Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g0154 ATGATGGATGGTTGGCTAACAGCGCTCCTTGCCCTTTCAATTTGTGCAGTCTTACACTTAGTTTTGAGCTTTATTTTGCATCGCAAGCAAAATCTCCCACCCGGTCCTCTTGCTTTACCTCTTATAGGCAATCCCATATGGCTTTTCAAGCCTCTTACCCAACTTGAAACCATTCTTCGCCATTACCATTCCAAATACGGCCCTGTTGTTACCCTTTACTTTGGTAACACTCCTTCCATTTTCATAGCTAGCCACTCTGTTTCTCACCATGCTTTGGTTCAAAACGGCGCCGTCTTCGCCGACCGTTTCCCCGTCATGGAAACTGCCAGAATCATCACTAGTAACCAACATAATATCAGCACCGCCTTCTACGGTCCCACATGGCGTATTCTCCGCCGCAACCTCACGTCCGAGCTCCTCCATCCGTCTCGATTGAAAGCTCACTCGCCTACTCGTAAATGGGTGTTGGATGATCTCGTCCATCGCCTCCATCAGGCCCCTGGTCCTGTAAAGCTCCTTGACCATCTTCGTTATGCCATGTTTTGTTTAGCTACAACTATGTGTTTTGGGGAGAGATTTGATGAGAAATTGATTCGTGAAATACAAGAATCTCAACGTGGGGTGTTGTTGAATATCACAAAGTTTAATGATCTTAATTTTTGGCCTCCTAGATTGGGGAAGTTTTTGTTCAAGAAGCGTTGGGAAGAGATTCGTCAACTACGTAAACGTCAAGATGATTGCTTATTACCTTTGATTAACAAAGCAAGACAAAACAGAACAACAATCAAAGATAAAGAAGCTGCAGGGAAGGCAATCCCTTATGTTGATACTCTGTTTGATTTGGAAATTGCTGACAACAATGATGAGAAGGTAAAGAGGAAATTGGTTGATGATGAGCTCATAACATTATGCTCTGAGTTTCTTGACGCCATTACAGATACAACGACCGTGTCGTTGCAATGGATAATGGCGAATTTAGTGAAGCGAACAGAAATTCAAGAGAAAGTGTACAAGGAGATAAAAGAAGCGATGCAAAACAAGGAGAAGAATGAAGAGATAGAAGAGGAAGATTTGGGGAAGATGACATATTTGAAAGCAGTAATAATGGAAGGACTACGGCGACATCCGCCGGGGCATTTTTTGTTGCCTCATCAAGTGATGGAGGATAGTGTTTTGGAAGGAGGATACAAGGTGCCAAAAGGAACATCAGTGAACTTTATGGTAGCAGACATGGGTTGGGACCCGAAAGTATGGCCGGAACCGACGGCGTTTAAGCCGGAGAGATTCTTGAATGATAGGTCAAAGGGAGGGGTTGAATTGGAAGTTGATATCACAGGAAGTAAGGAAATAAAGATGATGCCATTTGGGGCTGGGAGGAGGATATGCCCAGGATTTGCATTGGGGTTATTGCATTTGGAGTATTACATTGGGAATTTGGTGTGGAACTTCGAGTGGAAGGCAGCTGGGGAAGTTGATTTGACTGAGACCCAAGAAAATGCTGTCACCATGAAATATCCCTTGCTTGCTTACTTGTCTCCAAGGCCTGTTTCTTAG 1554 43.95 MMDGWLTALLALSICAVLHLVLSFILHRKQNLPPGPLALPLIGNPIWLFKPLTQLETILRHYHSKYGPVVTLYFGNTPSIFIASHSVSHHALVQNGAVFADRFPVMETARIITSNQHNISTAFYGPTWRILRRNLTSELLHPSRLKAHSPTRKWVLDDLVHRLHQAPGPVKLLDHLRYAMFCLATTMCFGERFDEKLIREIQESQRGVLLNITKFNDLNFWPPRLGKFLFKKRWEEIRQLRKRQDDCLLPLINKARQNRTTIKDKEAAGKAIPYVDTLFDLEIADNNDEKVKRKLVDDELITLCSEFLDAITDTTTVSLQWIMANLVKRTEIQEKVYKEIKEAMQNKEKNEEIEEEDLGKMTYLKAVIMEGLRRHPPGHFLLPHQVMEDSVLEGGYKVPKGTSVNFMVADMGWDPKVWPEPTAFKPERFLNDRSKGGVELEVDITGSKEIKMMPFGAGRRICPGFALGLLHLEYYIGNLVWNFEWKAAGEVDLTETQENAVTMKYPLLAYLSPRPVS 517
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 1574433 1575986 + CcPI632755_06g001540.1 Cco06g0154 180754
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco06g0154 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco06g0154 517 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 CDD CYP77_89 65 507 - -
Cco06g0154 517 Gene3D Cytochrome P450 25 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 SUPERFAMILY Cytochrome P450 31 514 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 Coils Coil 337 357 - -
Cco06g0154 517 Pfam Cytochrome P450 33 503 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0154 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 17 514 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Cco06g0154 517 FunFam Cytochrome P450 family protein 26 516 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0826 Cco-Chr2:9500137 Cco06g0154 Cco-Chr6:1574433 8.20E-119 dispersed
Cco06g0154 Cco-Chr6:1574433 Cco09g1899 Cco-Chr9:32439858 7.90E-154 dispersed
Cco06g0153 Cco-Chr6:1569519 Cco06g0154 Cco-Chr6:1574433 1.60E-42 tandem
Cco06g0154 Cco-Chr6:1574433 Cco06g0155 Cco-Chr6:1584689 1.30E-50 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g0154 K24184 - csv:101204774 850.121