Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco07g0242 | ATGTTTAATTCCTTATTCTTCTTCTTCTTCATTCTGTTAGTTCACTGTAAATCTTCTGAAATTGCTGGAGGTGGTCGTAGATTGCTTCATCAACCATTTTTCCCACTTGATTCTGTTCCTCCGGCGGAGCCGCCGTCGACTCCGGTACCACCGCCACCGAATCCCAAGTACCCATTTTCCACTACCCCTCCTACTAATCCTGATGGGTCTCCATTTTTTCCGACGTATCCTGGAACCCCACCTCCTCCGGCGCCGGCGAGTTTCGCATCGTTTCCGGCTAATATTTCTTCTCTGATTCTACCTCATTCGTCTCAGTCTGGTTCAGCTTCTAAGAAGGTTGTTCCGTTGGTTGTTGCTGGGGTTGTTTCCGTTGTCTTGGTTGTCTGCATTGCTGGGTTTTTGTACTGGCGGAGACGGCGTGGTCGTGGGTTGGGCGATGACAAGACGTACAGATCCGAAAATAGTAGCCGGTTGTGTCCGGTTCCGAATGTTGAAGTCGGTAATGGAATCCCTAAGTTGAGACATCCCTCTGCTACTAGCTCTGAGTTTCTGTATTTGGGTACTCTTGTGAACTCGAGAGCGATCGATGAGCGTTCCGTTGGGGGAGCTCGTGTTGCTGATCCTAGGTCGTTGGATTCGCCGGAGCTTCATCCGCTTCCGCCGTTGAATTTTGGTCGGTCGAGTGAGAAGCAAAATTGTGGAAATGGAGAGGAGAGATCGATGGGAGATGAGGAGGAAGAGGAATTTTACTCTCCTAAAGGTTCTCTCGGCGCAATTGGTTCGGGATCTCGAAGAGTGCTCGCAACAATGGCGGCTGAAGATTTGCTTGGCAAAACCAGCGATTCGAGCACTACTTCGTATTCCACATCCAGCGGTTCCGTTTCGCCGGCGAGATCACGTTCTAAGAGTCTCTCTCTATCTCCACCGGCGAGTTTGAGCCCAAGAAGATCCGTTCAAAATGAATCTTCTAATTTCTCTGTTTCTGCCACTGTAGCGACGGAGCAACATTCACCGCCATTGACGCCGCCGCTTTCCCACGCCGGGGTGGAATCAGACGACGGCGTTAAATCCCATTGCCCATCACCAATGCGTTTATCGACGGATAAAGTTCCGGAGAAAAGCTCCACCGCATCTTCATCCCGGAGGTATTCTAATGTTTCAGTTCACAGTGTGATGTTCCCAATTTCAACAACCGCTAAGGATTTAGTTAATCATGACGATACGAGCAATAATCACGAAGAATCTCCAAGACAATCCCATAATTCAGATCCAGACGAGCCGTTTCCATTTTCTCCTTGTTTGTTTCCTCTTTCGGATGGAATTTTAGGGCAAATTCAGATTCAACTGCCCACGGTTTCAAACATTCCCGATTCCGATTCTGAAGCAAAACTTAAGCAACTTCCTTACTCCTTTACTTCATCTTCACCTTCATCGTCGCCGGAGAGAGTAGTTACGGACTCATCTCCGTCAAGAACATCCATTATTACAGATCAAAACAGGTCTTCTCCACCATCACCAGAGAGAATTGTGTTTAGTGATTCAGATTCATCAAAGAGAACTCTAGACCATTTTGATCAAGATGTGAAATCTTCTTCTGCTGACATCAATACCACTGATGTGGGTCCGCTGCAATCTCCTTCTACAGCTCCTCCGCCACCTCCCCCACCTCCCCCGCCTCCCCCACCACCCCCGCCCCCGGTAGCCCCTCTGCCAGAACGCTGGGAAATGCCCATTTCTCCTTCTACACCAATGGACCAATCCATTCCAAAGGCGCCTCCTCCATTAGTGCCTCCATTAAGGCCATTTATAATGGAGAATGTGAAAAATGTCTCACCAATTCAGTTGCCATCCTGCAAAAGCAATGGCGAATCATCTGAAGACACCCCCAAGCCCAAGTTGAAGCCATTGCATTGGGACAAAGTAAGGGCCAGTTCTGATCGTGAGATGGTGTGGGATCAACTCAGATCAAGCTCTTTTAAAGTGAATGAGGAAATGATTGAAACTCTGTTTGTTGTGAACACTTCCAACTCAAAGGAGACAACTCCACGCACCGTGCTTCCTCCACCTAACCAAGAGATCGGAGTTCTCGATCCCAAAAAGTCGCAGAACATTGCAATTGCGTTACGGGCGCTTAATGTGACCATAGAGGAAGTTTGTGATGCCCTTTTAGAAGGTAATGCAGATGCACTTGGAGCAGAGCTACTTGAAAGTTTATTGAAGATGGCTCCAACAAAAGAAGAAGAACGTAAACTAAAGGCATCCAAGGACGTCTCACCTACAAAGTTTGGCCCTGCTGAGAAATTTTTGAAGGCAGTCCTTGATGTTCCTTTTGCATTTAAAAGGGTGGATGCAATGCTTTACATAGCAAATTTTGAGTCCGAGATTGAGTACCTAAAGAAATCATTCGAGAATCTTGAGACTGCTTGCGAGGAATTGAGGAATAGCAGGATGTTCTTGAAACTTTTGGAAGCTGTGCTCAAGACCGGGAATCGGATGAATGTTGGCACCAACCGCGGTGATGCCCATGCCTTCAAACTTGACACACTTTTGAAGCTTGTTGATGTCAAGGGTGCAGATGGAAAAACCACTCTTCTGCATTTTGTTGTACAAGAAATCATAAGAAGTGAAGGAGCTCGTCTTTGTGTCACGAGTCAAATTCCAAACTCCAACCCGAGTGATGATGCCAAATGCAGGAAACTCGGCCTGCAAGTTGTATCGGGTCTCAGCTCGGAGCTTGCCAACGTAAAGAAGGCAGCTTCAATGGATTCCGATGTGCTCAGTGGCGAGGTCATCAAGCTTTCGAGAGGACTCGACAACATCAGAGAGGCTCTACGTCTAAACGAAGCAGACGGGCCAAATGAAAGCACAGAAAAGTTCTCTGAGTCAATGAGCAGATTCTTGAAAATGGCAGAAGAGGATATCATCAGAGTCCAAGCCCATGAAAGTGTTGCTTTATCTCTAGTAAAGGAGATCACAGAGTACTTCCATGGCAACTCTGCCAAAGAAGAAGCTCACCCATTTAGAATTTTCATGGTGGTGAGAGATTTCCTAACAATTCTTGATGGAGTCTGCAAAGAAGTCGGAATGATAAACGAGCGGACGATTGTAAGTTCTGCCCATAAATTTCCAGTTCCAGTGAATCCAACATTACCACAAGCATTTCAAGCTCTTCATAGAGTGCAGAAATACAATTCTTCTGATGAAGAAAGTGAACAATCCCCATAA | 3225 | 46.73 | MFNSLFFFFFILLVHCKSSEIAGGGRRLLHQPFFPLDSVPPAEPPSTPVPPPPNPKYPFSTTPPTNPDGSPFFPTYPGTPPPPAPASFASFPANISSLILPHSSQSGSASKKVVPLVVAGVVSVVLVVCIAGFLYWRRRRGRGLGDDKTYRSENSSRLCPVPNVEVGNGIPKLRHPSATSSEFLYLGTLVNSRAIDERSVGGARVADPRSLDSPELHPLPPLNFGRSSEKQNCGNGEERSMGDEEEEEFYSPKGSLGAIGSGSRRVLATMAAEDLLGKTSDSSTTSYSTSSGSVSPARSRSKSLSLSPPASLSPRRSVQNESSNFSVSATVATEQHSPPLTPPLSHAGVESDDGVKSHCPSPMRLSTDKVPEKSSTASSSRRYSNVSVHSVMFPISTTAKDLVNHDDTSNNHEESPRQSHNSDPDEPFPFSPCLFPLSDGILGQIQIQLPTVSNIPDSDSEAKLKQLPYSFTSSSPSSSPERVVTDSSPSRTSIITDQNRSSPPSPERIVFSDSDSSKRTLDHFDQDVKSSSADINTTDVGPLQSPSTAPPPPPPPPPPPPPPPPPVAPLPERWEMPISPSTPMDQSIPKAPPPLVPPLRPFIMENVKNVSPIQLPSCKSNGESSEDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIETLFVVNTSNSKETTPRTVLPPPNQEIGVLDPKKSQNIAIALRALNVTIEEVCDALLEGNADALGAELLESLLKMAPTKEEERKLKASKDVSPTKFGPAEKFLKAVLDVPFAFKRVDAMLYIANFESEIEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRSEGARLCVTSQIPNSNPSDDAKCRKLGLQVVSGLSSELANVKKAASMDSDVLSGEVIKLSRGLDNIREALRLNEADGPNESTEKFSESMSRFLKMAEEDIIRVQAHESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTILDGVCKEVGMINERTIVSSAHKFPVPVNPTLPQAFQALHRVQKYNSSDEESEQSP | 1074 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2495221 | 2499628 | + | CcPI632755_07g002420.1 | Cco07g0242 | 182895 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco07g0242 | 1074 | MobiDBLite | consensus disorder prediction | 545 | 573 | - | - | |
