Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco06g2033 ATGACAGCGGTTGATGGAGAACGCATGCAGAGGCTGATGAACAGTATTTTGGAGGCATCAGACACGAGGGACATTTGTTTTTTTTTTTTAAAAAAAGGAACTTTGGGTAATTATAGTCGGATCAAGATCTACTACGTCTTCATCCAGCTACAGAATAATAATAATAATAATAATAATCTACAGTCTACGCCTCCCTCCAAGGTGCAGTTGCCAGTTGCTAATCCAAATCAACCACTCCAGAAACAGAAACCGAAAAGGGAGAGAAACCGAGGTCTGATACCATATACATACGCTTCGCTTCGCTTTACTTTGCTTTTCAAGACACTGTACAAACTACAGTACTACCATTCACTTCCACTCAACCTTTCCTTCTGTTATGGAAAAACACCATCCCCTTCATCATCAGGTGCCCCTTTTCTTCCCTCTCTCAACTCCTTTCATTCTCTTCCTCTGATCTCATCCCCTCTCTTTTATGTTATGCCGGAATACCAGGATATCAAGGACCTCGACTTGGATCTCGGACCCGACGAGCCTGATCTTGCCCCTCTCCCCCCCACCGTTACTTCCCGGGTACTGCACATGTTGGGAGACATCGCAGCAGGTCCCGCTTACAGGTTTTCCCAATGGCTTGAACTCGTCCGTAAACGTAGCGGCAAACATCGCGCTTCTGCCTTCCACAACCGCCCTCATCCACCTTTCGATATGCCTTTCGGCGCTGAGGAGCTTGTCAATGAATCAAGAACTCTTCCAGCTCCCGAGCAATCAACTGAAACGAATTTGTGGGATAGACTCGCTAAAGCTTCAATGTTGGATATCGAGTCGAGCTGTTTTTCGTGGGATAGGCTTTTGTCTCTTCACCGCACCGAACACAGTAGTAGCACTGAACATTCGGAAGATGAGATGAATAAAGCCCTTGAGGTCACTGTAAATTCTGGTGGAGTCGTTTTCTTTGCACTGTTCAATCAGCTTGGATATGATGATAACGTCCCAAAGGAAGCAGCTGCTGTGATAAAGATATCATCTTCAAGAATGGCCACGCAATCTGAACGCCTTGGTTATGAATTTGCTAAGTGGCTTGGGGTTCAAACTCCACAGGCTAGAGTTATTCATAATTCCAGCACGGAATGGCTCCAGATAAAAGAAGCTGCAGAGAAAGCACGAGATATTGCCTGTTTGGAGGGTGATGAGGTTGGTGAAATGACATGTTCTGAACTATTGGAAGCACTTGAATTTAGCAGATGCCTTTTTCTGATGAGCTATGTGCATGGATCTCCATTGTTGGAAAGCTCAAGTGCATTTGAATCACGAGAAATGGCTGAAAAATTAGCTGCTGCAATTGGAAGGATCTTACTGTTGGACCTTGTCATTAGAAATGAAGATAGGCTCCCTTGTCGTCTTCTTCGTTGGCGTGGAAATTCGGCAAATTTGCTCTTGGCTGATAGAATGACATCTGCAAATATGAATGCATTTGAGGAAGCCTTTGATTCTGCTATTAAGCGATACAAACCAAAAGTCATTACAACGCTTCAAAAAGAAAGAAGGGCAACTTCAGTGGATAATAGATCGAGTTCTAATTCAGGGTTGGTTTCAGAGGTGTCTGAACTTTGTGATATTGTTGAATCCCCAAAATCTAGTAACCTAAGTATAAAAAGTCAAATATCAGATGAAGCATTGCCTTGTGATTTTAATATTGTGGCTATTGACTCTGGTGTTCCTCGTCGACCTCCTGCTGGAAAACGTGCTAATGACCAATCAATTTACCCAAAATTAGTCGAGTTGCTACTTAACAGTTCTGAGTTCTCCTCTAATCTGCTGCATGACATTACAGGAGGGAAATTAGGGTTCCCTTCATCAACCGATGCCAACTCAACTTGTGGCATGCAGCTTACAGATATGAGTTCTATTGTCCATGAATTTCGATATGGGTTTCGTGCTGCTCTTAGAGACTTGCAAGGATTTCACATATTTTTGCTTACCCTTCACCAAAAGTTAGACAACTCATTACGAGCGTTCATGAATATCATAAATAAATTTCCCTTGGGGGAATCTGACAAAGAGGATGCAGGTGTTCCTGAGTCCCATTTGCAGGGTTCTACCACTACTCATTGTTTATCTCCACGTGGTAAGGAACGAGCCTCTAGTGATGGTAATATAGATGTTACAGAGTCAGCTCTAAGATCATCATCGTCAGGAAATAAAGAAAGCTCAGACTTATCTTCTCCCTTGTCACGAGATAGCTCACAAGGAAAGCTATACAAAGGAAGTGCAGAGCCCATTCATAGCCTTCGTTTGACTGCAAAGCTTCGAGACTTTCATAAATTTGCCAAAGTTGATGCTGAATCAAATAAAGAATTGGATATGTGGAATGAAGTGCTAAAGAATGAAGCTGTTAAACTCTGCCAGGAGAATAAATTTAATACTGGGTTTTTTGAGGGCAGCGATAGTCATGGAGTTGTTGATGCTTATGAATTGAAGGTGAGACTTGAGCACATTCTTGAAAGGATTGCACTAATATCCGAGGCTGCAAATACAGAAAGGCCTTCTTCAGTTACACCTGCCTTGTTTATAGGCGGTGCCTTGGCTGCAAGATCTGTTTACACTCTTCAGCATCTAGGAGTTACTCATATTTTATGTCTCTGCTCAAATGAAATTGGGCAGTCAGATTCTCAGTTTCCTGATCTATTTGAATACAAAAATTTTTCGATAAGTGATGATGAAGACTCAAACATCAGCAGCATCTTTGAAGAAGCTTCTGATTTTGTTGATGACGTTGAAAGAAAGGGTGGGAAGGTCCTGGTTCATTGTTTTGAAGGGAAAAGCAGAAGTGCCACATTAGTTCTTGCTTACTTGATGCTCAGAAAGAAATACACACTGTTAAAAGCATGGAATGCCTTGAAACGGGTTCACCGGCGAGCTCAACCTAATGATGGGTTTGCCAAAGCATTATTAGAGTTAGATCGAAGAATACATGGAAAGGTATCCATGGAGTGGCAATCACGGAAACCAACCATGAAAGTTTGCCCAATTTGTGGGAAAAATGCTGGACTGAGCAGTAGCTCACTGAAACTTCATTTGCAAAAATCACACAAGAAGCTATCATCTGGGAGTGTAGACAGCGCAATGACCATGGAAATACAGAAAGCATTGACAGCTCTGAGGATCAGTCGTGGAGGAAGCGTGAGCCCAACCCAGAGGCAATCTCTTCTCATCTTGGATGAATAG 