Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g1853 ATGAGCATCGGCCATATCATCGTAGCTTTAGGATTTCGTGGGAATTTGTACTTGGGATCGGTGATTGTCGGGATTTGTTACGGGTCTCAATGGTCGTTAATGCCGGCAATTACGTCGGAGATATTTGGAGTAAAGCATATGGGTACGATTTACAATACCATTGCTGTGGCTAGTCCGATTGGATCTTATGTTTTGTCTGTTAGAGTTATTGGGTATATTTACGACAGAGAAGCCTCCGCCGGAGATAACTCTTGCTCCGGGGGACACTGTTTTATGACGTCTTTTCTGATCATGGCGGCGGTGGCTTTCTTGGGGTCTGTGGTTGTTGTTGCTCTGTTTTTCCGGACCAGAAGATTCTATCAACTTCTTGTACAGAGAAGGCTCAAAGATTAG 393 45.04 MSIGHIIVALGFRGNLYLGSVIVGICYGSQWSLMPAITSEIFGVKHMGTIYNTIAVASPIGSYVLSVRVIGYIYDREASAGDNSCSGGHCFMTSFLIMAAVAFLGSVVVVALFFRTRRFYQLLVQRRLKD 130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28792485 28792877 + CcPI632755_06g018530.1 Cco06g1853 182453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco06g1853 130 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 120 - GO:0016020(PANTHER)
Cco06g1853 130 SUPERFAMILY MFS general substrate transporter 7 118 IPR036259 -
Cco06g1853 130 Gene3D MFS general substrate transporter like domains 1 121 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g1853 Cco-Chr6:28792485 Cco10g1983 Cco-Chr10:33350382 1.20E-26 dispersed
Cco06g1853 Cco-Chr6:28792485 Cco06g1854 Cco-Chr6:28796046 4.30E-32 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g1853 - - - 0.0