Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco06g1353 | ATGGGCGTCACCATTCTTCCAGATCTCGGGGCTCAGATTTTCATTCCCCTTTGTGCTCTAGTCGGAATCCTCTTCTCTTTGGTGCAGTGGTACTACGTTTCACAAGTTAAGCTCTCTTCTTCCCGAGATTCCTCTAATAACAACTCCGCCGCTGCTAAAAATGGCTACTCCGACTACCTTATTGAGGAGGAAGAAGGTGTCAACGACCATAACGTTGTTATTAAATGTGCCGAAATTCAGAACGCCATCTCTGAAGGGGCAACCTCCTTCCTTTTCACGGAGTACTACTATGTTGGCATATTTATGGTATTGTTTGCAGTCTTGATTTTTGTATTCCTTGGGTCAGTTGAGGGGTTTAGTACCAAGCCCCAAGCGTGCTCATATGACAAAACAAAGACTTGCAAACCAGCTTTGGCGACGGCTATATTCAGCACTATATCATTTATACTTGGTGCAGTTACTTCAGTGGTTTCTGGATTCCTTGGAATGAAAATTGCTACATATGCAAATGCCAGAACCACCTTGGAGGCAAGAAAAGGTGTTGGAAAAGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTCCTCCTAGCTGCCAATGGTCTCTTGGTTTTGTTTATTGCCATTAACCTCTTCAAATTGTACTATGGTGAAGATTGGGGTGGTCTTTTTGAGTCTATCACTGGGTATGGTCTTGGTGGATCTTCCATGGCTCTCTTTGGTAGAGTTGGTGGTGGTATCTACACTAAAGCTGCTGATGTTGGTGCTGACCTTGTGGGTAAGGTGGAAAGGAACATTCCTGAGGATGATCCAAGAAATCCAGCTGTGATTGCTGATAACGTCGGTGACAATGTTGGGGATATTGCCGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAATCATCCTGTGCTGCTCTTGTTGTTGCTTCTATCTCCTCCTTCGGCAACAACCATGAGTTCACACCAATGCTCTATCCACTCATAGTTAGTTCTATGGGTATCCTTGTTTGCCTGATCACCACTTTATTTGCAACTGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAAGCAACTCATAATTTCCACTGTTCTAATGACCTTTGGAATTGCAATTGTTACTTGGTTGGCTGTTCCATCGAAATTCACCATCTTCAATTTTGGAACTCAAAAAGTTGTACAGAACTGGGAACTTTTCTTGTGCGTTGCTGTTGGTCTTTGGGCTGGGCTTATAATAGGATTTGTGACAGAGTATTACACTAGCAATGCATACAGCCCCGTGCAAGATGTTGCTGATTCTTGCCGAACTGGAGCTGCTACAAATGTTATTTTTGGCTTGGCCTTGGGATACAAATCTGTCATTATCCCTATTTTTGCAATTGCAGTTAGCATTTTTGTGAGTTTCTCCTTTGCTGCAATGTATGGCATTGCCGTTGCTGCCCTTGGAATGTTGAGTACAATTGCTACTGGTTTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGCATTGCAGAGATGGCTGGCATGAGCCACAGAATTCGGGAGAGAACCGATGCCCTCGATGCTGCTGGAAACACAACTGCAGCCATTGGAAAGGGTTTTGCCATTGGGTCAGCTGCTCTTGTGTCCCTTGCCCTCTTCGGTGCCTTTGTCAGCCGTGCTGGTGTCAGTGTTGTTGATGTCTTGACACCCAAAGTTTTCATTGGCTTGATCGTGGGTGCTATGTTGCCCTACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGGAGTGCAGCCCTAAAGATGGTTGAGGAGGTGCGAAGGCAATTTAACACCATCCCAGGTCTCATGGAGGGTACCGCCAAGCCCGACTATGCTACATGTGTCAAGATCTCAACTGATGCTTCTATCAAGGAGATGATCCCACCAGGTGCCCTTGTCATGTTGACACCCCTAATTGTTGGTATCCTATTTGGAGTTGAAACTCTTTCTGGCGTTCTTGCTGGATCCCTTGTTTCTGGTGTGCAGATTGCTATCTCTGCATCCAACACCGGAGGTGCCTGGGACAATGCTAAGAAGTACATCGAGGCTGGTGCCTCTGAGCATGCAAGAACCCTTGGCCCGAAAGGATCAGATCCACACAAAGCCGCTGTTATCGGTGACACAATCGGAGACCCACTCAAGGATACATCGGGACCTTCCCTCAACATTCTTATCAAGTTGATGGCTGTTGAGTCCCTTGTGTTTGCTCCTTTCTTCGCCAGTCACGGTGGTATTCTCTTCAAGATCTTCTAA | 2307 | 45.64 | MGVTILPDLGAQIFIPLCALVGILFSLVQWYYVSQVKLSSSRDSSNNNSAAAKNGYSDYLIEEEEGVNDHNVVIKCAEIQNAISEGATSFLFTEYYYVGIFMVLFAVLIFVFLGSVEGFSTKPQACSYDKTKTCKPALATAIFSTISFILGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGEDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHEFTPMLYPLIVSSMGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTFGIAIVTWLAVPSKFTIFNFGTQKVVQNWELFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVSVVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFASHGGILFKIF | 768 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 24028856 | 24033256 | + | CcPI632755_06g013530.1 | Cco06g1353 | 181953 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco06g1353 | 768 | Pfam | Inorganic H+ pyrophosphatase | 74 | 753 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Cco06g1353 | 768 | Hamap | Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. | 9 | 758 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Cco06g1353 | 768 | PANTHER | K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP | 6 | 766 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Cco06g1353 | 768 | NCBIfam | V-type H(+)-translocating pyrophosphatase | 12 | 763 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Cco06g1353 | 768 | PIRSF | H+-PPtase | 12 | 766 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g1629 | Cco-Chr2:28901797 | Cco06g1353 | Cco-Chr6:24028856 | 0.00E+00 | dispersed | |
Cco06g1353 | Cco-Chr6:24028856 | Cco09g0173 | Cco-Chr9:1568553 | 1.60E-115 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco06g1353 | K23025 | - | csv:101222673 | 1443.71 |