Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g0956 ATGATCGCTTCTTCGATTTCTTCTTCCTCTATCTCTTTTATCGTCATCTTTGTCCCCATCTTTATCTCCATCTCTTTTTTCCAATTTAAACCCTCTTCCGATCACACCGTATTCCAAACCCTAACTCGAAACTACTCACCCGTCGATCCATCTCCGTCCAAGAACCTCACTGACGGGAACCCGGTCTTGCGGAAGAACTACATTGTTCGCTTCGTCCAATACAGGGAGGCGAAGGAGCATCGGCTCTATCTGGAATCGCGTATTAGATCGGGCGGCTGGGAATGGATCGAGAGGCGGAACCCTGCGTCCAAGTTTCCGACCGATTTCGGCTTGGTGTCAATTGAGGACTTGGTGAGAGGAGAGCTGATTGAGGAGATTGAGGAATTGGAGCTTGTGAAGGATGTGAATGTAGATGCAAGTCATGTCAGGGGTTTGTTAACCGAGGATGGGGGTAGAGTTGGGGCTTTTGTCGACGGGAAGAAGCGTCCGGGGAAGATTTTCACTTCCATGTCATTTAAAGAAGCAGGTGGGGAACGTTATACGGCAATTAGCAATGCCTCTAATAGATGGGGACGGCATCTGTCGATGGAGAGATCCCAAGTTACCTCACTATTTGGAGCAGACTCTCTTTGGGCAAAAGGGTATACGGGTTCCAAAGTCAAGATGGCTATATTCGATACTGGCATTCGTGCTAATCACCCACATTTTAGGAATATCAAGGAGCGAACAAATTGGACCAATGAAGATACTTTAAATGATAATCTTGGACATGGGACATTTGTTGCTGGTGTCATTGCAGGTGGAGATGAAGAATGTCTAGGCTTTGCTCCAGATACGGAGATATATGCTTTTCGTGTGTTTACAGATGCACAGGTGTCATACACTTCATGGTTCCTTGATGCATTCAACTATGCAATTGCTACCAATATGGATGTATTAAATTTAAGCATCGGTGGGCCAGATTACTTGGATCTTCCATTTGTGGAGAAGATTTGGGAAATAACAGCAAATAATATCATCATGGTTTCTGCAATTGGAAACGATGGACCGCTTTATGGGACTTTAAACAATCCTGCAGATCAGAGTGACGTCATTGGCGTTGGTGGTATTGACTACAATGATCATATTGCTTCATTTTCCTCACGTGGCATGACTACTTGGGAGATGCCTCATGGTTATGGTCGTGTGAAGCCAGATGTTGTTGCATATGGTCGGGAAATTATGGGATCCAAAATTAGTACTGGGTGCAAAAGTTTATCAGGCACTAGTGTGGCGAGTCCTGTGGTTGCTGGTGTGGTATGTCTACTTGTTAGTGTAATCCCTGAAAGCCAGCGGAAGGTTATTTTAAATCCAGCTAGCATGAAACAAGCACTTGTTGAGGGAGCTGCAAAGCTTGGTGGTCCTAATATGTATGAGCAAGGCGCTGGCAGAGTTGATCTGTTAGAATCGTATGAAATACTTAAGAGCTACCAACCCCGGGCGAGCATCTTCCCCACTGTTCTTGACTATACAGATTGCCCTTATATGTGGCCCTTTTGTCGCCAACCTCTTTATGCAGGTGCAATGCCTACTATTTTCAATGCCACCATTTTGAATGGGATGGGTGTAATTGGCTATGTTGAAGGTCAACCCACTTGGCATCCTTTGGATGAAGAAGGAAATCTCTTGAGTATTCACTTCACTTATTCTAAGGTCATTTGGCCTTGGACTGGTTACATTGCACTTCATATGCAAATTAAGGAAGAAGGTGCACAATTTTCTGGAGAAATTGAGGGCAATGTGACTCTAACAGTATATAGTCCTCCATCGAGAGGAGAGAAGAACCGCCGGATTAGTACTTGTGTGCTACAGCTGAAGTTAAAAGTAGTTCCCACACCTCCAAGATCAAAACGAATTTTATGGGATCAGTTTCATAATATCAAATATCCTCCTGGTTATATTCCTAGAGATTCCTTGGATGTACGCAATGACATTCTGGACTGGCATGGAGACCACCTGCATACAAATTTTCATATCATGTTTAACATGTTAAGAGATGCTGGGTACTATGTTGAAACACTTGGTTCTCCTCTTACATGCTTTGATGCTCGCCAATATGGGACACTTCTACTAGTGGATCTTGAAGACGAGTACTTCAAAGAGGAAATTGAAAAGTTGAGGGACGATGTTATGATTACTGGATTGGGATTGGCTGTGTTTTCTGAATGGTATAATGTAGAAACAATGGTAAAGATGAGGTTTTTTGATGATAACACAAGAAGCTGGTGGACACCAGTTACTGGAGGTGCAAATATTCCTGCACTCAATGATCTTTTAGCCCCATTTGGTATTGCTTTCGGGGATAAGATTTTGAATGGTGATTTTTCTATTGATGGTGAACAGAGTCGGTATGCGTCAGGAACAGATATTGTGAGGTTTCCACAAGGTGGTTATGTGCATAGTTTCCCCTTCGTTGATAGCTCAGAGAGTGGGGCGGCTCAGAGCATACTAACATCTAGCATGAGTAAGGCAGACTTTCCGATTCTTGGCCTATTAGAGGCAGGAGAAGGCCGCATTGCAGTCTATGGAGATTCAAATTGTCTGGATAGCAGTCATATGGTTACAAACTGCTATTGGCTGCTGAGAAAAATATTAGATTTTACCAGTGGAAATATTAGAGATCCGGTTCTATTCACTAAGTTTTCGAAACAAAATTCACCTCTGTATCTAGAAGATAACAAACTACCATCTCGAAGAAGTGATGTAAACTTCTCTTTGTATTCTGCTGTTGCTGGAAAGGAATTGATATGCAGGAGTGATTCTAGGTTTGAAGTATGGGGAACCAAGGGATACAGTATACAGGTCAGGGGAAGAAATCGAAGGCTGCCTGGATTTCCCGTAATAGACTTGGGAAGAGGCTTGAATTCTACTCCTGAGAGTTCTTCGACGGGACCTCCAAAGTTGACGTTAAAAAACCGAAGAGATACATATGGAAACCGATACTTAAGCTTGTTCTACCGAGATGAGCCTGACATGCCTTTGATTGTTCCTGATCATTGGCTTGTTCCTGCTGTAGTTGCATTAACAGGGCTTTTGCTCCTTTTGAGTTTTTGGCGGATTAGACAGAAGCGGCGACGACGACGCAGAGGATCTGGATCTGCACGTTTTTCGAATATATAG 