Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco06g0595 | ATGAAGTTGGATTCCAATCTCATAAAGTCTGATTCTGAATCGATCAAATTCCACAAGAAACTCGAAAATTTTCCTGGGGTAGGAAAAGAACGAACTTATAGAACTTGGATTCTTCGGTTTTATACTATGGAAATGGATCGTGATGATTTGAGTGTTCGATTATCTGCTCTCGGGAACATCATTGGTCTAAAGAGAAGCCTTAAAGAGGACAGAATTCCTTGCCAAATTGAAGAGGGTCTGTTCTTAGGCTCTGTTGGAGCTGCCCATAACAAAGATCAATTGAAGAAATTGAATATCACTCACATTTTAACCATTGCTTGTTCTTTGCCACCTGCTGATCCAAATGATTTTGTATGTAAAGTAGTTGGTGTCTTGGACACTAGAGATGCAGATATTAAACAACACTTTGATGATTGTTTCAATTTTATCGATGAGGGAAGACAATCTGGTGGAGGGGTCTTGATTCATTGCTTTGCTGGAATATCCAGAAGTGTAACCATTACAGTTGCCTATCTGATGAAAAAGCGTGGTATGAATCTAACTCAAGCATTGGAACACGTCAAGAGTAGACGACGGCAGGCAGCTCCAAATGTTGGTTTCATGGTTCAACTCAAGGACTTTGAAACAGCTCTTCAAGCTAGCAGATGA | 648 | 39.35 | MKLDSNLIKSDSESIKFHKKLENFPGVGKERTYRTWILRFYTMEMDRDDLSVRLSALGNIIGLKRSLKEDRIPCQIEEGLFLGSVGAAHNKDQLKKLNITHILTIACSLPPADPNDFVCKVVGVLDTRDADIKQHFDDCFNFIDEGRQSGGGVLIHCFAGISRSVTITVAYLMKKRGMNLTQALEHVKSRRRQAAPNVGFMVQLKDFETALQASR | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6458110 | 6461892 | - | CcPI632755_06g005950.1 | Cco06g0595 | 181195 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco06g0595 | 215 | Gene3D | Protein tyrosine phosphatase superfamily | 66 | 215 | IPR029021 | - | |
Cco06g0595 | 215 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 134 | 191 | IPR000387 | GO:0016311(InterPro) | |
Cco06g0595 | 215 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE | 56 | 210 | - | GO:0004721(PANTHER)|GO:0008330(PANTHER)|GO:0017017(PANTHER)|GO:0033550(PANTHER)|GO:0043409(PANTHER) | |
Cco06g0595 | 215 | CDD | DSP | 73 | 206 | - | - | |
Cco06g0595 | 215 | FunFam | Dual specificity phosphatase 12 | 74 | 214 | - | - | |
Cco06g0595 | 215 | Pfam | Dual specificity phosphatase, catalytic domain | 80 | 209 | IPR000340 | GO:0016311(InterPro) | |
Cco06g0595 | 215 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 73 | 212 | IPR029021 | - | |
Cco06g0595 | 215 | SMART | dsp_5 | 72 | 210 | IPR020422 | GO:0006470(InterPro) | |
Cco06g0595 | 215 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 72 | 213 | IPR020422 | GO:0006470(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco06g0595 | Cco-Chr6:6458110 | Cco10g1348 | Cco-Chr10:26512778 | 5.10E-14 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco06g0595 | - | - | - | 0.0 |