Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g0811 ATGGGTGGCGACGGAAAGCTCTTTACATTGGCTGAAGTCTCTCAGCACAATAACCGCAAAGACTGTTGGTTGATCATTAATGCCAAGGTTTACAATGTAACCGAGTTCTTGGAAGACCATCCCGGTGGCGACGAGGTGTTGTTGTCTGGCACAGGTAAGGATGCAACTGATGATTTTGAAGATGTGGGTCATAGTGAGAGTGCAAGAGAAATGATGAGCAAATACTACATTGGAGAGATGGACGTGTCGACGATCGCGGAACGGTCGGCATACACAACTCCAAAGCAGCCTCATTACAATGAGGATAAGACGACCGAGTTCATCATCAAGCTCCTCCAGTTCTTGGTTCCTCTCGCAATCTTGGGTTTGGCAGTGGGTATCCGCTTTTACACCAAATCAACCTGA 405 47.41 MGGDGKLFTLAEVSQHNNRKDCWLIINAKVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAERSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRFYTKST 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9552183 9555853 + CcPI632755_06g008110.1 Cco06g0811 181411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco06g0811 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 86 IPR036400 -
Cco06g0811 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cco06g0811 134 FunFam Cytochrome b5 type B 3 85 - -
Cco06g0811 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cco06g0811 134 Gene3D - 3 84 IPR036400 -
Cco06g0811 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cco06g0811 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cco06g0811 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cco06g0811 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cco06g0811 134 PANTHER CYTOCHROME B5 6 127 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cco06g0811 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cco06g0811 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g0283 Cco-Chr6:3099359 Cco06g0811 Cco-Chr6:9552183 1.70E-28 dispersed
Cco06g0340 Cco-Chr6:3810311 Cco06g0811 Cco-Chr6:9552183 1.40E-08 dispersed
Cco06g0811 Cco-Chr6:9552183 Cco08g1201 Cco-Chr8:23729642 2.30E-25 dispersed
Cco05g0387 Cco-Chr5:3164184 Cco06g0811 Cco-Chr6:9552183 1.00E-57 wgd
Cco06g0811 Cco-Chr6:9552183 Cco07g0190 Cco-Chr7:2006895 4.00E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g0811 K23490 - csv:101213506 249.98