Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco06g0154 | ATGATGGATGGTTGGCTAACAGCGCTCCTTGCCCTTTCAATTTGTGCAGTCTTACACTTAGTTTTGAGCTTTATTTTGCATCGCAAGCAAAATCTCCCACCCGGTCCTCTTGCTTTACCTCTTATAGGCAATCCCATATGGCTTTTCAAGCCTCTTACCCAACTTGAAACCATTCTTCGCCATTACCATTCCAAATACGGCCCTGTTGTTACCCTTTACTTTGGTAACACTCCTTCCATTTTCATAGCTAGCCACTCTGTTTCTCACCATGCTTTGGTTCAAAACGGCGCCGTCTTCGCCGACCGTTTCCCCGTCATGGAAACTGCCAGAATCATCACTAGTAACCAACATAATATCAGCACCGCCTTCTACGGTCCCACATGGCGTATTCTCCGCCGCAACCTCACGTCCGAGCTCCTCCATCCGTCTCGATTGAAAGCTCACTCGCCTACTCGTAAATGGGTGTTGGATGATCTCGTCCATCGCCTCCATCAGGCCCCTGGTCCTGTAAAGCTCCTTGACCATCTTCGTTATGCCATGTTTTGTTTAGCTACAACTATGTGTTTTGGGGAGAGATTTGATGAGAAATTGATTCGTGAAATACAAGAATCTCAACGTGGGGTGTTGTTGAATATCACAAAGTTTAATGATCTTAATTTTTGGCCTCCTAGATTGGGGAAGTTTTTGTTCAAGAAGCGTTGGGAAGAGATTCGTCAACTACGTAAACGTCAAGATGATTGCTTATTACCTTTGATTAACAAAGCAAGACAAAACAGAACAACAATCAAAGATAAAGAAGCTGCAGGGAAGGCAATCCCTTATGTTGATACTCTGTTTGATTTGGAAATTGCTGACAACAATGATGAGAAGGTAAAGAGGAAATTGGTTGATGATGAGCTCATAACATTATGCTCTGAGTTTCTTGACGCCATTACAGATACAACGACCGTGTCGTTGCAATGGATAATGGCGAATTTAGTGAAGCGAACAGAAATTCAAGAGAAAGTGTACAAGGAGATAAAAGAAGCGATGCAAAACAAGGAGAAGAATGAAGAGATAGAAGAGGAAGATTTGGGGAAGATGACATATTTGAAAGCAGTAATAATGGAAGGACTACGGCGACATCCGCCGGGGCATTTTTTGTTGCCTCATCAAGTGATGGAGGATAGTGTTTTGGAAGGAGGATACAAGGTGCCAAAAGGAACATCAGTGAACTTTATGGTAGCAGACATGGGTTGGGACCCGAAAGTATGGCCGGAACCGACGGCGTTTAAGCCGGAGAGATTCTTGAATGATAGGTCAAAGGGAGGGGTTGAATTGGAAGTTGATATCACAGGAAGTAAGGAAATAAAGATGATGCCATTTGGGGCTGGGAGGAGGATATGCCCAGGATTTGCATTGGGGTTATTGCATTTGGAGTATTACATTGGGAATTTGGTGTGGAACTTCGAGTGGAAGGCAGCTGGGGAAGTTGATTTGACTGAGACCCAAGAAAATGCTGTCACCATGAAATATCCCTTGCTTGCTTACTTGTCTCCAAGGCCTGTTTCTTAG | 1554 | 43.95 | MMDGWLTALLALSICAVLHLVLSFILHRKQNLPPGPLALPLIGNPIWLFKPLTQLETILRHYHSKYGPVVTLYFGNTPSIFIASHSVSHHALVQNGAVFADRFPVMETARIITSNQHNISTAFYGPTWRILRRNLTSELLHPSRLKAHSPTRKWVLDDLVHRLHQAPGPVKLLDHLRYAMFCLATTMCFGERFDEKLIREIQESQRGVLLNITKFNDLNFWPPRLGKFLFKKRWEEIRQLRKRQDDCLLPLINKARQNRTTIKDKEAAGKAIPYVDTLFDLEIADNNDEKVKRKLVDDELITLCSEFLDAITDTTTVSLQWIMANLVKRTEIQEKVYKEIKEAMQNKEKNEEIEEEDLGKMTYLKAVIMEGLRRHPPGHFLLPHQVMEDSVLEGGYKVPKGTSVNFMVADMGWDPKVWPEPTAFKPERFLNDRSKGGVELEVDITGSKEIKMMPFGAGRRICPGFALGLLHLEYYIGNLVWNFEWKAAGEVDLTETQENAVTMKYPLLAYLSPRPVS | 517 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 1574433 | 1575986 | + | CcPI632755_06g001540.1 | Cco06g0154 | 180754 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco06g0154 | 517 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 455 | 464 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco06g0154 | 517 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | PRINTS | E-class P450 group I signature | 87 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | PRINTS | E-class P450 group I signature | 452 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | PRINTS | E-class P450 group I signature | 407 | 431 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | PRINTS | E-class P450 group I signature | 462 | 485 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | CDD | CYP77_89 | 65 | 507 | - | - | |
| Cco06g0154 | 517 | Gene3D | Cytochrome P450 | 25 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | SUPERFAMILY | Cytochrome P450 | 31 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | Coils | Coil | 337 | 357 | - | - | |
| Cco06g0154 | 517 | Pfam | Cytochrome P450 | 33 | 503 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | PRINTS | P450 superfamily signature | 453 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | PRINTS | P450 superfamily signature | 462 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0154 | 517 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 17 | 514 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Cco06g0154 | 517 | FunFam | Cytochrome P450 family protein | 26 | 516 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco02g0826 | Cco-Chr2:9500137 | Cco06g0154 | Cco-Chr6:1574433 | 8.20E-119 | dispersed | |
| Cco06g0154 | Cco-Chr6:1574433 | Cco09g1899 | Cco-Chr9:32439858 | 7.90E-154 | dispersed | |
| Cco06g0153 | Cco-Chr6:1569519 | Cco06g0154 | Cco-Chr6:1574433 | 1.60E-42 | tandem | |
| Cco06g0154 | Cco-Chr6:1574433 | Cco06g0155 | Cco-Chr6:1584689 | 1.30E-50 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco06g0154 | K24184 | - | csv:101204774 | 850.121 |