g0153 180753
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco06g0153 506 Gene3D Cytochrome P450 27 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco06g0153 506 CDD CYP81 67 492 - -
Cco06g0153 506 PANTHER CYTOCHROME P450 82C3-RELATED 20 499 IPR050651 -
Cco06g0153 506 Pfam Cytochrome P450 36 488 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 SUPERFAMILY Cytochrome P450 36 499 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 FunFam Cytochrome P450 family protein 27 502 - -
Cco06g0153 506 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0153 506 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g0153 Cco-Chr6:1569519 Cco06g0155 Cco-Chr6:1584689 4.20E-168 dispersed
Cco06g0153 Cco-Chr6:1569519 Cco06g0154 Cco-Chr6:1574433 1.60E-42 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g0153 K13260 - csv:101208069 879.011