Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0283 ATGGAGGAATCTCTTCTTGGAGGAGGTGGAGAAAGTAGCAGTAGCTCCGGCTCTCGACGTCAAATTCCGCATGTCAGGTTCAGGCGCCGCTCCGACGCCATCGCTTATGGCTCTGCCTATCAAAGAGCAGCTGCTCTTGTGGATCTGGCTGAAGATGGCATTGGTATACCTGAGAAAATTCTTGATCAGTCGAACTTTCAGAGTGCTGCAAAGCTCTACTTCATTTTTATAAAATTTGATTTGATTTGGTCCTTAAATTTCTTTGCGCTGATAGTCCTAAATTTCTTTGAGAAACCATTGTGGTGCTCCAAATATGATACACATTCTTGCAACGACAGGGAGTATTTCTTTCTTGGGCAGTTGCCGTACTTAACAGCTGTTGAATCTCTTATATATGAGGCTGTGACTCTCATAATACTCATGATACACACTTTTTTCCCAATTTCATATGAAGGTGCCCAGCTTTATTGGAAAAATATCTTGAATCAGTTGAAGGTCATTTGCATAACTATTCTGGTTGCCGATTTTCTCGTTTATACGCTATATTTGTCGCCAGTGGCCTTTGATTATCTTCCAGTCAGAGTTGCACCATATATTAGAGTCGTCTTTTTCATCATGAATATCAGGCATCTACGGGAGAGCATCATTATCCTGGCTGGAATGCTTGGCACATACTTGAATGTCATGGCTCTATGGCTTTTGTTTCTTCTGTTTTCCAGCTGGTTGGCATATGTTATTTTTGAGGATACACAGCAGGGGAAATTAATATTTACTTCTTTTGGAGCCACATTATATCAAATGTTTATTTTGTTCACAACATCCAATAATCCGGATGTTTGGATACCTGCCTACAAGGCGTCTCGTTGGTATTGCCTCTTTTTTGTTCTTTACGTGCTGTTGGGTGTTTACTTCGTTACAAATTTGATTCTTGCTGTTGTATACGATAGCTTTAAGAGTCAGCTTGCTAAACAAATTTCTGAGATGGATCGCTTGAGGAAAAGTATATTGGCCAAAGCATTTAGTCTCATGGATACTAATAACGTTGGGTTTATCAATAAAGAGCAGTGCCTTATACTTCTTGAAGAACTCAATAGATACAGGACATTGCCGAAAATATCAAGGGACGATTATGAGTTAATATTTGATGAGCTGGATGACAGTCGTGATTTTAAGATTAATATGAATGAGTTCGATGATCTTTGCAATGCTATAGCCTTGAAGTTCCAGAAGGAGGACATTCCTTCATGGTTTGAAGGGTATCCTTTGATCTACCATTCAGTTTTTTCAAAAAAGTTGAAAGCATTTGTGCGGAGCCCCACATTTGGATATGCTGTATCTTTTATCCTCATACTGAACCTGATTGCTGTTATTATTGAAACAACACTCGATATAGAAAACAATGTGGGTCAGAAAGCATGGCAAGAACTCGAGTTTGTATTTGGTTGGATATATGTAGTTGAAATGGCTCTAAAAATCTACGCGTTTGGGTTTTTGAATTATTGGAGAGATGGTCAAAATCAATTTGATTTCCTTGTCACTTTGATTATAGTGATTGGAGAAACTATAACTTTTGTGGCACCTAGTGGATTGACTTTTCTTTCCAATGGAGAATGGATTCGCTACCTTCTGATAGCAAGAATGTTACGCCTCATAAGGCTCCTAATGCATGTCCGGCAATATCGAGCATTTCTTGCTACCTTCCTAACTCTCATCCCTAGTTTGATGCCATATCTAGGGACTATTTTCTGTGTCCTCTGTCTTTATTGCACTCTTGGCGTGCAGGTCTTTGGAGGCATTGTCAATGCTGGAAATCCCACTTTGTCTAAGACTGATCTGAATGATGATGACTACCTACTTTTCAATTTCAACGACTATCCTAATGGCATGGTGACCCTGTTCAATTTGCTAGTCATGGGAAACTGGCAAGACTGGATGCAGAGCTACAAGGAATTAACCGGAAGTATTTGGAGCCTCATTTATTTTATCAGTTTCTACCTAATAACTGTTTTGCTGCTCTTAAATCTGGTTGTAGCTTTTGTCTTGGAGGCATTCTTTGCTGAATTGGATATTGAATCTTCAGAAAATGGTGAAGAACAGGATCAGGATGGGGATAGTAGAAAGGATCATCGACGTTTCGTAGGCACTAAATCTCGGAGCCGCAAAGGATTCCGATTAGTCCTGTTTCTTTTCCAGATAAGGAATCTTTCATCAAATGAAGCTCTGATCTTTGTACGTTTCCTTACTGCCCGCATCATACTCCCAGATCCCACAGTTCCAGTTCCTCCGTTCCCTATGATGGAGAATTCCAAATAA 