Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g1591 ATGAAGAACTTACCTCTCTACATCCTCCGATCTCCTCCGCGGTCTCTTCTCCGGTTGCCGCTGCCGGTCGCCAGCGCCTTCTTGTCTCACCTCTCCTATTTCATAACCATCTCTCTCTTAGGCTTTGGAGCTCTAAAGCTCACCAAAACTAGAAACTCCTCCTCCCCAAATGACCTCAACATTTTCTTCACCTCCGTCTCTGCAGTCTCCGTTTCAAGCATGTCCGTCGTTGAAATGGAAGTTTTTTCCAATTTCCAACTCCTCATCATCACCACCCTCATGTTCCTCGGCGGTGAAGTCTTCGTCTCTACCGTCGGGTTCCAACTCTCTCGCCGGTTCAAATACTTGAATGAGAAAAACCAAGTCGATTCGGCTCGGTCCATTGAGATGGAAAGTGGGACGTCGTCATCAACGATGGCCACCATTGATGAGTTGAGTACCTCAAAATCATGTTCAAAGCTTTTGGGTCGTATGATAATTGGATATCTTTTGACGACAAATGGCGTTGGTTCTTGTTTAATCTTCATTTACATCATCACGATCCCCCATGCAAAGCAAGTGCTTGAAAGCAAAGGCATCAACTTCCTTACTTTTTCAATTTTTAGTACAGTTTCTACTTTTACCAACTGTGGCTTCATACCTACTAATGAAAATATGATCGCTTTCAAGAACAACTCTGGCCTTCTGCTCATACTCATCTCGCAGGTGCTGTTGGGAGGTTGTTTATATCCGGTGGGTCTCCGGTTGGCAATAATGGCGGCAGCGAAGGTGACAGGGAAGAAGGAGTGGAGATACATATTGAAGAACTACTCAGAGATGGGGTATTCTCATCTCTTGTCGGGGCTCCGGTGTGGATTTCTGGCCGTGACGGCGGTGGGGCTCATAATTTTGCAATTGATTATCTTTTGCTCATTGGAATGGAACAACTCCGCCGGAATTTGGGATGGCCTGAATCCCTACCAGAAGTTCGTGGGATCACTTTTTCAGGTGACAAACTCAAGACATGCCGGAGAGTCGGTGGTGGATATCTCGGCAATCTCGCCCGCGACCTTGGTAGTTTTTGTTGTCATGATGTATCTCCCACCATACACAACCTTTTTACCCATAAGGAACAAAGAGATAGCTTCAATGTCACATGGGAAGGACAAAAGACAACACTTAGTGGAATTATTCACATTCTCACAGCTCTCCTATTTGGCCATTTTTATCATTCTCATATGCATCACAGAGAAAGAAAAGCTAAGAGATGATCCCCTTAACTTTACTGTTCTCAACATCACCCTTGAAGTGATCAGTGCATATGGAAATGTTGGGTTCTCAAGTGGGTATAGCTGCAAAAGACAAGTAAAAGTTGATAGCTCTTGCAAAGATGCATGGTATGGGTTTGCTGGAAGATGGAGTGCAAAGGGAAAATTCATTCTAATTCTTGTCATGATCTTTGGAAGAATGAAAAGTTTTAGTATGCATAGTGGTAGAGCTTGGAAATTATCATGA 1494 44.44 MKNLPLYILRSPPRSLLRLPLPVASAFLSHLSYFITISLLGFGALKLTKTRNSSSPNDLNIFFTSVSAVSVSSMSVVEMEVFSNFQLLIITTLMFLGGEVFVSTVGFQLSRRFKYLNEKNQVDSARSIEMESGTSSSTMATIDELSTSKSCSKLLGRMIIGYLLTTNGVGSCLIFIYIITIPHAKQVLESKGINFLTFSIFSTVSTFTNCGFIPTNENMIAFKNNSGLLLILISQVLLGGCLYPVGLRLAIMAAAKVTGKKEWRYILKNYSEMGYSHLLSGLRCGFLAVTAVGLIILQLIIFCSLEWNNSAGIWDGLNPYQKFVGSLFQVTNSRHAGESVVDISAISPATLVVFVVMMYLPPYTTFLPIRNKEIASMSHGKDKRQHLVELFTFSQLSYLAIFIILICITEKEKLRDDPLNFTVLNITLEVISAYGNVGFSSGYSCKRQVKVDSSCKDAWYGFAGRWSAKGKFILILVMIFGRMKSFSMHSGRAWKLS 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26504043 26509534 + CcPI632755_06g015910.1 Cco06g1591 182191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco06g1591 497 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 22 494 IPR051143 GO:0005886(PANTHER)|GO:0008324(PANTHER)
Cco06g1591 497 Pfam Cation transport protein 46 488 IPR003445 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g1590 Cco-Chr6:26466987 Cco06g1591 Cco-Chr6:26504043 2.10E-59 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g1591 K24976 - csv:101206239 805.053