Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco06g1519 | ATGGCAACCCTCCAAATTCATGGCACCGAAACCGAAATCTATGTGGAGTTTCTGGTAGATCGAATCATCGACCTTCACAAAAGCATCTCGGAGCTTGAAACCCTAAAGCCATGCAAGAAAGTGAACAACCTCTTCACCAACCTAGTGACCTTGTGCATTTTGCCTTGTTCAATGGATGTCTCAACATTGCCACCAAATGTACAAGCCATTCGTGAGAGCCTCATAGTTCTATGTGGCCAAGCTGAAAGCTTACTCGAGTTAGAATTCTCAACTTTGCTAAGCAAAATCCCCAAACCTCTCAACAATCTCATTCTATTTCCATATTACCACAACTACATCAAATTAGCCAACCTTGAAAACAAGATTTTGAAAGACAATGGAGTTGTCAATCCAAAGAAGGTAGCTTTTGTTGGGTCAGGTCCTTTGCCTCTAACTTCAATTATTATGGCCATGAAACACATGAAGGGCACGCATTTCGATAACTATGATGTAGACAGCGTGGCTAATGACGTGGCAGGAAAGATCGTGGGATCGGACGCTGAGCTGGAGGGAAGAATGAAGTTTTGGACGAGGGATATTGTTGAGGTAAAAGAAGAGCTTGGAGGATATGATTGTGTGTTTTTGGCGGCTCTTGTGGGGATGAAGAAGGAAGATAAAGTGAAGATTATAAAGCATTTAAGAAAGTATATGAAAGAAGGTGGGATTGTGGTAGTGAGAAGTGCTAAAGGAGGTAGAGCATTTTTGTACCCTGTGGTTGAAGTTGGAGATTTGGTTGGCTTTGAGATTCTCTCTATTTTTCATCCCACTGATGATGTTGTTAATTCGGTTATCTTAGTTCGCAAGCCTGTGATTATATGA | 858 | 41.61 | MATLQIHGTETEIYVEFLVDRIIDLHKSISELETLKPCKKVNNLFTNLVTLCILPCSMDVSTLPPNVQAIRESLIVLCGQAESLLELEFSTLLSKIPKPLNNLILFPYYHNYIKLANLENKILKDNGVVNPKKVAFVGSGPLPLTSIIMAMKHMKGTHFDNYDVDSVANDVAGKIVGSDAELEGRMKFWTRDIVEVKEELGGYDCVFLAALVGMKKEDKVKIIKHLRKYMKEGGIVVVRSAKGGRAFLYPVVEVGDLVGFEILSIFHPTDDVVNSVILVRKPVII | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 25688122 | 25688979 | - | CcPI632755_06g015190.1 | Cco06g1519 | 182119 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco06g1519 | 285 | Gene3D | Vaccinia Virus protein VP39 | 14 | 282 | IPR029063 | - | |
Cco06g1519 | 285 | Pfam | Nicotianamine synthase protein | 15 | 282 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Cco06g1519 | 285 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 12 | 282 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Cco06g1519 | 285 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 10 | 285 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Cco06g1519 | 285 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 115 | 277 | IPR029063 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco03g1834 | Cco-Chr3:33027459 | Cco06g1519 | Cco-Chr6:25688122 | 3.10E-77 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco06g1519 | K05953 | - | csv:101209464 | 493.812 |