Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco07g0249 | ATGACCACCGGAAGGGAAATTCTCCACAAGATGAAGGTGAAGGCAGGGTTTTGTTCATCAGCAGCTGATACAGGGAAAGGCAAAGGCAAATTGACGACAAATAATAATAATAATAATAAGAATAAGAATATAAGCCATGGGAGTTATTTGGTGAAGGGAAAAGGCAACCATCCAATGGAAGATTACTTGGTTTCCGATTTCAAGCGAGTCAAAGAACATGATTTGGGTTTGTTTGCCATTTTCGATGGCCATTTGGGCCACGATGTTGCTAATTTCTTGCAAAATAATCTATTTCATAACATCCTCAAAGAGGCTGATTTCTGGAGCGAAACAAGAAAAGCCATAAAAAGAGCTTACAAGAAAACAGACGAAGAAATATTGGATAAAGTGAAGCAACTTGGAAAAGGAGGATCAACGGCCGTAACCGCGATCTTGATCGACGGCCACAAACTTGTGGTTGCCAACGTCGGAGATTCTAGAGCTGTTTTGTGCAGAAACGGCGTCGCCGAACAACTTTCCGTTGACCACGAACCCACCAAAGAGAAAAGAGAAATTGAAAGCCGTGGTGGTTTTGTATCAAATATTCCAGGAGATGTTCCACGAGTCGACGGACAATTGGCGGTGGCCAGAGCATTTGGAGATAAGAGCTTAAAAGTCCACCTCAGCTCAGAACCTGACGTGGAAGTCAAAACGGTGGACGAAACTACAGAGTTCATGATTTTGGCTAGCGATGGCATATGGAAGGTGATGACAAACCAAGAAGCAGTAGAATCAATTAGACATATAAAGGATGCGAACATAGCGGCCAAACGACTTATCGACGAAGCAGTGTCTAGAAAAAGCAAGGACGACATATCGTGCATTGTTGTTAGGTTTCAATGA | 882 | 42.74 | MTTGREILHKMKVKAGFCSSAADTGKGKGKLTTNNNNNNKNKNISHGSYLVKGKGNHPMEDYLVSDFKRVKEHDLGLFAIFDGHLGHDVANFLQNNLFHNILKEADFWSETRKAIKRAYKKTDEEILDKVKQLGKGGSTAVTAILIDGHKLVVANVGDSRAVLCRNGVAEQLSVDHEPTKEKREIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKVHLSSEPDVEVKTVDETTEFMILASDGIWKVMTNQEAVESIRHIKDANIAAKRLIDEAVSRKSKDDISCIVVRFQ | 293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2544210 | 2547370 | + | CcPI632755_07g002490.1 | Cco07g0249 | 182902 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco07g0249 | 293 | SMART | PP2C_SIG_2 | 50 | 292 | IPR001932 | - | |
Cco07g0249 | 293 | FunFam | Probable protein phosphatase 2C 39 | 36 | 293 | - | - | |
Cco07g0249 | 293 | SMART | PP2C_4 | 35 | 290 | IPR001932 | - | |
Cco07g0249 | 293 | ProSiteProfiles | PPM-type phosphatase domain profile. | 45 | 292 | IPR001932 | - | |
Cco07g0249 | 293 | CDD | PP2Cc | 44 | 292 | IPR001932 | - | |
Cco07g0249 | 293 | PANTHER | PROTEIN PHOSPHATASE | 40 | 290 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cco07g0249 | 293 | MobiDBLite | consensus disorder prediction | 24 | 45 | - | - | |
Cco07g0249 | 293 | MobiDBLite | consensus disorder prediction | 26 | 45 | - | - | |
Cco07g0249 | 293 | Pfam | Protein phosphatase 2C | 57 | 285 | IPR001932 | - | |
Cco07g0249 | 293 | Gene3D | - | 28 | 293 | IPR036457 | - | |
Cco07g0249 | 293 | SUPERFAMILY | PP2C-like | 39 | 292 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco07g0249 | Cco-Chr7:2544210 | Cco11g1461 | Cco-Chr11:27421448 | 1.60E-87 | dispersed | |
Cco02g1842 | Cco-Chr2:31351442 | Cco07g0249 | Cco-Chr7:2544210 | 1.90E-32 | transposed | |
Cco03g0065 | Cco-Chr3:645667 | Cco07g0249 | Cco-Chr7:2544210 | 2.40E-38 | transposed | |
Cco04g2310 | Cco-Chr4:36628561 | Cco07g0249 | Cco-Chr7:2544210 | 4.30E-86 | transposed | |
Cco06g0742 | Cco-Chr6:8462893 | Cco07g0249 | Cco-Chr7:2544210 | 1.00E-27 | transposed | |
Cco08g0776 | Cco-Chr8:19538892 | Cco07g0249 | Cco-Chr7:2544210 | 5.90E-46 | transposed | |
Cco08g1940 | Cco-Chr8:30281804 | Cco07g0249 | Cco-Chr7:2544210 | 1.50E-31 | transposed | |
Cco11g0828 | Cco-Chr11:9919661 | Cco07g0249 | Cco-Chr7:2544210 | 3.30E-30 | transposed | |
Cco11g1844 | Cco-Chr11:31126697 | Cco07g0249 | Cco-Chr7:2544210 | 1.90E-101 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco07g0249 | K17506 | - | csv:101211399 | 497.278 |