Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g0191 ATGGCCGACGGCAAGTTCGATCTCCCTGACGATCTTCTCTCCTCCCGCCCTTCCGATCACTCCTGGACACCCAAAGCTTCTGGAGGGAATGACGAGGAGAAGGTGCTCTCGGCCTTCCTTGACGAGTCAAAAGACCCAGTGGCTTCAGAGAACAGCATACCTTTGTCCCCTCAATGGCTATATGCCAAACCAAGTGAAACTAAGATGGAAGTGCGTGCTCCAACACCAGTGTCCCTTGCTAACTCAACTGATCTCAATCAGAAAGAGGGTTGGCGCCCTGATGGGTCTGAGGACAAGAAAGATTGGAGGAAGAGTACTTCTGAAAATGAAAGTGGCCGCCGTTGGCGAGAGGAAGAGCGAGAAACTGGCTTACTTGGTGGTCGCCGCAGGAAAACTGAGCGCCGCATTGATAACATGTCAAATAAAGAGGCAATGGAGGGTAGAGTTCTGCCTAATTCGGATAGATGGCATGATGGTCGCACTTCTGGTCATGACGGTCGTACTTCTGGACATGATGGCCGTACTTCTGGGCATGATATTCGTACTTCTAGTCATGATGCACGACGTGACAACAAATGGACGTTGAGATGGGGACCAGATGACAAAGAAAAGGAAGCACGGATGGACAAGCGTTCAGATGCTGATAAGGAAGATGTTCGCAATGACAGTCAATCAGTGAGTGGCAATCGCCCTACTTCTGAGCGTGATTCTGAATCGCGTGATAAATGGAGGCCTCGCCATAGGATGGAAAGCCATTCTGTTGGCTCAACTTCCTCTCGCGCTGCACCTGGTTTTTCACTTGAGAGAGGGCGGGGAGATGTGGGGTCTAATTTAGGATTTACAATTGGAAGAGGAAGGGCAAATACTATTGGGAGATCGTCTACTGGTCTCATTGGAGTTCCACACTTGGATAAGATTGAAAATGTTCCTGGGAAACCAAGATACTCATCTCATGCTTTTTGTTACCCCAGGGGTAAGCTTCTTGACATATATAGGAGGCAGAAATCTAATCCATCCTTCTCAGCTCTGCCTGATGATATGGAAGAATTGCAGCCTGTGACTCAACCTTGTGTTGTAGAACCATTAGCTTTTGTTTCTCCGGATGCTGAAGAGGAGACTACCCTTAGTGACATATGGAAGGGGAAAGTCACCAGTAGCGGGGTTGTTTACAATTCACACAAGAAGGGGAAGCTAGCTGAATGTGTTTTAGGAGATGTAGACTCCATAGATGGATATCAGACTGGGCTGGATTCAACTTTAGAGTCTGAGAATATAGCAGCAACTCCGGTTGAAGATATTGCTAATGTGACTCATGAAGTTACTAATGATGAAGCTTGCCAAGATGCTAGTGACAGGAGCATTTGGAGTCATCCTTCAATGAGAGATGTCCTAGATGGAAAATACGTCAGCCATAAGGAAGATGATAAAAGGTCTAGTGCCATTTCTACGTCAAACTCTGGTGGATTGGCCCACACAGTTTCTACAGTAGCCTCCCAACGTGGGATGGAGATTGGTGGTGGACACCCTGGTACTCAGCTAAATGTTGGTGTCAATGGGCGAGCAGATTCTGATCATAAAAAGCCTCATAACTTTGATGAAAATGAGTTTGCCAATTCGTTTGATGCCAGATCCAAGCTTTCTGATGATCCTAGCTCTATTTTCTTTATTCCCTTCTCTGAGCAAAATCCAAATAAAAGTTCTGATGTGAAATCTGAGGAGATGAGTTTGTTCTATCTTGATCCTCAAGGGGTTATACAGGGGCCTTTTATTGGGGCTGACATCATCTTGTGGTATGAACAAGGTTTCTTTGGGTTGGACCTGCCTGTTCGGTTGGCAGATGCCCCTGAGTCCCCATTTTGTGAGTTGGGGGAGGTTATGCCACATTTGAAAGTTAGAGAGGGAAGTGTTGATTGTGCTGATACGAAATCTCTTTCAGGCCAGTCTGGTGCCTCAGGAGGAATAATGGAGACCAATTTACCTTCTAAGCATCCAGCTCTTGATGCGAATGATGCATCCACAACAAATGAGGTTCATCGGTCACTTGCTGAGTTACATAGCCTCTCCAATCAACACTTTTCATCTGGAATGTCTGAGACTGAAGCACCATTTCAATTGCATTCCAAGGGTCAAAGCTTTCATGATGTTGTTGCTCAGGATGAAGAAATTGTGTTTTCTGGAAGACCTGGAAACGATGGCTACCAATTTCCAAACTCTTCTGGGGTACTGCCTATGGTGAATTCTATCAGCCAACCTTCTCTTTTGAATGAGTTAACTGACCGCAGTGTGCCTGTTCAGAATGAAAATAAGTTGCACCCTTTTGGATTGCTGTGGTCTGAGCTGGAAGGTACAAATATGAAACCAATTGAAGTTACAAATTCGAAACATACCAAGTCAGCTAACATGCCTTCAAGCATGGTAAGAACCGCACCATTAGTTGGGAAGCCGGAAGCATCTCTTAATGCAGAGACTTGGCTTGATGTTTACAGAAGAAGTATGCATTCTGACCAGAGCATATACCAGGATGCGAGTGTTGCTCATTCGTTGCCACATATAGAACAGGAATCTAATAGGTTTGATTTGGCAGATCAACTCATGTCACATCAATATCATCAGGCACTTCAACAGCGGAATTTGTTGTCTCACTCTAATGAAGCTACTTTAGATCATCATATGCACCAGCAGAATCTTATTCACCAGCAGCAGCTGTTGGCTAATAGAAGTACACCGGATCTCGATCATTTCTTGAACTTGCAGATGCAACAGCAACAGCAACGTCAGCTGCAGTTACAGCATCAATTACAACAGCAGCAGTTGCAGCAGCAGCAAAAGCTTTTGCAGGAACAACATCAGTCTCAAGTCCAGCAGGTACTGCTTGAACAGTTGTTGCGTCGACAAATGCATGATTCAGGCCTTGGGCAGACACATATTGATCCAATTAGAGCCAATAATGCTCTTGATCAGGTGATGATGGAGCAGCGTCTTTTACATGAGCTACAGCAACAATCTCATCATCAACAAAGATCTGTTGATCCATCTTTTGAGCAGCTTTTCAAAGCGAAGTTTGGTCACTTGCCACCACACCAAGAACAAAGAGATTTGTCTGAATTAATATCTCGGGCTCAGCATGGACAGATACAATCATTGGATCATCAACTTCTCCAGCAGGAGATGCTACAGTCGAGACAGTTGTCTATGGCATTAAGGCAGAGGGCCAATATAGAGGACAAGAGACATGTTGGTGGTCCTATCTGGCCAGAGGATGAGGCTGATCAGCAGTTTTTCAGAGGACATGCTGGCACACAGCGCTTACCGACTTCAGGGTTTGAATTATACCAGCATCAACAGAGGCAAGCTCATGCAGACCAGCTGAATCACCTTGAGCGGAATATTTCCTTTCAAGATCGGTTTAGACTAGGTCTTTATGAGCCTGCTTCACTTCCACTCGAGAGATCAATATCCTATCCTGATGTTGCTCAGGGGATGAATCTGGATGTTGTTAATGCTATGGCTCGTGCTCGGGCTTTAGAATTGCAAGAATCTAGTGCACATAATCCACCTGGTGGTCAACTGGGGCAATATGCACCCGGTACCATTCCACAGAATCATCATCACTCTCTAGTCGGTAACCAGTTTCACGTTTCACATTTTGATGGAACTGAAGGCAGCTGGTCTGAGAAAAATGAGCGACTTGGAAATGATTGGATGGAGTCTCGCATTCAACAACTGCATATAAATGCTGAGCAACAGAAAAGGGAGTTGGAAGCTAAAATGATTTCCGAGGATCCAACTTTATGGATGTCAGATGGGCTGAATGATGAGAAGTCAAAGCAGTTATTAATGGAACTCCTCAATCAGAAATCTGTTCATCAACCTACAGAATCCTTGGATGTAGGAAGTGGAGCATCTTTCAATAGAGCATCATCTGGCCTCTATTCTGGATCAGGGTCTCTTGAACAGTCGTTCATTCTTCATTCAGGCAAGGAAAGAGGTATGAACAACACATTGCCAGTGGGGTCTTATGGTCCTAATTCTTATGAACCACTGCAAGATGAGCATCCTGGCAGCTTGACCAGCAATGAGAAGGTCCCATACAGGTCGGATTCTGTCTCTGTTGTCAAGGGAGCATCAATTTTGGCTGGTCTTAAAGCCAATGGTGCGGTTAACAGCTCTAGTTCTGGCATGGCTGGCAACCTTTCTATGAATAGAGATGTCTTAGAGGTTGAGGGCAGGGCGCGAGGATTGAAAGGTGAGGGTTTGATGAAAACTCAAGCCTTTCAAATTCAAGAAAGCATGCTTGATCAAGTGGCATCTGCTGATCGTGGGGAATTTTCAATGGATACTCATACCCTTAGTCGGCATTCGTCTCTTGGTTCTGCTGGCTTTCACAATGAAAAGATTGCAAATACGTTTCCTGAAGAGGTTGCTAAAGACCAGGTGACTATTCACAATAAAGATAACACTTTATTGAAACGCCCTCCTGTCTCACGCACTTCGGCATCCCAGGAGGGTTTGTCTGTCCTGATTCCAGATCCGGTTGTCAGAGGGAAGAATTCAGATGGTGGAAGACCGGACCCGAGCGGTATCTTGGTGAACCAAGAAAATATGGCAGCCATGAAGAAAGAGATGCGTTTCCGTCGCTCTTCTTCTTGTAGTGACAGCGATGTGTCAGAGACTTCTTTTATTGATATGCTGAAGAAGACAGCTCCACAAGAAGCCCATTTGACGACGGCAGGAGTTTCGGAGCCATCTGATGGAATGCAGGGAGGGAAAGGTGGGAAGAAGAAAGGGAAGAAGGGGAGACAGATAGATCCCGCTCTACTCGGTTTCAAAGTCACCAGCAACCGAATTATGATGGGTGAAATTCAACGCTTAGATGATTAG 4881 45.42 MADGKFDLPDDLLSSRPSDHSWTPKASGGNDEEKVLSAFLDESKDPVASENSIPLSPQWLYAKPSETKMEVRAPTPVSLANSTDLNQKEGWRPDGSEDKKDWRKSTSENESGRRWREEERETGLLGGRRRKTERRIDNMSNKEAMEGRVLPNSDRWHDGRTSGHDGRTSGHDGRTSGHDIRTSSHDARRDNKWTLRWGPDDKEKEARMDKRSDADKEDVRNDSQSVSGNRPTSERDSESRDKWRPRHRMESHSVGSTSSRAAPGFSLERGRGDVGSNLGFTIGRGRANTIGRSSTGLIGVPHLDKIENVPGKPRYSSHAFCYPRGKLLDIYRRQKSNPSFSALPDDMEELQPVTQPCVVEPLAFVSPDAEEETTLSDIWKGKVTSSGVVYNSHKKGKLAECVLGDVDSIDGYQTGLDSTLESENIAATPVEDIANVTHEVTNDEACQDASDRSIWSHPSMRDVLDGKYVSHKEDDKRSSAISTSNSGGLAHTVSTVASQRGMEIGGGHPGTQLNVGVNGRADSDHKKPHNFDENEFANSFDARSKLSDDPSSIFFIPFSEQNPNKSSDVKSEEMSLFYLDPQGVIQGPFIGADIILWYEQGFFGLDLPVRLADAPESPFCELGEVMPHLKVREGSVDCADTKSLSGQSGASGGIMETNLPSKHPALDANDASTTNEVHRSLAELHSLSNQHFSSGMSETEAPFQLHSKGQSFHDVVAQDEEIVFSGRPGNDGYQFPNSSGVLPMVNSISQPSLLNELTDRSVPVQNENKLHPFGLLWSELEGTNMKPIEVTNSKHTKSANMPSSMVRTAPLVGKPEASLNAETWLDVYRRSMHSDQSIYQDASVAHSLPHIEQESNRFDLADQLMSHQYHQALQQRNLLSHSNEATLDHHMHQQNLIHQQQLLANRSTPDLDHFLNLQMQQQQQRQLQLQHQLQQQQLQQQQKLLQEQHQSQVQQVLLEQLLRRQMHDSGLGQTHIDPIRANNALDQVMMEQRLLHELQQQSHHQQRSVDPSFEQLFKAKFGHLPPHQEQRDLSELISRAQHGQIQSLDHQLLQQEMLQSRQLSMALRQRANIEDKRHVGGPIWPEDEADQQFFRGHAGTQRLPTSGFELYQHQQRQAHADQLNHLERNISFQDRFRLGLYEPASLPLERSISYPDVAQGMNLDVVNAMARARALELQESSAHNPPGGQLGQYAPGTIPQNHHHSLVGNQFHVSHFDGTEGSWSEKNERLGNDWMESRIQQLHINAEQQKRELEAKMISEDPTLWMSDGLNDEKSKQLLMELLNQKSVHQPTESLDVGSGASFNRASSGLYSGSGSLEQSFILHSGKERGMNNTLPVGSYGPNSYEPLQDEHPGSLTSNEKVPYRSDSVSVVKGASILAGLKANGAVNSSSSGMAGNLSMNRDVLEVEGRARGLKGEGLMKTQAFQIQESMLDQVASADRGEFSMDTHTLSRHSSLGSAGFHNEKIANTFPEEVAKDQVTIHNKDNTLLKRPPVSRTSASQEGLSVLIPDPVVRGKNSDGGRPDPSGILVNQENMAAMKKEMRFRRSSSCSDSDVSETSFIDMLKKTAPQEAHLTTAGVSEPSDGMQGGKGGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRLDD 1626
