Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0138 ATGGATTTCCATACGCAAATGGGTTTTCTTCTTTTCCTCTGTTTTCTTTCACTTCAAGTTCAACCAAACACTTCCACTCTTCAAACTTACATCATTCAACTCCACCCACATGGCTTAACCACCTCTCCTTTTGATTCTAAGCTTCAATGGCATCTTTCTTTTCTTGAACAAACTCTTTCTGTTGAAGAAGACTCTTCTTCTCGCTTGCTTTACTCTTATTCTAATGCTATGGAAGGGTTTGCAGCTCAGTTATCTGAAACTGAGCTTGAGTATTTGAAGAAGTTGCCTGATGTAGTGGCTGTTAGAGCTGATAGAAAGTATCAAATTCAGACGACTTACTCTCATAAATTCTTGGGGCTTAGTGTAGGCAGACAAGGAGTTTGGCAAAAGTCCTCAATGGGCCAAGGGGCAATAGTTGGGGTTCTTGACACTGGAGTTTGGCCTGAAAGTCCAAGCTTTAGTGATTCCAAAATGCCCCCAATTCCACAAAAATGGCGAGGGGCTTGCCAAGAAGGGCAAGATTTTAATTCATCTAATTGTAACAGGAAACTCATTGGTGCCAAGTTCTTTATCAAAGGACATCATGTGGCTTCATCGTCATTGCAACCTTCCGATGTTGACCAGGAGTATGTCTCCCCAAGAGACTCTCATGGCCATGGGACTCACACGTCTTCTACTGCTGCGGGAGCTTCGGTTGCCGAAGCTAGCGTTTTCGGCAATGGAGCTGGTGTGGCACAAGGGATGGCCCCGGGAGCCCACATTGCGGTGTACAAGGTTTGCTGGTTTAGTGGCTGCTATAGCTCTGATATTGTAGCAGCTATGGATTCTGCAATAAAAGATGGTGTTGACATTCTTTCCCTTTCGCTCGGTGGCTTCCCGCTTCCGTTTTTCGACGACAGCATTGCTATTGGCAGTTTTCGAGCAATGCAGCATGGCATCTCAGTCGTTTGTGCAGCAGGAAACAATGGTCCAACTCAAAGCTCTGTTGCCAATGTAGCTCCTTGGATCACCACCATCGGTGCAGGCACGCTTGACCGAAGATTCCCAGCTATAGTTCGACTAAGCAACGGAGAAGCCATTTATGGCGAATCAATGTACCCTGGAAACAAGTTCAAGCAAGCTACCAAGGAGCTTGAAGTGGTTTATTTGACTGGAGGGCAAATGGGAGGTGAGCTTTGTTTAAAAGGGTCACTTCCACGAGAACAAGTAGAAGGCAAAATGGTGGTTTGTGACCGTGGCGTCAATGGCAGATCCGAAAAGGGGCAAATTGTGAAGGAATCTGGAGGTGCTGCTATGATCCTTGCAAATTCAGCGATAAATCTGGAGGAAGACTTGGTTGATGTTCATGTTTTGCCAGCCACTTTGATCGGATTTGCAGAGGCAAATCGCTTAAAAGTTTATATTAACACCACAACGAATCCAAAAGCCAGAATCCAATTTGGAGGAACTGTGATTGGAAGATCAAGAGCTCCCTCAGTAGCTCAGTTTTCATCTAGAGGTCCAAGCCTCTCTAATCCTTCAACTCTCAAGCCTGATGTAATTGCTCCTGGAGTCAACATTATAGCAGCTTGGCCTCAAAACCTTGGTCCAACTGGCCTTCCAGAAGATTCTAGAAGATCAAACTTCACTGTCATGTCAGGAACTTCCATGGCTTGTCCCCATGTCAGTGGAATTGCAGCTCTAATCCATTCAGCTCACCCAAAATGGACACCTGCAGCTATCAAATCAGCCATTATGACAACTGCTGATGTTACTGATCATTTTGGGAAACCAATTCTTGATGGCAACAAACCAGCCGGTGTTTTTGCAATGGGAGCTGGTCATGTAAACCCAACAAGAGCAAATGATCCTGGTCTGATCTATGATATCAAACCATATGAATATGTCATTCATCTTTGTGCTCTTGGATACACTCATTCAGAAATCTTCATTATCACCCACATGAATGTGAGCTGCCACAAAGTTCTGCAGATGAACAAAGGCTTCACTCTCAACTATCCCTCCATGTCTGTCATTTTTAAGCACGGAACGACGAGTAAGATGGTTTCGAGACGGTTGACGAATGTTGGGAGCCCAAATTCCATCTACGAAGTGGAAGTAGCTGCACCCAAAGGAGTGAGAGTTCGAGTTAAGCCTCGACGCTTGGTGTTCAAACATGTGAACCAAAGTTTGAATTATAAGGTATGGTTTATGTCTGAGAAAGGAAAGGAAGGAGGAAAGGTGAGCTCTACAGAAGGGCATTTGACATGGCTTCATTCCCAGAATAGCAACTACAGAGTTAGAAGCCCAATTGTAGTGACTTGGAAGAACTAA 2313 44.7 