3159 43.4 MIASSISSSSISFIVIFVPIFISISFFQFKPSSDHTVFQTLTRNYSPVDPSPSKNLTDGNPVLRKNYIVRFVQYREAKEHRLYLESRIRSGGWEWIERRNPASKFPTDFGLVSIEDLVRGELIEEIEELELVKDVNVDASHVRGLLTEDGGRVGAFVDGKKRPGKIFTSMSFKEAGGERYTAISNASNRWGRHLSMERSQVTSLFGADSLWAKGYTGSKVKMAIFDTGIRANHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGGDEECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMTTWEMPHGYGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPESQRKVILNPASMKQALVEGAAKLGGPNMYEQGAGRVDLLESYEILKSYQPRASIFPTVLDYTDCPYMWPFCRQPLYAGAMPTIFNATILNGMGVIGYVEGQPTWHPLDEEGNLLSIHFTYSKVIWPWTGYIALHMQIKEEGAQFSGEIEGNVTLTVYSPPSRGEKNRRISTCVLQLKLKVVPTPPRSKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPLTCFDARQYGTLLLVDLEDEYFKEEIEKLRDDVMITGLGLAVFSEWYNVETMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSIDGEQSRYASGTDIVRFPQGGYVHSFPFVDSSESGAAQSILTSSMSKADFPILGLLEAGEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSGNIRDPVLFTKFSKQNSPLYLEDNKLPSRRSDVNFSLYSAVAGKELICRSDSRFEVWGTKGYSIQVRGRNRRLPGFPVIDLGRGLNSTPESSSTGPPKLTLKNRRDTYGNRYLSLFYRDEPDMPLIVPDHWLVPAVVALTGLLLLLSFWRIRQKRRRRRRGSGSARFSNI 1052
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12840677 12846622 - CcPI632755_06g009560.1 Cco06g0956 181556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco06g0956 1052 Gene3D Peptidase S8/S53 domain 194 485 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco06g0956 1052 ProSiteProfiles Serine proteases, subtilase domain profile. 193 487 - -
Cco06g0956 1052 MobiDBLite consensus disorder prediction 967 982 - -
Cco06g0956 1052 PRINTS Subtilisin serine protease family (S8) signature 253 266 IPR015500 -
Cco06g0956 1052 PRINTS Subtilisin serine protease family (S8) signature 217 236 IPR015500 -
Cco06g0956 1052 PRINTS Subtilisin serine protease family (S8) signature 420 436 IPR015500 -
Cco06g0956 1052 FunFam subtilisin-like protease SBT6.1 189 483 - -
Cco06g0956 1052 SUPERFAMILY Subtilisin-like 203 482 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco06g0956 1052 PANTHER PEPTIDASE S8 33 678 IPR050131 GO:0004252(PANTHER)|GO:0005794(PANTHER)
Cco06g0956 1052 Pfam Subtilase family 217 468 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco06g0956 1052 CDD Peptidases_S8_SKI-1_like 211 467 IPR034185 -
Cco06g0956 1052 Pfam Membrane-bound Site-1 Protease Family N-terminal domain 63 137 - -
Cco06g0956 1052 MobiDBLite consensus disorder prediction 966 985 - -
Cco06g0956 1052 ProSitePatterns Serine proteases, subtilase family, histidine active site. 257 267 IPR022398 -
Cco06g0956 1052 ProSitePatterns Serine proteases, subtilase family, serine active site. 421 431 IPR023828 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g0956 K08653 - csv:101222509 1947.94