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2001097 2009711 + CcPI632755_06g001910.1 Cco06g0191 180791

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cco06g0191 1626 MobiDBLite consensus disorder prediction 1181 1202 - -
Cco06g0191 1626 Gene3D - 560 643 IPR035445 -
Cco06g0191 1626 MobiDBLite consensus disorder prediction 1339 1361 - -
Cco06g0191 1626 CDD GYF 573 630 IPR003169 GO:0005515(InterPro)
Cco06g0191 1626 MobiDBLite consensus disorder prediction 1510 1529 - -
Cco06g0191 1626 SUPERFAMILY GYF domain 569 629 IPR035445 -
Cco06g0191 1626 Coils Coil 917 939 - -
Cco06g0191 1626 ProSiteProfiles GYF domain profile. 573 623 IPR003169 GO:0005515(InterPro)
Cco06g0191 1626 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1626 - -
Cco06g0191 1626 SMART gyf_5 574 628 IPR003169 GO:0005515(InterPro)
Cco06g0191 1626 MobiDBLite consensus disorder prediction 1 271 - -
Cco06g0191 1626 Coils Coil 981 1001 - -
Cco06g0191 1626 MobiDBLite consensus disorder prediction 90 223 - -
Cco06g0191 1626 Pfam GYF domain 577 614 IPR003169 GO:0005515(InterPro)
Cco06g0191 1626 Coils Coil 1232 1256 - -
Cco06g0191 1626 MobiDBLite consensus disorder prediction 501 532 - -
Cco06g0191 1626 MobiDBLite consensus disorder prediction 1575 1601 - -
Cco06g0191 1626 MobiDBLite consensus disorder prediction 233 253 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g0191 K18730 - - csv:101204211 2764.18
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g0191 Cco-Chr6:2001097 Cco08g1700 Cco-Chr8:28376703 7.20E-28 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1304 . . . . Bpe13g00818 . . . . . . . . . . . . . . . . . . . Cla06g00177 Cam06g0034 Cec06g0196 Cco06g0191 Clacu06g0193 Cmu06g0187 Cre06g0959 . . . . . . . . Blo02g00198 . . . Bpe14g00803 . . . . . . . . . . . . Bhi12g02418 . . . Hepe03g1143 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003820 2 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 2 44