3222 42.61 MTAVDGERMQRLMNSILEASDTRDICFFFLKKGTLGNYSRIKIYYVFIQLQNNNNNNNNLQSTPPSKVQLPVANPNQPLQKQKPKRERNRGLIPYTYASLRFTLLFKTLYKLQYYHSLPLNLSFCYGKTPSPSSSGAPFLPSLNSFHSLPLISSPLFYVMPEYQDIKDLDLDLGPDEPDLAPLPPTVTSRVLHMLGDIAAGPAYRFSQWLELVRKRSGKHRASAFHNRPHPPFDMPFGAEELVNESRTLPAPEQSTETNLWDRLAKASMLDIESSCFSWDRLLSLHRTEHSSSTEHSEDEMNKALEVTVNSGGVVFFALFNQLGYDDNVPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNSSTEWLQIKEAAEKARDIACLEGDEVGEMTCSELLEALEFSRCLFLMSYVHGSPLLESSSAFESREMAEKLAAAIGRILLLDLVIRNEDRLPCRLLRWRGNSANLLLADRMTSANMNAFEEAFDSAIKRYKPKVITTLQKERRATSVDNRSSSNSGLVSEVSELCDIVESPKSSNLSIKSQISDEALPCDFNIVAIDSGVPRRPPAGKRANDQSIYPKLVELLLNSSEFSSNLLHDITGGKLGFPSSTDANSTCGMQLTDMSSIVHEFRYGFRAALRDLQGFHIFLLTLHQKLDNSLRAFMNIINKFPLGESDKEDAGVPESHLQGSTTTHCLSPRGKERASSDGNIDVTESALRSSSSGNKESSDLSSPLSRDSSQGKLYKGSAEPIHSLRLTAKLRDFHKFAKVDAESNKELDMWNEVLKNEAVKLCQENKFNTGFFEGSDSHGVVDAYELKVRLEHILERIALISEAANTERPSSVTPALFIGGALAARSVYTLQHLGVTHILCLCSNEIGQSDSQFPDLFEYKNFSISDDEDSNISSIFEEASDFVDDVERKGGKVLVHCFEGKSRSATLVLAYLMLRKKYTLLKAWNALKRVHRRAQPNDGFAKALLELDRRIHGKVSMEWQSRKPTMKVCPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALRISRGGSVSPTQRQSLLILDE 1073
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30286592 30302256 + CcPI632755_06g020330.1 Cco06g2033 182633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco06g2033 1073 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 181 1072 IPR035010 GO:0004721(InterPro)|GO:0009737(InterPro)|GO:0043622(InterPro)
Cco06g2033 1073 FunFam Dual specificity protein phosphatase PHS1 818 992 - -
Cco06g2033 1073 ProSiteProfiles Dual specificity protein phosphatase domain profile. 846 991 IPR020422 GO:0006470(InterPro)
Cco06g2033 1073 Pfam Actin-fragmin kinase, catalytic 257 518 IPR015275 -
Cco06g2033 1073 MobiDBLite consensus disorder prediction 57 87 - -
Cco06g2033 1073 MobiDBLite consensus disorder prediction 717 750 - -
Cco06g2033 1073 SMART dsp_5 846 988 IPR020422 GO:0006470(InterPro)
Cco06g2033 1073 MobiDBLite consensus disorder prediction 57 80 - -
Cco06g2033 1073 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 911 967 IPR000387 GO:0016311(InterPro)
Cco06g2033 1073 MobiDBLite consensus disorder prediction 693 707 - -
Cco06g2033 1073 SUPERFAMILY Protein kinase-like (PK-like) 208 584 IPR011009 -
Cco06g2033 1073 MobiDBLite consensus disorder prediction 685 753 - -
Cco06g2033 1073 CDD DSP 847 984 - -
Cco06g2033 1073 Pfam Dual specificity phosphatase, catalytic domain 858 987 IPR000340 GO:0016311(InterPro)
Cco06g2033 1073 Gene3D Protein tyrosine phosphatase superfamily 824 992 IPR029021 -
Cco06g2033 1073 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 846 990 IPR029021 -
Cco06g2033 1073 ProSitePatterns Tyrosine specific protein phosphatases active site. 933 943 IPR016130 GO:0016311(InterPro)
Cco06g2033 1073 Gene3D - 425 557 IPR036940 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco06g2033 K14165 - csv:101220184 1640.17