Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco06g1705 | ATGGATGCTCGCCGAGGCTCTCGCGTCGTCAACCCCAAAGTTCGTCAGGTCGGATTCTTCACTCTCGACGCTCCTAATCCCCCCGGCCGCTCCCTCTCCGGTCCCGCCGACTGTGCCCCTTCTCAACAATCCCTCTCTCCTCCCACCAATTCCTTGTCTCCTGTCATGATTCCCCCTCCCCGTCATCTCTCCGATAACCTCGCCTCTCGCTCTGCTGTTTTTCCTGTTCCAGCTCCCGCCAATTGGAGGGATTCCGCCGATCATATTCATGTTGGCAGCTATAACCCCTCCGAAACACTGCTTGCTACGTCGCCTTCCACTAGAATTGGGGACGGAGAGCTGGACATGTCCGAGGATTCTTCCGCCTCCGTTCCATATCGCCGGAGTGGTTCCGGGAAGATTGCTTCGAGCTTTCCCGGCGTTGGAATCCACATGGCGGCTAAGTCGTCGGAGATTTCGCAGGCGCTGTTGGAACCTAATAAGGCTTTTGGAGTTGCAGAAAAGAATGGAGGGGCTTCCACAGAGGTACAAAATCGACAGCCACCATCAAATTCAAAACCCCTGAAGGCAAAAGCAACAAAGGCTGAAAGACGAGCATTACAGGAGGCACAACGAGCTGCAAAAGGTGAAGCGAAGAAGCCAGGTAATGCCCCTGGTAAAGCTGTGAAGCAGCCCTCTGCAATGAGAGATAGCACTGCCACACCTTCGGTGGTATCTACTGACAAAAGAGGAGGTGATAGAACACATGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGAATGCAGTTTGATGATAAAAACAGGGTAGAAAAGGCTAAAAAGCGAGCAGTTTTCAACCAAACTGAAGCTAGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATACGAGCAGGGAACTCAGCTTCCTGATCTTGTGTCAAAGTTTTTCCAACTTGACCCCATTCATCCTGCCATTTACAAGGTTGGTTTACAATATATGGCCGGAGATTTACATGGAGGCAATGCTCGTTGTATTGCTATGCTTCATGCATTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAGTCTTTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAACGAGTGCAGGCCTCTGTCTGTTAGCATGGGAAATGCAATTAGGTTTTTGAAAAACCTCATTGCCAAACTACCATTGAATCTTCCAGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATCAATCGCTTTATCAATGAAAAGATTATAATTGCAGATGAGGTCATAGTTAGACATGCTGCTACCAAAATCAGGGATGGAGATGTTCTTCTCACATATGGATCTTCATGTGCTGTAGAGATGCTTCTATTATATGCTCATGAGCTCGGAAAAGAATTTCGTGTTGTGGTGGTGGATTCCCGTCCAAAACTAGAAGGGCAAGCATTGCTTCGTAGGCTCATAGGGAGGGGCCTAAGTTGTACATACACTCATATAAATGCTATTTCTTACGTGATGCAGAAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTATCTAACGGAACTGTATATTCAAGAGTGGGAACTGCAGCTGTTGCCATGGTTGCTAACGCATTCCATGTTCCAGTCTTAATCTGTTGTGAAGCCTATAAATTCCATGAAAGGGTACAACTTGATTCAATATGTTTCAATGAATTAGGTGATCCGGATACTATCTCAAAGGTTCCAGGAAGGAAGGATATTAATCTAGATAATTTGACTGCTAAAGAACAACTGCAACATCTAAATTTAATGTATGATGCCACGCCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGATCCCACCTACAAGTGTGCCAGTGATCGTGCGCGAGTATCGGAGAGAGCACCTGTGGATATAA | 1923 | 46.13 | MDARRGSRVVNPKVRQVGFFTLDAPNPPGRSLSGPADCAPSQQSLSPPTNSLSPVMIPPPRHLSDNLASRSAVFPVPAPANWRDSADHIHVGSYNPSETLLATSPSTRIGDGELDMSEDSSASVPYRRSGSGKIASSFPGVGIHMAAKSSEISQALLEPNKAFGVAEKNGGASTEVQNRQPPSNSKPLKAKATKAERRALQEAQRAAKGEAKKPGNAPGKAVKQPSAMRDSTATPSVVSTDKRGGDRTHDKERKKDAPPPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDPIHPAIYKVGLQYMAGDLHGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECRPLSVSMGNAIRFLKNLIAKLPLNLPESEVKATLCSDINRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIGRGLSCTYTHINAISYVMQKVTRVFLGAAAVLSNGTVYSRVGTAAVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDTISKVPGRKDINLDNLTAKEQLQHLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLWI | 640 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 27605929 | 27612189 | + | CcPI632755_06g017050.1 | Cco06g1705 | 182305 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco06g1705 | 640 | Gene3D | - | 427 | 633 | IPR042529 | - | |
Cco06g1705 | 640 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B | 46 | 637 | - | - | |
Cco06g1705 | 640 | MobiDBLite | consensus disorder prediction | 190 | 209 | - | - | |
Cco06g1705 | 640 | MobiDBLite | consensus disorder prediction | 20 | 63 | - | - | |
Cco06g1705 | 640 | MobiDBLite | consensus disorder prediction | 242 | 272 | - | - | |
Cco06g1705 | 640 | MobiDBLite | consensus disorder prediction | 102 | 134 | - | - | |
Cco06g1705 | 640 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 287 | 633 | IPR037171 | - | |
Cco06g1705 | 640 | Pfam | Initiation factor 2 subunit family | 333 | 623 | IPR000649 | GO:0044237(InterPro) | |
Cco06g1705 | 640 | MobiDBLite | consensus disorder prediction | 36 | 51 | - | - | |
Cco06g1705 | 640 | MobiDBLite | consensus disorder prediction | 170 | 272 | - | - | |
Cco06g1705 | 640 | MobiDBLite | consensus disorder prediction | 227 | 241 | - | - | |
Cco06g1705 | 640 | MobiDBLite | consensus disorder prediction | 171 | 187 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco06g1704 | Cco-Chr6:27598309 | Cco06g1705 | Cco-Chr6:27605929 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco06g1705 | K03680 | - | csv:101214144 | 1180.24 |