Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g1249 ATGAAGATTGAATCAGTATTATTGAAGGTGCCACCGGTATGGGCGGCGGCGGTGACGGCAGCGGTGTTGATAATTGTGAGTGCAAAAATGGGTTTAATTTTATGGTGGAAGCCACGAAGAATAGAGAAGCACTTTGATAGGGAAGGAATTCGAGGCCCTCCTTATCGTTTCTTCATTGGTAATTTCAAAGAACTTGTTTCTATGATGCTTGCTGCTTCTTCTCATCCAATGCCCAATTTCTCTCATAATATTCTCCCTCGTGTTCTCTCTTTTTACCATCATTGGAAGAAAATTTACGGCTCCACCTTCTTGATTTGGTTCGGACCAATCGTTCGCGTCGCCGTCTCCGACCCGGACATGATCCGAGAAATCTTCACCACAAATTCCCACTTCTACGAGAAGAACGAAGCTCATCCTCTTGTCAAACAGCTCGAAGGCAATGGCCTCCTCACTCTCAAAGGCCAAAAATGGGCTCTCCATCGCAAACTCATTTCCCCCACTTTCCATATGGATAATCTCAGATTGTTGATTCCGTTGGTGGAGGAAAGTGTGGTGGAAATGGTGGAGAAATGGTCGGCTATGGCGGAGAGTGTTGACTCCAGTGAAGTCGAGATCGATGTTTTCGAGTGCTTCCAAACCCTAACGGAAGATGTTATTACAAAAACAGTATTTGGTAGTAGTTATGAAGATGGTAAAGCTATATTTAAGCTTCAAACTCAACAAATGATATTAGCTTCTCAAGCTTTTCAACAGGTTTTCATTCCTGGCTATAGATTTCTACCGACAAGAACGAATATAAATTCGTGGAAATTAGACAAACAAATAAGGAAATCATTGATGAAATTAATCGAGGGTCGAAAATGGAATTCAGAAAAAAAGTGGGCAATGGATGAAAAAAGGCCAAAAGATTTGTTAGGGCTGATGATTCAAGCTTCCTCCTTAAAAAATAATAATTCCATTACTGTCCGCGACATCGTTGAAGAATGTAAAGGTTTCTTCTTTGCTGGCAAACAAACTACTTCCAATCTGCTGACGTGGACTACTGTCTTGCTGGCAATGCATCCACAGTGGCAAATTCAGGCACGTGATGAGGTCTTTAACATCTGCGGTTCACGTGCCCTCCCTTCCAAAGATGATGTCTCCAAGTTCAAAATCCTGACCATGATACTAAATGAATCCTTACGGTTATACCCACCCACGGTGGCAACAATCCGACGTGCAAAGGCTGACGTGGAGCTAGGTGGAAGAATGATCCCATGTGGCACGGAGTTTTTGATTCCAATCCTGGCCGTTCATCATGATCAAACTATTTGGGGGAACGATGCAAGCGAGTTCAACCCGGGGCGGTTCTCAGAAGGAGTGGGTCGAGCCGGAAATCACCCGGCCGGGTTTATTCCGTTTGGACTTGGGGTTCGTACTTGCATTGGCCAAAATCTAGCGGTTTTGGAAGCAAAATTAACAATGGCAATTATACTTCAACGGTTCACGTTTCGTTTGGCTCCTACTTATCAGCATGCACCAACGGTCCTGATGCTTCTCTATCCACAATATGGGGCCCCCATTATTTTTCAAAAGATACCCCTAAATTAA 1590 43.77 MKIESVLLKVPPVWAAAVTAAVLIIVSAKMGLILWWKPRRIEKHFDREGIRGPPYRFFIGNFKELVSMMLAASSHPMPNFSHNILPRVLSFYHHWKKIYGSTFLIWFGPIVRVAVSDPDMIREIFTTNSHFYEKNEAHPLVKQLEGNGLLTLKGQKWALHRKLISPTFHMDNLRLLIPLVEESVVEMVEKWSAMAESVDSSEVEIDVFECFQTLTEDVITKTVFGSSYEDGKAIFKLQTQQMILASQAFQQVFIPGYRFLPTRTNINSWKLDKQIRKSLMKLIEGRKWNSEKKWAMDEKRPKDLLGLMIQASSLKNNNSITVRDIVEECKGFFFAGKQTTSNLLTWTTVLLAMHPQWQIQARDEVFNICGSRALPSKDDVSKFKILTMILNESLRLYPPTVATIRRAKADVELGGRMIPCGTEFLIPILAVHHDQTIWGNDASEFNPGRFSEGVGRAGNHPAGFIPFGLGVRTCIGQNLAVLEAKLTMAIILQRFTFRLAPTYQHAPTVLMLLYPQYGAPIIFQKIPLN 529
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 22529785 22531940 + CcPI632755_06g012490.1 Cco06g1249 181849
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco06g1249 529 Gene3D Cytochrome P450 34 525 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g1249 529 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g1249 529 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g1249 529 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g1249 529 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g1249 529 PANTHER CYTOCHROME P450 FAMILY MEMBER 23 518 IPR050665 GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER)
Cco06g1249 529 FunFam Cytochrome P450 734A1 35 527 - -
Cco06g1249 529 SUPERFAMILY Cytochrome P450 82 524 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g1249 529 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g1249 529 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g1249 529 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g1249 529 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g1249 529 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g1249 529 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco06g1249 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco06g1249 529 Pfam Cytochrome P450 89 505 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g2169 Cco-Chr5:30525184 Cco06g1249 Cco-Chr6:22529785 1.60E-106 dispersed
Cco05g2170 Cco-Chr5:30534743 Cco06g1249 Cco-Chr6:22529785 1.30E-116 dispersed
Cco06g1249 Cco-Chr6:22529785 Cco11g1763 Cco-Chr11:30369079 7.90E-109 dispersed
Cco03g1574 Cco-Chr3:30369716 Cco06g1249 Cco-Chr6:22529785 2.20E-116 transposed
Cco11g0302 Cco-Chr11:3027149 Cco06g1249 Cco-Chr6:22529785 2.00E-226 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g1249 K15639 - csv:101213466 937.947