Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g1851 ATGGAAGTTTCTGGGTTTATGCCCAACAAATGGACTGCAACCGCCCTTGGAATTTGGATTCAATGTATCTGCGGTGCTTCCTACACCTTCAGCATCTATTCTTCCGCTCTCAAGTCCTCCCAGGCCTACGATCAATCCACCCTTGACACCGTTTCCGTTTTCAAAGACATCGGCGCCAACGCCGGCATCATTTCTGGTTTTCTTTACTCCGCCGTCACTCCCCCGGCCCCCCGCTGGGCCTTTGTCGGGCCATGGGTGGTTCACGCCGCCGGAGCGACTCAATGCTTCCTCGGATATATATTCATATGGGCCGCTGTCTCTGGAGTGATCGATCGGCCGCCGGTGCCGGCGATGTGCTTCTTCATGTTTCTGGCTGCACATGCGCAAACGTTTTTCAATACGGCGAATGTGGTAACTGGCGTGCACAATTTTGTGCACTATAGCGGGACGATTGTGGGAATCATGAAGGGATATCTTGGTCTCAGTGGAGCACTGCTAATCCAAGTTTATAATACGACTTGCAATGGAGATCCAAGCAATTTTCTCCTCATGCTGGCGGTTTTGCCCACACTTCTTTCCATCATGTTCATGTGGTTTGTTAGAATTGACAAAACAAAGTCTAGTAATGAGATGAAGCATTTGAATTCATTGTCTGCACTTGCTGTGATAGTTGCTTTTTACCTAATGGTTGTCATCATCTTGAACAACACTTTCTCCCTTTCATCATGGACTCGTTTCTTTACATTCTCCATACTCTTGATTCTCCTTGCTGCTCCTCTTGCAATCGCCATTAATGCTCAGAGGGAAGACTTTAGAGAGTCATCTCCATCATTCCTCACTGAAAAAAGTCATGTTGTTAACAAACTCAAGTCAATGGATGCAGAGGATTCTGTTGAATATCATGAGTTGCCCAGGGATGAGAGCCAGACAGTGGCTGTTTCCAACTCTAGAATTCCTCAGGCCATGAATGTCTTGGAAGCTATACGCACTATAAACTTCTGGCTGTTGTTTCTTGCCATGGTGTGTGGAATGGGTTCTGGATTGGCCACAATAAACAACATGAGCCAACTTGGCCAGTCTCTTGGTTACACAGCAACAGAGACGAAGACATTTGTTTCGTTGTGGAGTATATGGAACTTTCTTGGACGTTTTGGAGCTGGTTACACCTCTGATTTTCTTCTCCACTCATATGGGTGGGCAAGGCCATTGTTAATGGCAATTACTCTAATGATAATGAGTGGCGGCCACATCGTGATCGCCTCCGGTTTCTCTGGAAATCTGTATGTGGGTTCAATTCTTGTTGGCATATGCTACGGCTCACAATGGTCATTGATGCCTACAATCACTTCAGAGATATTTGGTTTAGAGCATATGGGTACTATTTTCAACACCATAGCCATCGCCAGCCCTTTGGGGTCTTACATTTTTTCTGTTCGAGTTATCGGTTACATTTACGACAGAGAAGCTGCCGGAGAACATGGATCCTGCTCTGGTACACACTGTTTTGTGATATCTTTTCTTGTCATGGCCGTCGTGGCTTTCTTGGGATCTGTTGTTGCTGCTGCACTCTTCTTCCGAACCAGGAGATTTTATCGACTGGCGTTGCAAAGAAGAGTGGAATGTCTAAGTTAG 1632 46.2 MEVSGFMPNKWTATALGIWIQCICGASYTFSIYSSALKSSQAYDQSTLDTVSVFKDIGANAGIISGFLYSAVTPPAPRWAFVGPWVVHAAGATQCFLGYIFIWAAVSGVIDRPPVPAMCFFMFLAAHAQTFFNTANVVTGVHNFVHYSGTIVGIMKGYLGLSGALLIQVYNTTCNGDPSNFLLMLAVLPTLLSIMFMWFVRIDKTKSSNEMKHLNSLSALAVIVAFYLMVVIILNNTFSLSSWTRFFTFSILLILLAAPLAIAINAQREDFRESSPSFLTEKSHVVNKLKSMDAEDSVEYHELPRDESQTVAVSNSRIPQAMNVLEAIRTINFWLLFLAMVCGMGSGLATINNMSQLGQSLGYTATETKTFVSLWSIWNFLGRFGAGYTSDFLLHSYGWARPLLMAITLMIMSGGHIVIASGFSGNLYVGSILVGICYGSQWSLMPTITSEIFGLEHMGTIFNTIAIASPLGSYIFSVRVIGYIYDREAAGEHGSCSGTHCFVISFLVMAVVAFLGSVVAAALFFRTRRFYRLALQRRVECLS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28785481 28788301 + CcPI632755_06g018510.1 Cco06g1851 182451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco06g1851 543 Pfam Major Facilitator Superfamily 336 529 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cco06g1851 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 531 - GO:0016020(PANTHER)
Cco06g1851 543 Gene3D MFS general substrate transporter like domains 213 524 IPR036259 -
Cco06g1851 543 SUPERFAMILY MFS general substrate transporter 216 529 IPR036259 -
Cco06g1851 543 CDD MFS_Mch1p_like 10 516 - -
Cco06g1851 543 Pfam Nodulin-like 10 264 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g1851 Cco-Chr6:28785481 Cco06g1854 Cco-Chr6:28796046 2.00E-163 dispersed
Cco06g1851 Cco-Chr6:28785481 Cco06g1852 Cco-Chr6:28791221 2.30E-124 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g1851 - - - 0.0