Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco07g0102 | ATGGGAAAAGAGCAATTAGAAGTACTAAATGCACTTGATGTAGCAAAAACACAATGGTACCATTTCACAGCAATCATAATTGCTGGAATGGGATTCTTCACAGATGCATATGATCTATTTTGCATATCTCTTGTGACAAAATTACTTGGACGAATATACTATCATGTTGATGGTGCAGCAAAGCCAGGGACATTGCCTCCAAATGTTGCTGCTGCTGTTAATGGTGTGGCATTTTGTGGAACTCTAGCAGGCCAACTCTTCTTTGGTTGGTTGGGTGACAAAATGGGAAGAAAAAGAGTTTATGGAATGACTCTAATGTTGATGGTTATATGCTCCATAGGCTCAGGCCTTTCCTTTGGCCACAATTCACAATCTGTTATGACTACTCTTTGCTTCTTTCGATTTTGGCTCGGCTTCGGTATTGGTGGCGATTACCCTCTTTCCGCAACGATCATGTCCGAGTACTCGAATAAGAAGACTCGTGGTGCATTCATTGCTGCAGTGTTTGCTATGCAAGGGTTTGGAATTTTGGGTGGAGGTATATTTGCCATTTTCATCTCTTTGGCATTCAAGGCCAAGTTTGATGCTCCACCTTATGCACTTGATCCAACTAAATCAACTGTGCCACAAGCAGATTACATTTGGAGGATAGTTCTCATGGTTGGGGCTCTTCCTGCTGCTCTTACTTATTATTGGAGGATGAAAATGCCTGAAACGGCACGGTACACGGCTTTGGTAGCAAAAGATACAACTCAAGCTGCATCAGATATGTCAAAAGTTTTGCAGATGGAAATCGAGGTAGAAGCACAAAAGCCTACTACGCATACGCCAAATGCAAATGCAGGTGCAAGTGCATACGGCTTCTTCTCCAAAGAATTCTTCCGTCGCCATGGAACTCACTTACTTGGAACTACAAGTACTTGGTTTTTGCTTGATATTGCATTTTATAGTCAAAACTTGTTCCAAAAAGATATCTTCAGTGCAATTGGATGGATTCCTCCAGCAGCCACTATGAATGCAATTGAAGAAGTTTTTAGAATAGCAAGGGCTCAAACACTCATTGCCCTCTGCAGCACTGTCCCTGGCTATTGGTTCACAGTGGCTTTCATTGACAAAATGGGAAGATTTGCCATTCAACTCATGGGATTCTTCTTCATGACAGTCTTCATGTTTGCTTTAGCCATTCCATACCATCATTGGACTTTGAAGGACAATCGGATTGGCTTTGTTGTCCTCTACTCACTAACATTCTTTTTTGCGAATTTTGGACCGAATGCAACAACTTTCGTTGTCCCAGCTGAAATCTTTCCAGCACGATTCCGTTCTACTTGCCACGGTATATCATCAGCATCTGGGAAGCTTGGAGCTATGGTGGGTGCATTTGGTTTTCTATATTTGGCTCAAAACCAGGACAAGAACAAAACTGATGCAGGATATCCTCCTGGCATTGGTGTTAAGAATTCACTTCTATTGTTGGGTGGACTTAACTTTTTGGGAATTTTGTTTACTTTTCTTGTGCCTGAAGCAAAAGGAAAATCATTGGAAGAGATGTCAGGTGAAAACGAAGATGGAACCACTGGAGAATTGGGGGGCCTACCACATACCAACAATATGATCTCACATGTTTAA | 1629 | 41.87 | MGKEQLEVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAAKPGTLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVICSIGSGLSFGHNSQSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIFISLAFKAKFDAPPYALDPTKSTVPQADYIWRIVLMVGALPAALTYYWRMKMPETARYTALVAKDTTQAASDMSKVLQMEIEVEAQKPTTHTPNANAGASAYGFFSKEFFRRHGTHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIEEVFRIARAQTLIALCSTVPGYWFTVAFIDKMGRFAIQLMGFFFMTVFMFALAIPYHHWTLKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDKNKTDAGYPPGIGVKNSLLLLGGLNFLGILFTFLVPEAKGKSLEEMSGENEDGTTGELGGLPHTNNMISHV | 542 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1049884 | 1051512 | + | CcPI632755_07g001020.1 | Cco07g0102 | 182755 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco07g0102 | 542 | NCBIfam | phosphate:H+ symporter | 11 | 520 | IPR004738 | GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro) | |
Cco07g0102 | 542 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 9 | 516 | - | - | |
Cco07g0102 | 542 | MobiDBLite | consensus disorder prediction | 515 | 542 | - | - | |
Cco07g0102 | 542 | Pfam | Sugar (and other) transporter | 26 | 518 | IPR005828 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Cco07g0102 | 542 | FunFam | Inorganic phosphate transporter 1-6 | 20 | 529 | - | - | |
Cco07g0102 | 542 | Gene3D | MFS general substrate transporter like domains | 272 | 531 | IPR036259 | - | |
Cco07g0102 | 542 | Gene3D | MFS general substrate transporter like domains | 20 | 267 | IPR036259 | - | |
Cco07g0102 | 542 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 24 | 511 | IPR020846 | GO:0022857(InterPro) | |
Cco07g0102 | 542 | SUPERFAMILY | MFS general substrate transporter | 12 | 518 | IPR036259 | - | |
Cco07g0102 | 542 | CDD | MFS_PhT | 25 | 510 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco07g0102 | Cco-Chr7:1049884 | Cco08g0685 | Cco-Chr8:18155511 | 2.10E-88 | dispersed | |
Cco07g0119 | Cco-Chr7:1283427 | Cco07g0102 | Cco-Chr7:1049884 | 0.00E+00 | transposed | |
Cco08g0683 | Cco-Chr8:18150366 | Cco07g0102 | Cco-Chr7:1049884 | 6.90E-55 | transposed | |
Cco08g0684 | Cco-Chr8:18155001 | Cco07g0102 | Cco-Chr7:1049884 | 9.20E-55 | transposed | |
Cco11g1953 | Cco-Chr11:32071316 | Cco07g0102 | Cco-Chr7:1049884 | 8.20E-141 | transposed | |
Cco05g0497 | Cco-Chr5:3970309 | Cco07g0102 | Cco-Chr7:1049884 | 1.00E-233 | wgd | |
Cco06g0725 | Cco-Chr6:8259503 | Cco07g0102 | Cco-Chr7:1049884 | 4.10E-238 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco07g0102 | K08176 | - | mtr:25499257 | 900.582 |