Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g0369 ATGTCTAAAGAAGAAGATCCAAAAGCTAACAGAAGGACAACCCGGTCCTCTTCAGCAGCTGTTCTAAGGGATTCTGGTGAAATAAAGAAGAAACGTGATCCACATATTCCAACTCTTAATGATCTTGTTTTCGGAGAAGATACCATTAGTAAGGAAGATCTCCTGTCTAGTTTTCCTGGACGTCATACTCAAATTCTTGAACTCCTTAACCTTTTAGGTCCCCTGAATTCTCCCATGCTTCCCCTCTTTGTTTATGGTGGCATGTCGGCGGGAAAAACCAGTGTCATTCTACAAATATTTCGTCATCTCAACCGTCCTTTTGTCTACTCAAGCTGTCGTACTTGTTATAGTTTGCGAACTCTGTTTGAGTGTATCTTGAATCAGTTATTACTTCATCAGAAAGATGCAGATAATGGATATTTGAGTGCAAAACGCTGTGAAAAACCATCAGACTTTGTTAACTTTCTTCGTGAAGCCTTAGTTAAAGTTGTAAAAACACTCCAGGGGAACCCAGGAAAGTTAGGCACCAAGAAGTTGACAGGACAAGAGCATGGGCATATGATCTACCTGATTTTTGACAACTTGGAACTTGTTAGAGACTGGGACAAGAGTTCAAGCATATTGCCTTTTCTATTTAATCTCCATGAAGTTTTAAACATGAATGAGGTTGGATTTCTCTTCATCAGTAATACTTCTCCAGATGCATACTATTCAAATATGGGTTACTTGGAGCCCATCCCTGTTTATTTCTCTGAGTACACAGAAGATGATCTTCGTAAAATTTTTATGAGGAATCAAACCAATCAAGAGATGTATTCTTCCTTTCTGAGAATTGTATTGGGGCCATTCTATAGAATTACTAGACAAGTGAATGAGCTATCCTTAACGTTTTCATCATTGTACAAAACATACTGTGAAGCTTCAGATGATCTGAACAATGTTCCCAACGAGTCTAGCAAGAGGACACGTTTCAGTCATTTTCAGCCACATATTGCCCCTGCTTTGAATCAGATATTTAAAATTTCATCTCCACTTTCCGAGGTTAATAATTTGAAGGAAGCAAAGAGAAAATATGGTAGTATGAAGTTTAGCGGGTGCGACTCTTCTGAGCACTTGGATTTTCACATGTCTACTTCAGCAAAATATCTTCTTCTTTCAGCCTTCCTTGCTTCAAGAAACCCAGCTACACTTGATGCATCACTGTTTGATTCAACTGGGGGCACTAGTAGCCGAAAAAAGAGGAAGAGGCCATCGGAAAAATCAATTGAGCAGAAGGAAATTTCAGAACAGGAGTTGCTTATGAAAGGACCTGGAACTTTTCCATTGGAGAGATTGCTTGCAATATTTCAGTGCATTACGTCTGTGGCAGAAATCTCCCTTGAAGATGAGCAAGGAAATGTTTTAATGGAAAGTCAAAATGAGGATAGTGAACTCATGTCTGATGTTCTCCTGCAACTTTCCAGCCTCTGCAATGCAAACTTTGTGGTTAAAGGAGGAAGTTGCCCACTAGAAGGTTCAACTCGATATCGCTCTACAGTGTCTGAAGATATGGCTTTGAAGGTGGCAAGGAATTCTCAGGTGCCAAGAGCATCAACGACTTATTTGCTGGACTCGATAGCACAGCAGTGGCTCAATGATGAGCTTGAGAGAAGAAATGGACTGGATCTTATACACGAAGAAGAAAAATACAGAAAATTATTGATGATGGTTAGTTACCAGCTATTGCTGTATGGCTTCAAAAACAGCAGAGATAAGAAAAGGAAAACTGTGGATTATTTTAGCAATGTCTTAGGTCACCTATTCTATTCCTTTGGCTCTCAAAACCGTCGGCAGTAG 1836 39.71 MSKEEDPKANRRTTRSSSAAVLRDSGEIKKKRDPHIPTLNDLVFGEDTISKEDLLSSFPGRHTQILELLNLLGPLNSPMLPLFVYGGMSAGKTSVILQIFRHLNRPFVYSSCRTCYSLRTLFECILNQLLLHQKDADNGYLSAKRCEKPSDFVNFLREALVKVVKTLQGNPGKLGTKKLTGQEHGHMIYLIFDNLELVRDWDKSSSILPFLFNLHEVLNMNEVGFLFISNTSPDAYYSNMGYLEPIPVYFSEYTEDDLRKIFMRNQTNQEMYSSFLRIVLGPFYRITRQVNELSLTFSSLYKTYCEASDDLNNVPNESSKRTRFSHFQPHIAPALNQIFKISSPLSEVNNLKEAKRKYGSMKFSGCDSSEHLDFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGTSSRKKRKRPSEKSIEQKEISEQELLMKGPGTFPLERLLAIFQCITSVAEISLEDEQGNVLMESQNEDSELMSDVLLQLSSLCNANFVVKGGSCPLEGSTRYRSTVSEDMALKVARNSQVPRASTTYLLDSIAQQWLNDELERRNGLDLIHEEEKYRKLLMMVSYQLLLYGFKNSRDKKRKTVDYFSNVLGHLFYSFGSQNRRQ 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4119148 4126666 + CcPI632755_06g003690.1 Cco06g0369 180969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco06g0369 611 Gene3D - 58 237 IPR027417 -
Cco06g0369 611 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 376 528 IPR047088 -
Cco06g0369 611 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 50 529 IPR020796 GO:0000808(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Cco06g0369 611 MobiDBLite consensus disorder prediction 400 424 - -
Cco06g0369 611 MobiDBLite consensus disorder prediction 1 33 - -
Cco06g0369 611 Pfam AAA ATPase domain 58 217 IPR041664 -
Cco06g0369 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 265 IPR027417 -
Cco06g0369 611 FunFam Origin of replication complex subunit 5 58 239 - -
Cco06g0369 611 MobiDBLite consensus disorder prediction 408 424 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g0369 K02607 - csv:101223023 934.865