Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco06g0761 | ATGGCCGGTGAGGTAGCGGTGGAGGGTGCTGTGGCGGCAGCCGCGGTGGCGCCAGAACTAGCCGATTCCAGTCAGCAGTCCCATAAATTGGAGAGAAAATGGACCTTTTGGTTTGATAACCAGTCCAGGCCGAAGCAAGGTGCTGCTTGGGGCACTTCTCTCCGCAAGGTTTATACCTTTGACACCGTCGAAGAATTCTGGTGTTTGTACGATCAGCTATTCAAGCCGAGCAAGTTGCCGGCTAATGCAGATTTTCACCTGTTCAAATCTGGAGTTGAACCGAAATGGGAAGATCCTGAGTGCGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGGCTAACCTCGACAACATGTGGTTGGAAACGTTGATGGCTTTGATTGGGGAACAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGTCAGAGGCAGGACAAACTTGCCCTGTGGACCAAGACAGCAACAAATGAGGCTGCTCAGATGAGCATTGGTAGAAAATGGAAGGACATTATTGACGTGACCGACAAGATTTCCTTCAGCTTTCATGAGGACTTGAGAAGGGAGAAGTCAGCAAAAGCTCGATACAGTGTTTGA | 612 | 49.67 | MAGEVAVEGAVAAAAVAPELADSSQQSHKLERKWTFWFDNQSRPKQGAAWGTSLRKVYTFDTVEEFWCLYDQLFKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVTSSRKANLDNMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKDIIDVTDKISFSFHEDLRREKSAKARYSV | 203 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 8741529 | 8743783 | - | CcPI632755_06g007610.1 | Cco06g0761 | 181361 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco06g0761 | 203 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 84 | 107 | IPR019770 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro) | |
Cco06g0761 | 203 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 21 | 195 | IPR001040 | GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER) | |
Cco06g0761 | 203 | FunFam | Eukaryotic translation initiation factor 4E | 19 | 203 | - | - | |
Cco06g0761 | 203 | Pfam | Eukaryotic initiation factor 4E | 29 | 185 | IPR001040 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cco06g0761 | 203 | SUPERFAMILY | eIF4e-like | 22 | 196 | IPR023398 | - | |
Cco06g0761 | 203 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 19 | 203 | IPR023398 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco03g0726 | Cco-Chr3:7477339 | Cco06g0761 | Cco-Chr6:8741529 | 6.10E-59 | dispersed | |
Cco06g0761 | Cco-Chr6:8741529 | Cco10g1328 | Cco-Chr10:26223206 | 4.20E-26 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco06g0761 | K03259 | - | csv:101208495 | 383.259 |