Cco07g0242 | 1074 | Gene3D | Formin, FH2 domain | 628 | 1041 | IPR042201 | - | |
Cco07g0242 | 1074 | MobiDBLite | consensus disorder prediction | 405 | 421 | - | - | |
Cco07g0242 | 1074 | MobiDBLite | consensus disorder prediction | 530 | 544 | - | - | |
Cco07g0242 | 1074 | Pfam | Formin Homology 2 Domain | 625 | 1020 | IPR015425 | - | |
Cco07g0242 | 1074 | MobiDBLite | consensus disorder prediction | 278 | 340 | - | - | |
Cco07g0242 | 1074 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 555 | 1031 | - | - | |
Cco07g0242 | 1074 | MobiDBLite | consensus disorder prediction | 512 | 529 | - | - | |
Cco07g0242 | 1074 | MobiDBLite | consensus disorder prediction | 40 | 70 | - | - | |
Cco07g0242 | 1074 | MobiDBLite | consensus disorder prediction | 469 | 511 | - | - | |
Cco07g0242 | 1074 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 623 | 1046 | IPR015425 | - | |
Cco07g0242 | 1074 | MobiDBLite | consensus disorder prediction | 198 | 256 | - | - | |
Cco07g0242 | 1074 | MobiDBLite | consensus disorder prediction | 278 | 383 | - | - | |
Cco07g0242 | 1074 | MobiDBLite | consensus disorder prediction | 402 | 430 | - | - | |
Cco07g0242 | 1074 | SMART | it6_source | 623 | 1035 | IPR015425 | - | |
Cco07g0242 | 1074 | MobiDBLite | consensus disorder prediction | 613 | 634 | - | - | |
Cco07g0242 | 1074 | PANTHER | FORMIN-RELATED | 387 | 1068 | IPR027643 | GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro) | |
Cco07g0242 | 1074 | MobiDBLite | consensus disorder prediction | 469 | 596 | - | - | |
Cco07g0242 | 1074 | Coils | Coil | 788 | 815 | - | - | |
Cco07g0242 | 1074 | MobiDBLite | consensus disorder prediction | 368 | 383 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g0897 | Cco-Chr2:10793166 | Cco07g0242 | Cco-Chr7:2495221 | 8.40E-98 | dispersed | |
Cco02g1315 | Cco-Chr2:24954984 | Cco07g0242 | Cco-Chr7:2495221 | 6.20E-146 | dispersed | |
Cco07g0242 | Cco-Chr7:2495221 | Cco11g0111 | Cco-Chr11:1182128 | 1.30E-166 | dispersed | |
Cco07g0242 | Cco-Chr7:2495221 | Cco05g1695 | Cco-Chr5:24880812 | 2.70E-100 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco07g0242 | K28090 | - | csv:101211678 | 1697.95 |