Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco06g1946 | ATGGAGACTCTTCTTCATCATCTTCTTCCTCTTCAACTGTCACTTCATTCAATTTCCTTCACTATTTTCATCCTCATCCCCATCTTCCTTCTCCAAAAATGGCTTCTCTCCCCTTCACAAACCTCCCCTCCATCACCCCCAAAGCTTCCAATCTTCGGCCATCTTCTCAACCTCGGCTCCCATCCTCATCTCACTCTCCTAAACTACGCCCGCCACCATGGTCCTCTGTTTCTCCTCCGCCTCGGCTCTGTTCCCACCATCGTTGTTTCTTCCTCTGATCTCGCTCGTGATATCATGAAAACCCACGATCTCGTCTTCGCCAACCGACCCAAATCAACCATTGGCCACAAGCTTCTTTACAGCTCCAGAGACATAGCCGCTTCTCCCTACGGCGAGTACTGGCGGCAGATGAAAAGCGTTTGCGTTCTTCATCTCTTGAGCAGCAAAAGAGTTCAATCCTTCCGTTCTATAAGGGAAGAAGAAGTCAAATGCATGATCGAGAAGATCCAACACAACCCTGTTTCGGTGAATTTGACTGAAATCTTCTGTGGATTGACTAACAATGTGATTTGCAGAGTGGGTTTAGGGAGAAAATATGGAGCGGGAGAAGATGGGAAGAAGTTCATGGATCTTTTATTGGAATTTGGGCAATTATTGGGGAGTTTTAGCATTAGAGATTTCATTCCTTGGTTGGGTTGGATTGATGGGATTAGTGGGCTGGATTCTAAAGCAAACAGAGTAGCTAAAGAGCTGGATGATTTCTTTAACAGAGTGATTGAAGATCATATCAATCTAGAAAACAGAGACCAGCATTTTGATGAGCATAAGGATTTGGTAGATGTTTTGCTTTGGATACAGAGAGAAAACTCCATTGGTTTTCCCCTTCATATGGATAGCATCAAAGCTTTAATCTTGGACATGTTTGCAGCAGGCACAGACACAACTTACACAGTATTAGAATGGGCAATGTCAGAATTGTTGAAACACCCAGAAGCCATGGAGAAACTGAAGAATGAAATTAAAGAAATAAAAAGTGATCACAAAGGGTGCTATGTAAACCAGGATGATTTAGACAAAATGGTATATTTAAGGGCAATAATCAAAGAGACATTGCAACTACACCCACCCATTCCACTTCTCGTCCCGAGAGAATCAACCCAACACATAAAGTTAAGAGGGTATGATATTAAACGTGGGACTCGAGTTATGATTAATGCATGGGCAATCGGGAGAGACCCAAAATTATGGGAAGAAGCAGAGGAGTTTCGACCAGAAAGATTTATGAACAATTCAATAGATTTCAAGGGTCAGGATTTTGAGTTGATCCCATTTGGTGCAGGGAGAAGAGGATGTCCTGGAATTGTATTTGCAACTATGATTAATGAGATAGCTTTAGCAAATTTGGTGCACATGTTTGAGTGGATATTGCCAAATGGTGAGGATTTGGACATGACAGGAACCTTTGGTTTAACCATTCATAGAAAGTTTCCACTTGTGGCTACCGCAATTCCTAACAAGGAGTGA | 1524 | 42.52 | METLLHHLLPLQLSLHSISFTIFILIPIFLLQKWLLSPSQTSPPSPPKLPIFGHLLNLGSHPHLTLLNYARHHGPLFLLRLGSVPTIVVSSSDLARDIMKTHDLVFANRPKSTIGHKLLYSSRDIAASPYGEYWRQMKSVCVLHLLSSKRVQSFRSIREEEVKCMIEKIQHNPVSVNLTEIFCGLTNNVICRVGLGRKYGAGEDGKKFMDLLLEFGQLLGSFSIRDFIPWLGWIDGISGLDSKANRVAKELDDFFNRVIEDHINLENRDQHFDEHKDLVDVLLWIQRENSIGFPLHMDSIKALILDMFAAGTDTTYTVLEWAMSELLKHPEAMEKLKNEIKEIKSDHKGCYVNQDDLDKMVYLRAIIKETLQLHPPIPLLVPRESTQHIKLRGYDIKRGTRVMINAWAIGRDPKLWEEAEEFRPERFMNNSIDFKGQDFELIPFGAGRRGCPGIVFATMINEIALANLVHMFEWILPNGEDLDMTGTFGLTIHRKFPLVATAIPNKE | 507 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 29687952 | 29690045 | + | CcPI632755_06g019460.1 | Cco06g1946 | 182546 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco06g1946 | 507 | Gene3D | Cytochrome P450 | 37 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | PANTHER | CYTOCHROME P450 71B11-RELATED | 21 | 501 | IPR050193 | - | |
Cco06g1946 | 507 | SUPERFAMILY | Cytochrome P450 | 43 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | Pfam | Cytochrome P450 | 43 | 491 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | FunFam | Cytochrome P450 83B1 | 30 | 501 | - | - | |
Cco06g1946 | 507 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | PRINTS | E-class P450 group I signature | 94 | 115 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | PRINTS | E-class P450 group I signature | 405 | 429 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | PRINTS | E-class P450 group I signature | 70 | 89 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | PRINTS | E-class P450 group I signature | 364 | 382 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | PRINTS | E-class P450 group I signature | 185 | 203 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Cco06g1946 | 507 | CDD | CYP71-like | 73 | 498 | - | - | |
Cco06g1946 | 507 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Cco06g1946 | 507 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco03g0325 | Cco-Chr3:3607856 | Cco06g1946 | Cco-Chr6:29687952 | 1.60E-122 | dispersed | |
Cco05g2866 | Cco-Chr5:36285927 | Cco06g1946 | Cco-Chr6:29687952 | 4.30E-87 | dispersed | |
Cco05g2867 | Cco-Chr5:36293239 | Cco06g1946 | Cco-Chr6:29687952 | 4.70E-83 | dispersed | |
Cco06g1946 | Cco-Chr6:29687952 | Cco11g0030 | Cco-Chr11:380718 | 4.20E-99 | dispersed | |
Cco04g1773 | Cco-Chr4:32677857 | Cco06g1946 | Cco-Chr6:29687952 | 7.50E-96 | transposed | |
Cco05g0098 | Cco-Chr5:839160 | Cco06g1946 | Cco-Chr6:29687952 | 1.80E-89 | transposed | |
Cco07g0958 | Cco-Chr7:22075655 | Cco06g1946 | Cco-Chr6:29687952 | 3.20E-70 | transposed | |
Cco11g0041 | Cco-Chr11:496808 | Cco06g1946 | Cco-Chr6:29687952 | 2.40E-67 | transposed | |
Cco03g0320 | Cco-Chr3:3564714 | Cco06g1946 | Cco-Chr6:29687952 | 1.70E-117 | wgd | |
Cco05g2861 | Cco-Chr5:36227444 | Cco06g1946 | Cco-Chr6:29687952 | 1.40E-79 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco06g1946 | - | - | - | 0.0 |