Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco06g0155 | ATGGAGACCACCACCTATTTTCCATTTTTAGTTACATTCTTGGCTTTGCTTTCCATTTTCTTGTTCCAAAAAACAAAAAACAGAACAAAAAAGAATCTCCCTCCCACTCCTCTGGCTCTCCCAATCCTTGGCCATCTTCATCTCCTCAAACACCCAATCCACAGAACTCTCCACTCTCTCGCCCAAAAATACGGCCCAATCTTCACTCTCCGTCTCGGCGCTCGTCTCGTCGTCGTCGTCTCCTCCACATCCGCCGTCGAAGAATGCTTCACAACAAACGACATCGTTTTTGCAAACCGACCCGAATTCGTCTCCGGCAAGTACCTCAGCTACGGTAACAGCACGCTTGGGGCAGCCCCATATGGCGATCATTGGCGCAATTTACGGCGGTTGAGCGCAACGGAAGTCTTGTCGTCGATCCGGTTGAACGTGTCAGCAGGAATCCGAAAGGAAGAGATCGAGATTTTGCTTAGGAAACTGTACAAAGTTTCGAGAACAGAGTTTGGGAAAGTGAAGTTGAAATCATTGTTCTCGGAGTTGACATTCAATATGATAATGAGAATGGTGGCTGGGAAAAGGTATTATGGGGAAGAAGTGAGTGAATTGGAAGAGGCGAAAAAGTTCAGAGAAATAATGGAGAAGTCGTTCCAATTGGGATCATATCCAGGGGATTTCTTGCCATTCTTGAAATGGGTTGATTGGCAATACACAAAAAGAGTGGAAAGTCTTGGAAGAGATACGGATTCGTTCTTGCAAAATTTGGTGGATGAACATCGAAGAAATGAAGAGGAAGGGAAAAAGGGGAATACAATGATTAGCCATCTCCTCTGTTTGCAGAAAACTCAGCCTGACTATTACACTGATGAAATTATTAAAGGCCTCATCGTTACAATTTTGTCAGCAGCAACGGAGACATCGTCAGTGACAATAGAATGGGCAATGTCAAATCTCCTAAACCATCCAGAATCATTAAACAAAGTGAAGAATGAATTGGACACAAAAATAGGGAAAGACCGGATTCTAGATGAGGAAGATATCTCTAATTTACCATATCTTCAAAATGTAATTTCAGAGACACTACGCCTTTATCCAGCAGCTCCACTCTTAGCTCCACATTTATCATCACAAAATTGTTCTTTAGGAGGATACAACATTCCAGCTGACACTATCTTAATGGTCAATGCATGGGCTGTTCAAAGAGATCCCAAAGTTTGGGAAGATCCAACAAGCTTTAAACCTGAGAGGTTTGAAAGTGAAGGAGGAGCTACCAATAATGGTTATAAATTCTTGCCATTTGGATTGGGAAGAAGGGCTTGTCCTGGGATGGGAATGGCTAACCGTGTGGTGGGCTTGACTTTGGGTTCGTTGATTCAGGGGTTTGAGTGGAAGAGAGTGAGTGAAAAGGAGATTGATATGACTGAAGGTCAAGGGATTTCTATGCCTAAAGTTGAGCCATTGGAGGCATTGTGTAGAGCTCGTCCCATCATGAACAAGCTTGCATTAGATTAA | 1509 | 43.34 | METTTYFPFLVTFLALLSIFLFQKTKNRTKKNLPPTPLALPILGHLHLLKHPIHRTLHSLAQKYGPIFTLRLGARLVVVVSSTSAVEECFTTNDIVFANRPEFVSGKYLSYGNSTLGAAPYGDHWRNLRRLSATEVLSSIRLNVSAGIRKEEIEILLRKLYKVSRTEFGKVKLKSLFSELTFNMIMRMVAGKRYYGEEVSELEEAKKFREIMEKSFQLGSYPGDFLPFLKWVDWQYTKRVESLGRDTDSFLQNLVDEHRRNEEEGKKGNTMISHLLCLQKTQPDYYTDEIIKGLIVTILSAATETSSVTIEWAMSNLLNHPESLNKVKNELDTKIGKDRILDEEDISNLPYLQNVISETLRLYPAAPLLAPHLSSQNCSLGGYNIPADTILMVNAWAVQRDPKVWEDPTSFKPERFESEGGATNNGYKFLPFGLGRRACPGMGMANRVVGLTLGSLIQGFEWKRVSEKEIDMTEGQGISMPKVEPLEALCRARPIMNKLALD | 502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 1584689 | 1587187 | - | CcPI632755_06g001550.1 | Cco06g0155 | 180755 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco06g0155 | 502 | PANTHER | CYTOCHROME P450 82C3-RELATED | 12 | 493 | IPR050651 | - | |
| Cco06g0155 | 502 | CDD | CYP81 | 65 | 486 | - | - | |
| Cco06g0155 | 502 | FunFam | Cytochrome P450 family protein | 24 | 496 | - | - | |
| Cco06g0155 | 502 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | PRINTS | E-class P450 group I signature | 353 | 371 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | PRINTS | E-class P450 group I signature | 429 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | PRINTS | E-class P450 group I signature | 439 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 432 | 441 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco06g0155 | 502 | Gene3D | Cytochrome P450 | 19 | 492 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | Pfam | Cytochrome P450 | 34 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | PRINTS | P450 superfamily signature | 430 | 439 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco06g0155 | 502 | SUPERFAMILY | Cytochrome P450 | 34 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco04g1470 | Cco-Chr4:30145027 | Cco06g0155 | Cco-Chr6:1584689 | 3.30E-165 | dispersed | |
| Cco04g1472 | Cco-Chr4:30157823 | Cco06g0155 | Cco-Chr6:1584689 | 3.20E-160 | dispersed | |
| Cco05g2203 | Cco-Chr5:30802713 | Cco06g0155 | Cco-Chr6:1584689 | 3.80E-87 | dispersed | |
| Cco05g2204 | Cco-Chr5:30817859 | Cco06g0155 | Cco-Chr6:1584689 | 3.30E-91 | dispersed | |
| Cco05g2296 | Cco-Chr5:31624290 | Cco06g0155 | Cco-Chr6:1584689 | 5.60E-147 | dispersed | |
| Cco06g0153 | Cco-Chr6:1569519 | Cco06g0155 | Cco-Chr6:1584689 | 4.20E-168 | dispersed | |
| Cco06g0155 | Cco-Chr6:1584689 | Cco08g1815 | Cco-Chr8:29216257 | 8.50E-129 | dispersed | |
| Cco09g1900 | Cco-Chr9:32449273 | Cco06g0155 | Cco-Chr6:1584689 | 1.90E-51 | dispersed | |
| Cco11g1603 | Cco-Chr11:28885043 | Cco06g0155 | Cco-Chr6:1584689 | 7.80E-67 | dispersed | |
| Cco06g0154 | Cco-Chr6:1574433 | Cco06g0155 | Cco-Chr6:1584689 | 1.30E-50 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco06g0155 | K13260 | - | cmo:103498908 | 873.618 |