Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g1969 ATGGCGAGAGTTAACGATAATTGGGAGAGGCTAGTGCGTGCGACTTTGAAGAGAGAGCAGCTCAGAAACGCAGGGCAAGGCCATGGGAGGACTCCCAGTGGGATTGTTGGAGCTGTACCACCCTCTCTTGGAAAAACCACAAACATTGACGCTATTTTGCAGGCTGCCGATGAAATCCAAGCGGAGGACTCCACTGTTGCTAGGATTTTGTGTGAGCAAGCGTACAGAATGGCACAAAACTTGGATCCCAACAGCGATGGTAGAGGTGTTCTTCAGTTCAAGACTGGATTGATGTCTGTTATTAAGCAAAAACTTGTAAAGAAGGATGGGGCATCTATAGATCGTCATCATGATATTGAACATCTGTGGGAGTTCTACAAGCAATATAAGAGACGACATAGAATAGATGATATACAGAAAGAAGAACAGAAATGGCGGGAGTCAGGAGTAATGAGTGCTAACTTGGGAGAGTTGGAGCTTAGATATTCTGAAGCGAAGAAAGTAATTGCTAACTTAAGGGCTTTAGTTGAGGTGATGGAGGCCCTCAGCGGAGATGCAGATCCTCAAGGAGTTGGAAGATTGATTATGGAGGAGCTACGAAGAGTTAGAAGTTCTGATACTACATTATCGGGGGAATTTGTACCCTACAATATTGTCCCCTTGGATGCACAATCACTAACAAACGCCATTGGCATTTTCCCTGAAGTTAAGGCTACAATATCTGCAATCAAATATACAGAGCATTTCCCTAGACTGCCTTCGGAATTTCAGATATCTGGACAAAGGAGTGCAGATATGTTTGACCTTCTTGAATATGTATTTGGATTCCAGGGGGACAACATAAGAAATCAACGAGAGCATGTGGTTCTCATGGTAGCAAATGCTCAATCTCGTCTTGGCATACCTAATAATGCTGATCCGAAAATAGATGAGAAAGCAGTCAATGAGGTTTTTTTGAAGGTGCTTGATAACTACATCAAGTGGTGTAAATACTTGCGTATTCGCCTTGCATGGAATAGCTTAGAGGCAATTAATAGGGACAGGAAGCTTTTCCTTGTTTCACTGTACTTGCTTATATGGGGTGAAGCTGCAAATGTTCGCTTCCTTCCCGAATGCATTTGCTATTTGTTCCACCATATGGCAAAGGAATTGGATGCTATACTTGATCATGGAGAAGCAATTCCTTCTAAAAACTGTATGCTGGAAGATGGTTCTATGTCTTTCCTCCAACGAATCGTTTGTCCTATCTACGAGACACTTGTAGCCGAAACTGAAAGAAACAAAAATGGGAAAGCTGCACATTCAGCATGGAGGAACTACGATGATTTCAATGAATACTTTTGGTCACCTACTTGCTTTGAATTGGGCTGGCCAATGAGGAAGGAATCAAATTTTTTACAGAAGCCTAGAGGCTCGAAACGGACTGGCAAGACTTCTTTTGTTGAGCATCGCACATTTCTTCATTTGTATCGCAGTTTCCACCGTCTTTGGATCTTTTTGGCAATTGTATTCCAGGCTCTGACAATTTTTGCCTTCCACAATGAGCGTATTAATTTGGACACTATCAAAGCTATTCTTAGCATTGGGCCAACATTTGCAATCATGAACTTTATTGAGAGCTCCTTAGATGTATTGCTTACTTTTGGGGCATACACGACTGCAAGAGGAATGGCTATATCAAGGATTGTTATTAGGTTCTTCTGGTGGGGATTAAGTTCAGTTTTTGTGACTTATGTTTATGTGAAGGTTCTTGAAGAAAGAAATACTCGAAGCTCAGATAATTCATTCTATTTTCGAATATATATTATAGTATTGGGTGTTTATGCTGCTTTACGTCTTGTGGTTGCAATGTTGCTGAAGTTACCTGCATGCCATACTCTTTCTGAGATGTCAGATCAGTCTTTTTTTCAATTTTTCAAATGGATCTATCAGGAACGTTATTTCGTCGGTCGTGGCCTATATGAAAAACCAAGTGACTATTGCAGATATGTAGCCTTTTGGTTAGTGCTCTTGATTTGTAAATTTGTTTTTGCTTACTTTCTCCAGATTCAACCACTTGTCCAACCAACCACTATTATTGTCAACCTTCCATCTCTTGAATATTCGTGGCATTCTTTCATTTCGAAGAATAACAATAATGTGTCGACTGTGGTTAGTTTATGGGCTCCTGTTGTGGCTCTCTATCTGTTGGACATTTACATATGGTACACACTCTTGTCTGCCATCATTGGTGGTGTAAAGGGTGCTCGGGGTCGTTTGGGAGAGATACGATCACTTGAAATGATGCACAAACGTTTTGAGAGCTTTCCAGAAGCATTTGTGAAGAACCTTGTCTCTACACAGACAAAAAGTTTGCCACCCACGGGACAAGCAACTCAGGACTCTCCGGATATGAGCAAGACATATGCAGCAATCTTTTCCCCATTTTGGAATGAGATCATTAAAAGTTTACGTGAGGAAGACTTCATTAGCAATAGGGAGATGGACTTGCTTTCTATTCCCAGCAACACAGGGAGCCTCAGATTGGTCCAATGGCCTTTGTTTCTTTTAAGTAGTAAGATATTCTTGGCTGTTGATCTGGCTTTGGATTGCCAAGATACGCAGACAGATCTATGGTACAGAATATGTCGGGATGAATATATGGCATATGCAGTTCAAGAATGCTACTATAGTGTTGAAAAAATCTTATATGCCCTTGTCGATGGTGAAGGGAGACTTTGGGTTGAAAGGATATTTCGGGAGATTACCAATAGTATTTCAGAGGGCTCGCTGGTTATAACATTGAACCTTAAGAAGATTCCAATTGTTTTACAAAAGTTTACGGCGCTTACAGGGCTTTTGACTCGAAATGAAACTCCTGAACTTGCTAGAGGTGCTGCAAAAGCTGTATTTGAGCTTTATGAGGTTGTTACCCATGACCTGCTTTCATCAGATTTGAGGGAGCAGCTTGATACATGGAATATCTTGTTGAGGGCAAGAAACGAAGGTCGCCTTTTTTCTCGGATTCAGTGGCCCAAAGATTTGGAAATTAAAGAGCTTGTGAAGCGTCTGCATTTACTTCTTACCGTGAAGGACTCTGCAGCTAACATCCCAAAAAATCTTGAAGCAAGAAGAAGACTACAGTTTTTTACAAATTCATTATTTATGGACATGCCTTCGGCAAAACCTGTCAGTGAAATGGTGCCGTTCAGCGTCTTTACTCCATACTACAGTGAAACTGTGCTTTATAGTTCCTCTGAAATACGAATGGAAAACGAGGATGGCATATCCATTCTTTTCTATCTTCAGAAGATTTTTCCAGATGAATGGGAGAACTTTTTGGAACGGATTGGTCGGGGTCATGCCACTGGGGAAGCAGAGCTCCAAAAAAGTCCAAGTGATGCATTGGAGCTTCGATTTTGGGTTTCTTATAGAGGGCAGACTCTAGCTCGGACAGTTCGTGGTATGATGTACTACAGAAGAGCTTTAATGCTTCAGAGCTATCTGGAGAAGAGATCATTTGGGGATGATTATTCTCAAACGAACTTCCCCACGAGTCAGGGCTTTGAGTTATCTCGAGAATCAAGGGCACAAGCAGACTTGAAGTTCACTTATGTTGTTTCCTGTCAAATATATGGGCAACAAAAGCAGAGAAAAGCTCCAGAGGCTGCTGATATTGCTCTTTTGCTGCAGCGGAATGAGGGACTTCGTGTTGCTTTCATTCACGTGGAAGATAGTGTTGCATCTGACGGTAAGGTTGTAAAGGAATTTTATTCGAAGCTTGTGAAAGCTGATATACATGGAAAAGATCAGGAGGTATATTCGATCAAACTTCCTGGAGAACCAAAGCTAGGAGAAGGAAAACCTGAAAACCAAAACCATGCTATAGTTTTCACTCGTGGAGATGCTGTTCAAACTATTGACATGAACCAGGACAACTATCTTGAAGAGGCATTGAAAGTGAGAAATCTTCTGGAGGAATTTCATGGAAAGCATGGGCTTCGCCCTCCTACCATCTTAGGCGTGAGAGAGCATGTATTCACTGGAAGTGTCTCTTCGTTAGCGTGGTTCATGTCCAATCAGGAAACTAGCTTTGTAACCTTAGGACAACGTGTCTTGGCAAGTCCTCTCAAGGTCCGAATGCATTATGGGCATCCTGATGTGTTTGACCGTATATTTCATATAACTCGAGGTGGCATTAGCAAGGCATCACGTGTGATCAACATTAGTGAGGATATATATGCAGGTTTCAACTCCACTTTGAGGCAGGGTAACATTACACACCACGAGTACATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTAAACCAAATAGCCCTGTTTGAAGGGAAAGTAGCTGGTGGGAACGGAGAGCAAGTTCTCAGCAGGGATGTTTACAGGCTTGGGCAACTTTTTGATTTCTTCAGAATGCTTTCGTTTTATTTCACAACTGTTGGTTACTATGCATGTACAATGATGACAGTTCTTGTGGTTTACATTTTCTTGTATGGACGGGTTTACTTGGCCTTTGCTGGACTTGACGAAGCAATCTCAAGAAGAGCAAAAATGTTGGGAAACACAGCATTGGATACTGCACTGAATGCTCAGTTTTTGTTTCAGATTGGAGTTTTTACAGCAGTCCCTATGATAATGGGTTTTATACTTGAACTTGGACTGCTGAAGGCTGTTTTTAGCTTCATAACTATGCAGCTTCAGTTATGTTCCGTCTTCTTCACATTCTCGTTGGGGACTAGAACTCATTATTTTGGACGAACCATTCTCCATGGTGGTGCCAAGTATCGAGCAACTGGCAGAGGCTTTGTGGTCCAGCACATCAAATTTGCTGAAAATTATCGCCTCTACTCAAGAAGTCATTTCATCAAGGCGCTTGAGGTGGCATTGCTTCTTATTGTCTACATTGCGTATGGGTATTCAGAAGGAGGTGCAAGTTCTTTTGTTTTACTTACTCTCAGCAGTTGGTTCCTCGTCATTTCATGGCTCTTTGCTCCTTATATCTTCAATCCATCTGGTTTTGAGTGGCAAAAGACTGTGGAGGATTTTGACGATTGGACGAGCTGGCTATTCTACAAAGGTGGAGTAGGGGTTAAGGGAGAGAACAGCTGGGAATCATGGTGGGATGAGGAACAGGCACATATTCAAACATTCCGGGGTCGAATATTGGAGACAATCTTGACTGTGAGGTTCTTCCTATTTCAATTTGGAATTGTGTACAAGCTCCATCTCACAGGAAAGGACACATCACTTGCGTTATATGGTTTCTCGTGGGTGGTGCTCATTGGGATTGTTTTGATATTCAAGATCTTCACCTTCAGTCCTAAAAAATCAACGAACTTCCAGCTATTGATGAGATTTATTCAGGGTGTCACAGCCATTGTACTGGTTACAGCTCTTGGTCTAATTGTTGGCTTTACTAACCTATCGATAACCGATTTATTTGCAAGTCTTCTGGCATTTATTCCTACTGGATGGGCTATATTATGTTTAGCAGTTACTTGGAAGAAAGTGGTGAGAAGTCTAGGCTTGTGGGACTCGGTACGTGAATTTGCCAGGATGTATGATGCTGGGATGGGATTAATAATATTCGTGCCCATCGCATTCTTATCCTGGTTTCCATTCATTTCCACGTTCCAGTCTCGTCTGCTCTTCAACCAAGCTTTCAGCCGCGGGCTTGAGATCTCCCTCATCCTTGCTGGAAACAAAGCAAACGTCGAGACATACTGA 5721 41.97 MARVNDNWERLVRATLKREQLRNAGQGHGRTPSGIVGAVPPSLGKTTNIDAILQAADEIQAEDSTVARILCEQAYRMAQNLDPNSDGRGVLQFKTGLMSVIKQKLVKKDGASIDRHHDIEHLWEFYKQYKRRHRIDDIQKEEQKWRESGVMSANLGELELRYSEAKKVIANLRALVEVMEALSGDADPQGVGRLIMEELRRVRSSDTTLSGEFVPYNIVPLDAQSLTNAIGIFPEVKATISAIKYTEHFPRLPSEFQISGQRSADMFDLLEYVFGFQGDNIRNQREHVVLMVANAQSRLGIPNNADPKIDEKAVNEVFLKVLDNYIKWCKYLRIRLAWNSLEAINRDRKLFLVSLYLLIWGEAANVRFLPECICYLFHHMAKELDAILDHGEAIPSKNCMLEDGSMSFLQRIVCPIYETLVAETERNKNGKAAHSAWRNYDDFNEYFWSPTCFELGWPMRKESNFLQKPRGSKRTGKTSFVEHRTFLHLYRSFHRLWIFLAIVFQALTIFAFHNERINLDTIKAILSIGPTFAIMNFIESSLDVLLTFGAYTTARGMAISRIVIRFFWWGLSSVFVTYVYVKVLEERNTRSSDNSFYFRIYIIVLGVYAALRLVVAMLLKLPACHTLSEMSDQSFFQFFKWIYQERYFVGRGLYEKPSDYCRYVAFWLVLLICKFVFAYFLQIQPLVQPTTIIVNLPSLEYSWHSFISKNNNNVSTVVSLWAPVVALYLLDIYIWYTLLSAIIGGVKGARGRLGEIRSLEMMHKRFESFPEAFVKNLVSTQTKSLPPTGQATQDSPDMSKTYAAIFSPFWNEIIKSLREEDFISNREMDLLSIPSNTGSLRLVQWPLFLLSSKIFLAVDLALDCQDTQTDLWYRICRDEYMAYAVQECYYSVEKILYALVDGEGRLWVERIFREITNSISEGSLVITLNLKKIPIVLQKFTALTGLLTRNETPELARGAAKAVFELYEVVTHDLLSSDLREQLDTWNILLRARNEGRLFSRIQWPKDLEIKELVKRLHLLLTVKDSAANIPKNLEARRRLQFFTNSLFMDMPSAKPVSEMVPFSVFTPYYSETVLYSSSEIRMENEDGISILFYLQKIFPDEWENFLERIGRGHATGEAELQKSPSDALELRFWVSYRGQTLARTVRGMMYYRRALMLQSYLEKRSFGDDYSQTNFPTSQGFELSRESRAQADLKFTYVVSCQIYGQQKQRKAPEAADIALLLQRNEGLRVAFIHVEDSVASDGKVVKEFYSKLVKADIHGKDQEVYSIKLPGEPKLGEGKPENQNHAIVFTRGDAVQTIDMNQDNYLEEALKVRNLLEEFHGKHGLRPPTILGVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLASPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMLSFYFTTVGYYACTMMTVLVVYIFLYGRVYLAFAGLDEAISRRAKMLGNTALDTALNAQFLFQIGVFTAVPMIMGFILELGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVQHIKFAENYRLYSRSHFIKALEVALLLIVYIAYGYSEGGASSFVLLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLFYKGGVGVKGENSWESWWDEEQAHIQTFRGRILETILTVRFFLFQFGIVYKLHLTGKDTSLALYGFSWVVLIGIVLIFKIFTFSPKKSTNFQLLMRFIQGVTAIVLVTALGLIVGFTNLSITDLFASLLAFIPTGWAILCLAVTWKKVVRSLGLWDSVREFARMYDAGMGLIIFVPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANVETY 1906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29819166 29854445 + CcPI632755_06g019690.1 Cco06g1969 182569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco06g1969 1906 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 39 1900 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Cco06g1969 1906 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 349 457 IPR026899 -
Cco06g1969 1906 Pfam 1,3-beta-glucan synthase component 1030 1725 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
Cco06g1969 1906 Coils Coil 155 175 - -
Cco06g1969 1906 SMART FKS1_dom1_2 347 460 IPR026899 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1433 Cco-Chr3:28555120 Cco06g1969 Cco-Chr6:29819166 0.00E+00 dispersed
Cco03g1434 Cco-Chr3:28638775 Cco06g1969 Cco-Chr6:29819166 8.80E-26 dispersed
Cco03g1436 Cco-Chr3:28671516 Cco06g1969 Cco-Chr6:29819166 1.00E-49 dispersed
Cco03g1437 Cco-Chr3:28717903 Cco06g1969 Cco-Chr6:29819166 0.00E+00 dispersed
Cco03g1439 Cco-Chr3:28743102 Cco06g1969 Cco-Chr6:29819166 2.10E-99 dispersed
Cco03g1441 Cco-Chr3:28775800 Cco06g1969 Cco-Chr6:29819166 2.00E-35 dispersed
Cco03g1442 Cco-Chr3:28791021 Cco06g1969 Cco-Chr6:29819166 1.80E-164 dispersed
Cco03g1444 Cco-Chr3:28827245 Cco06g1969 Cco-Chr6:29819166 2.40E-93 dispersed
Cco03g1445 Cco-Chr3:28840466 Cco06g1969 Cco-Chr6:29819166 3.20E-77 dispersed
Cco03g1447 Cco-Chr3:28860812 Cco06g1969 Cco-Chr6:29819166 1.30E-253 dispersed
Cco06g1969 Cco-Chr6:29819166 Cco09g0359 Cco-Chr9:3176434 0.00E+00 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g1969 K11000 - csv:101217890 3703.68