Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g0595 ATGAAGTTGGATTCCAATCTCATAAAGTCTGATTCTGAATCGATCAAATTCCACAAGAAACTCGAAAATTTTCCTGGGGTAGGAAAAGAACGAACTTATAGAACTTGGATTCTTCGGTTTTATACTATGGAAATGGATCGTGATGATTTGAGTGTTCGATTATCTGCTCTCGGGAACATCATTGGTCTAAAGAGAAGCCTTAAAGAGGACAGAATTCCTTGCCAAATTGAAGAGGGTCTGTTCTTAGGCTCTGTTGGAGCTGCCCATAACAAAGATCAATTGAAGAAATTGAATATCACTCACATTTTAACCATTGCTTGTTCTTTGCCACCTGCTGATCCAAATGATTTTGTATGTAAAGTAGTTGGTGTCTTGGACACTAGAGATGCAGATATTAAACAACACTTTGATGATTGTTTCAATTTTATCGATGAGGGAAGACAATCTGGTGGAGGGGTCTTGATTCATTGCTTTGCTGGAATATCCAGAAGTGTAACCATTACAGTTGCCTATCTGATGAAAAAGCGTGGTATGAATCTAACTCAAGCATTGGAACACGTCAAGAGTAGACGACGGCAGGCAGCTCCAAATGTTGGTTTCATGGTTCAACTCAAGGACTTTGAAACAGCTCTTCAAGCTAGCAGATGA 648 39.35 MKLDSNLIKSDSESIKFHKKLENFPGVGKERTYRTWILRFYTMEMDRDDLSVRLSALGNIIGLKRSLKEDRIPCQIEEGLFLGSVGAAHNKDQLKKLNITHILTIACSLPPADPNDFVCKVVGVLDTRDADIKQHFDDCFNFIDEGRQSGGGVLIHCFAGISRSVTITVAYLMKKRGMNLTQALEHVKSRRRQAAPNVGFMVQLKDFETALQASR 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6458110 6461892 - CcPI632755_06g005950.1 Cco06g0595 181195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco06g0595 215 Gene3D Protein tyrosine phosphatase superfamily 66 215 IPR029021 -
Cco06g0595 215 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 134 191 IPR000387 GO:0016311(InterPro)
Cco06g0595 215 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 56 210 - GO:0004721(PANTHER)|GO:0008330(PANTHER)|GO:0017017(PANTHER)|GO:0033550(PANTHER)|GO:0043409(PANTHER)
Cco06g0595 215 CDD DSP 73 206 - -
Cco06g0595 215 FunFam Dual specificity phosphatase 12 74 214 - -
Cco06g0595 215 Pfam Dual specificity phosphatase, catalytic domain 80 209 IPR000340 GO:0016311(InterPro)
Cco06g0595 215 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 73 212 IPR029021 -
Cco06g0595 215 SMART dsp_5 72 210 IPR020422 GO:0006470(InterPro)
Cco06g0595 215 ProSiteProfiles Dual specificity protein phosphatase domain profile. 72 213 IPR020422 GO:0006470(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g0595 Cco-Chr6:6458110 Cco10g1348 Cco-Chr10:26512778 5.10E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g0595 - - - 0.0