2313 39.82 MEESLLGGGGESSSSSGSRRQIPHVRFRRRSDAIAYGSAYQRAAALVDLAEDGIGIPEKILDQSNFQSAAKLYFIFIKFDLIWSLNFFALIVLNFFEKPLWCSKYDTHSCNDREYFFLGQLPYLTAVESLIYEAVTLIILMIHTFFPISYEGAQLYWKNILNQLKVICITILVADFLVYTLYLSPVAFDYLPVRVAPYIRVVFFIMNIRHLRESIIILAGMLGTYLNVMALWLLFLLFSSWLAYVIFEDTQQGKLIFTSFGATLYQMFILFTTSNNPDVWIPAYKASRWYCLFFVLYVLLGVYFVTNLILAVVYDSFKSQLAKQISEMDRLRKSILAKAFSLMDTNNVGFINKEQCLILLEELNRYRTLPKISRDDYELIFDELDDSRDFKINMNEFDDLCNAIALKFQKEDIPSWFEGYPLIYHSVFSKKLKAFVRSPTFGYAVSFILILNLIAVIIETTLDIENNVGQKAWQELEFVFGWIYVVEMALKIYAFGFLNYWRDGQNQFDFLVTLIIVIGETITFVAPSGLTFLSNGEWIRYLLIARMLRLIRLLMHVRQYRAFLATFLTLIPSLMPYLGTIFCVLCLYCTLGVQVFGGIVNAGNPTLSKTDLNDDDYLLFNFNDYPNGMVTLFNLLVMGNWQDWMQSYKELTGSIWSLIYFISFYLITVLLLLNLVVAFVLEAFFAELDIESSENGEEQDQDGDSRKDHRRFVGTKSRSRKGFRLVLFLFQIRNLSSNEALIFVRFLTARIILPDPTVPVPPFPMMENSK 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2884441 2905854 - CcPI632755_07g002830.1 Cco07g0283 182936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0283 770 CDD EFh 336 400 IPR002048 GO:0005509(InterPro)
Cco07g0283 770 Gene3D - 210 318 - -
Cco07g0283 770 Gene3D - 430 563 IPR027359 -
Cco07g0283 770 FunFam Two pore calcium channel protein 1 431 563 - -
Cco07g0283 770 SUPERFAMILY Voltage-gated potassium channels 438 684 - -
Cco07g0283 770 FunFam Two pore calcium channel protein 1 564 721 - -
Cco07g0283 770 Pfam Ion transport protein 131 320 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cco07g0283 770 Pfam Ion transport protein 439 684 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cco07g0283 770 Gene3D - 564 721 - -
Cco07g0283 770 FunFam Two pore calcium channel protein 1 210 321 - -
Cco07g0283 770 MobiDBLite consensus disorder prediction 1 23 - -
Cco07g0283 770 SUPERFAMILY EF-hand 327 418 IPR011992 -
Cco07g0283 770 Gene3D - 319 402 - -
Cco07g0283 770 ProSiteProfiles EF-hand calcium-binding domain profile. 331 366 IPR002048 GO:0005509(InterPro)
Cco07g0283 770 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 722 IPR044581 GO:0000325(PANTHER)|GO:0005245(PANTHER)|GO:0005245(InterPro)|GO:0005774(PANTHER)|GO:0006816(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0283 K16900 - csv:101206980 1291.17