MDFHTQMGFLLFLCFLSLQVQPNTSTLQTYIIQLHPHGLTTSPFDSKLQWHLSFLEQTLSVEEDSSSRLLYSYSNAMEGFAAQLSETELEYLKKLPDVVAVRADRKYQIQTTYSHKFLGLSVGRQGVWQKSSMGQGAIVGVLDTGVWPESPSFSDSKMPPIPQKWRGACQEGQDFNSSNCNRKLIGAKFFIKGHHVASSSLQPSDVDQEYVSPRDSHGHGTHTSSTAAGASVAEASVFGNGAGVAQGMAPGAHIAVYKVCWFSGCYSSDIVAAMDSAIKDGVDILSLSLGGFPLPFFDDSIAIGSFRAMQHGISVVCAAGNNGPTQSSVANVAPWITTIGAGTLDRRFPAIVRLSNGEAIYGESMYPGNKFKQATKELEVVYLTGGQMGGELCLKGSLPREQVEGKMVVCDRGVNGRSEKGQIVKESGGAAMILANSAINLEEDLVDVHVLPATLIGFAEANRLKVYINTTTNPKARIQFGGTVIGRSRAPSVAQFSSRGPSLSNPSTLKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRSNFTVMSGTSMACPHVSGIAALIHSAHPKWTPAAIKSAIMTTADVTDHFGKPILDGNKPAGVFAMGAGHVNPTRANDPGLIYDIKPYEYVIHLCALGYTHSEIFIITHMNVSCHKVLQMNKGFTLNYPSMSVIFKHGTTSKMVSRRLTNVGSPNSIYEVEVAAPKGVRVRVKPRRLVFKHVNQSLNYKVWFMSEKGKEGGKVSSTEGHLTWLHSQNSNYRVRSPIVVTWKN 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1442141 1444453 - CcPI632755_07g001380.1 Cco07g0138 182791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0138 770 MobiDBLite consensus disorder prediction 200 226 - -
Cco07g0138 770 CDD Peptidases_S8_3 107 583 IPR034197 -
Cco07g0138 770 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Cco07g0138 770 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Cco07g0138 770 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Cco07g0138 770 FunFam Subtilisin-like protease SBT1.5 136 359 - -
Cco07g0138 770 FunFam subtilisin-like protease SBT1.5 345 485 - -
Cco07g0138 770 SUPERFAMILY Protease propeptides/inhibitors 51 109 - -
Cco07g0138 770 Pfam Subtilase family 134 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco07g0138 770 Pfam PA domain 380 464 IPR003137 -
Cco07g0138 770 Gene3D Peptidase S8/S53 domain 137 628 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco07g0138 770 ProSiteProfiles Serine proteases, subtilase domain profile. 112 615 - -
Cco07g0138 770 FunFam Subtilisin-like protease SBT1.9 19 110 - -
Cco07g0138 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Cco07g0138 770 Gene3D - 345 485 - -
Cco07g0138 770 Pfam Peptidase inhibitor I9 29 109 IPR010259 -
Cco07g0138 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 58 764 IPR045051 -
Cco07g0138 770 Pfam Fibronectin type-III domain 664 766 IPR041469 -
Cco07g0138 770 Gene3D - 632 768 - -
Cco07g0138 770 CDD PA_subtilisin_like 352 478 - -
Cco07g0138 770 SUPERFAMILY Subtilisin-like 122 616 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco07g0138 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 110 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g0138 Cco-Chr7:1442141 Cco07g0706 Cco-Chr7:12620244 3.50E-182 dispersed
Cco07g0138 Cco-Chr7:1442141 Cco03g1557 Cco-Chr3:30197602 3.10E-186 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0138 - - - 0.0