Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g0155 ATGGAGACCACCACCTATTTTCCATTTTTAGTTACATTCTTGGCTTTGCTTTCCATTTTCTTGTTCCAAAAAACAAAAAACAGAACAAAAAAGAATCTCCCTCCCACTCCTCTGGCTCTCCCAATCCTTGGCCATCTTCATCTCCTCAAACACCCAATCCACAGAACTCTCCACTCTCTCGCCCAAAAATACGGCCCAATCTTCACTCTCCGTCTCGGCGCTCGTCTCGTCGTCGTCGTCTCCTCCACATCCGCCGTCGAAGAATGCTTCACAACAAACGACATCGTTTTTGCAAACCGACCCGAATTCGTCTCCGGCAAGTACCTCAGCTACGGTAACAGCACGCTTGGGGCAGCCCCATATGGCGATCATTGGCGCAATTTACGGCGGTTGAGCGCAACGGAAGTCTTGTCGTCGATCCGGTTGAACGTGTCAGCAGGAATCCGAAAGGAAGAGATCGAGATTTTGCTTAGGAAACTGTACAAAGTTTCGAGAACAGAGTTTGGGAAAGTGAAGTTGAAATCATTGTTCTCGGAGTTGACATTCAATATGATAATGAGAATGGTGGCTGGGAAAAGGTATTATGGGGAAGAAGTGAGTGAATTGGAAGAGGCGAAAAAGTTCAGAGAAATAATGGAGAAGTCGTTCCAATTGGGATCATATCCAGGGGATTTCTTGCCATTCTTGAAATGGGTTGATTGGCAATACACAAAAAGAGTGGAAAGTCTTGGAAGAGATACGGATTCGTTCTTGCAAAATTTGGTGGATGAACATCGAAGAAATGAAGAGGAAGGGAAAAAGGGGAATACAATGATTAGCCATCTCCTCTGTTTGCAGAAAACTCAGCCTGACTATTACACTGATGAAATTATTAAAGGCCTCATCGTTACAATTTTGTCAGCAGCAACGGAGACATCGTCAGTGACAATAGAATGGGCAATGTCAAATCTCCTAAACCATCCAGAATCATTAAACAAAGTGAAGAATGAATTGGACACAAAAATAGGGAAAGACCGGATTCTAGATGAGGAAGATATCTCTAATTTACCATATCTTCAAAATGTAATTTCAGAGACACTACGCCTTTATCCAGCAGCTCCACTCTTAGCTCCACATTTATCATCACAAAATTGTTCTTTAGGAGGATACAACATTCCAGCTGACACTATCTTAATGGTCAATGCATGGGCTGTTCAAAGAGATCCCAAAGTTTGGGAAGATCCAACAAGCTTTAAACCTGAGAGGTTTGAAAGTGAAGGAGGAGCTACCAATAATGGTTATAAATTCTTGCCATTTGGATTGGGAAGAAGGGCTTGTCCTGGGATGGGAATGGCTAACCGTGTGGTGGGCTTGACTTTGGGTTCGTTGATTCAGGGGTTTGAGTGGAAGAGAGTGAGTGAAAAGGAGATTGATATGACTGAAGGTCAAGGGATTTCTATGCCTAAAGTTGAGCCATTGGAGGCATTGTGTAGAGCTCGTCCCATCATGAACAAGCTTGCATTAGATTAA 1509 43.34 METTTYFPFLVTFLALLSIFLFQKTKNRTKKNLPPTPLALPILGHLHLLKHPIHRTLHSLAQKYGPIFTLRLGARLVVVVSSTSAVEECFTTNDIVFANRPEFVSGKYLSYGNSTLGAAPYGDHWRNLRRLSATEVLSSIRLNVSAGIRKEEIEILLRKLYKVSRTEFGKVKLKSLFSELTFNMIMRMVAGKRYYGEEVSELEEAKKFREIMEKSFQLGSYPGDFLPFLKWVDWQYTKRVESLGRDTDSFLQNLVDEHRRNEEEGKKGNTMISHLLCLQKTQPDYYTDEIIKGLIVTILSAATETSSVTIEWAMSNLLNHPESLNKVKNELDTKIGKDRILDEEDISNLPYLQNVISETLRLYPAAPLLAPHLSSQNCSLGGYNIPADTILMVNAWAVQRDPKVWEDPTSFKPERFESEGGATNNGYKFLPFGLGRRACPGMGMANRVVGLTLGSLIQGFEWKRVSEKEIDMTEGQGISMPKVEPLEALCRARPIMNKLALD 502
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 1584689 1587187 - CcPI632755_06g001550.1 Cco06g0155 180755
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco06g0155 502 PANTHER CYTOCHROME P450 82C3-RELATED 12 493 IPR050651 -
Cco06g0155 502 CDD CYP81 65 486 - -
Cco06g0155 502 FunFam Cytochrome P450 family protein 24 496 - -
Cco06g0155 502 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco06g0155 502 Gene3D Cytochrome P450 19 492 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 Pfam Cytochrome P450 34 482 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g0155 502 SUPERFAMILY Cytochrome P450 34 493 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1470 Cco-Chr4:30145027 Cco06g0155 Cco-Chr6:1584689 3.30E-165 dispersed
Cco04g1472 Cco-Chr4:30157823 Cco06g0155 Cco-Chr6:1584689 3.20E-160 dispersed
Cco05g2203 Cco-Chr5:30802713 Cco06g0155 Cco-Chr6:1584689 3.80E-87 dispersed
Cco05g2204 Cco-Chr5:30817859 Cco06g0155 Cco-Chr6:1584689 3.30E-91 dispersed
Cco05g2296 Cco-Chr5:31624290 Cco06g0155 Cco-Chr6:1584689 5.60E-147 dispersed
Cco06g0153 Cco-Chr6:1569519 Cco06g0155 Cco-Chr6:1584689 4.20E-168 dispersed
Cco06g0155 Cco-Chr6:1584689 Cco08g1815 Cco-Chr8:29216257 8.50E-129 dispersed
Cco09g1900 Cco-Chr9:32449273 Cco06g0155 Cco-Chr6:1584689 1.90E-51 dispersed
Cco11g1603 Cco-Chr11:28885043 Cco06g0155 Cco-Chr6:1584689 7.80E-67 dispersed
Cco06g0154 Cco-Chr6:1574433 Cco06g0155 Cco-Chr6:1584689 1.30E-50 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g0155 K13260 - cmo:103498908 873.618