Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco06g1485 | ATGTTGATAACACTCAGAGAAGCTGCTGCAGCTTCTTCTTCGCCCATTCCCTTCACCCTCTCCACTCAATCTCTTACCAATTCTAAGCGCTTTCTAAGACCTAGAATTTCACTCACCCGAGCTTCCTTCTCTGTTCCAGGCAAGCCCAGCGCCACCAAATCCTGGAACCTTGCCCTCATTTCCAACAGTTTTGAGAGCTCAGTTTTTGATCCGTTGGGCATCCGTCCAGATCTTTCTTCCGAATTAAGTAGTACGTGGGAAAATTTTCTTGGCTATTTTGGTCAAACATTTGATAGTGCTTCAAGCACAAAAAAAGATAAATCCCCCTCAGCTCGTGGATTGGCAGCTGCAATCGAGGACAGTTCCATTGACATAGGGGATTTCTTCAAAGGTCCCTTGCCTGGAAAATTTCTACAGCTCTTGGGCTATTTAGCTCTTTCAAGGCTTGGAATCTATATACCTCTTGGTGGAGTGAACCGAGAGGCTTTTGTTGGGAACTTGGATCAGAATAGCTTATTGAGCACTTTAGATTCCTTTTCTGGAGGAGGCATTGGTAGGCTGGGGATATGCTCCCTTGGCATTGTTCCCTTCATCAATGCACAAATTGTCTTCCAGCTTCTTGCTCAAATTTATCCAAAATTGCAAGACCTTCAGAAAAGAGAAGGTGAAGCAGGGCGAAAGAAAATTCTGCAATATACTCGATATGCCTCAGTTGGATTTGCAATCGTACAAGCAATTGGCCAAGTTCTCTACCTTCGCCCCTATGTTAATGATTTTAGTACAGAATGGGTGCTCTCTTCTGTTACTTTATTAACACTTGGCTCAGTCATAACAACGTACATTGGGGAACGGATCACAGACCTAAAGCTAGGAAATGGGACATCTCTTTTAATATTCACCAGCATCATCTCCTATTTACCAGCATCCTTTGGAAGGACCGCTGCACAGGCATTCCAGGATGGTAACTATATAGGATTGGTTGCTATCATGATATCCTTCTTTCTATTGGTACTTGGAATTGTATATGTTCAGGAAGCAGAAAGGAAAATCCCCCTCAACTATGCGTCAAGATACACAAGCAGAGGTGGAGGACTTCAGAAATCTGCTTACCTGCCTTTCAAGGTAAATAGTTCTGGTGTGATGCCGATCATTTTCTCAACATCAACATTAGCCCTTCCAGGTACTCTAGCTCGCTTCACGGGGTTATCGGTCCTAAAGAAGGCTGCACTTGCTTTAAATCCAGGAGGTTCGTTCTATCTGCCAACCAACATCCTTTTGATAGCCTTCTTCAACTATTACTACACATTCCTACAATTGGATCCCGATGATGTGAGTGAACAATTGAAGCGGCAGGGTGCTTCGATTCCCCTCGTCCGTCCAGGCAAAAGTACAGCTTCATTTCTGAAAGCGGTTCTAAGTCGGATTTCAGTACTTGGTTCAGCCTTCTTGGCAATCCTTGCTGCTGGTCCTGCGGTGATTGAGCAAACAACACATTTGACGGCATTTCGAGGATTTGCGGGAACCTCTGTTCTTATACTTGTTGGTTGTGCTACAGACACTGCCAGAAAAGTACAAGCTGAGATAATTTCCCAGAAGTACAAGAATATAGAATTCTACGACATTGATAGCCCAAGCTCTTATAACGTTGGATTAAAGCAAGTAATTGATAAACTGTACATCAGGGAGGAATTAGGCAGTAGGCTCCCGTAA | 1710 | 43.8 | MLITLREAAAASSSPIPFTLSTQSLTNSKRFLRPRISLTRASFSVPGKPSATKSWNLALISNSFESSVFDPLGIRPDLSSELSSTWENFLGYFGQTFDSASSTKKDKSPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSVITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQAFQDGNYIGLVAIMISFFLLVLGIVYVQEAERKIPLNYASRYTSRGGGLQKSAYLPFKVNSSGVMPIIFSTSTLALPGTLARFTGLSVLKKAALALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDSPSSYNVGLKQVIDKLYIREELGSRLP | 569 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 25352525 | 25358884 | - | CcPI632755_06g014850.1 | Cco06g1485 | 182085 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco06g1485 | 569 | Hamap | Protein translocase subunit SecY [secY]. | 125 | 537 | IPR026593 | - | |
Cco06g1485 | 569 | PANTHER | SECY/SEC61-ALPHA FAMILY MEMBER | 128 | 536 | IPR002208 | GO:0005048(PANTHER)|GO:0006616(PANTHER)|GO:0008320(PANTHER)|GO:0009535(PANTHER)|GO:0015031(InterPro)|GO:0016020(InterPro) | |
Cco06g1485 | 569 | ProSitePatterns | Protein secY signature 1. | 188 | 207 | IPR030659 | - | |
Cco06g1485 | 569 | FunFam | Preprotein translocase subunit SECY, chloroplastic | 128 | 533 | - | - | |
Cco06g1485 | 569 | ProSitePatterns | Protein secY signature 2. | 280 | 297 | IPR030659 | - | |
Cco06g1485 | 569 | Pfam | SecY | 189 | 520 | IPR002208 | GO:0015031(InterPro)|GO:0016020(InterPro) | |
Cco06g1485 | 569 | PRINTS | Preprotein translocase SecY subunit signature | 378 | 397 | - | - | |
Cco06g1485 | 569 | PRINTS | Preprotein translocase SecY subunit signature | 417 | 439 | - | - | |
Cco06g1485 | 569 | PRINTS | Preprotein translocase SecY subunit signature | 229 | 252 | - | - | |
Cco06g1485 | 569 | PRINTS | Preprotein translocase SecY subunit signature | 261 | 286 | - | - | |
Cco06g1485 | 569 | PRINTS | Preprotein translocase SecY subunit signature | 137 | 155 | - | - | |
Cco06g1485 | 569 | PRINTS | Preprotein translocase SecY subunit signature | 506 | 524 | - | - | |
Cco06g1485 | 569 | PRINTS | Preprotein translocase SecY subunit signature | 187 | 207 | - | - | |
Cco06g1485 | 569 | PRINTS | Preprotein translocase SecY subunit signature | 287 | 310 | - | - | |
Cco06g1485 | 569 | PRINTS | Preprotein translocase SecY subunit signature | 472 | 490 | - | - | |
Cco06g1485 | 569 | Gene3D | SecY subunit domain | 128 | 533 | IPR023201 | - | |
Cco06g1485 | 569 | NCBIfam | preprotein translocase subunit SecY | 136 | 533 | IPR002208 | GO:0015031(InterPro)|GO:0016020(InterPro) | |
Cco06g1485 | 569 | SUPERFAMILY | Preprotein translocase SecY subunit | 129 | 527 | IPR023201 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco06g1485 | K10956 | - | csv:101222431 | 994.571 |