Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0302 ATGGTGGGCTCTGAGGAGGACTCTGGTACTTCTGGGGCTGCGGCGGTGCAGCTCTCTGGCAGTCGGAAAATGTTCTGGCGCTCGGCTTCATGGTCTGCATCACGTTCCTCACTTCACCATCCTGAAGTGAACAGAGAAGGTGGAGACCCCAATGGGAATCTTGGTGATAGTAATGGACCAAGCCGAATTTTCCCTGCTCCATTAACTCCAAGATCACAGCAGCATTGCAAAGCAAGGTCGTGTTTGCCTCCTTTACAGCCTTTGTCGATTGCTCGGCGAAGCTTAGATGAATGGCCGAAGGCGGGGTCAGATGATATCGGCGAGTGGCCACAACCTCCTACTCCGAGTGGCAGAGGAAATGGCGAGAGGTTGAAACTTGATTTGTCGACAATTCAGAGAAATCCAGAAAAGAACTGTGGGCTGGTGAAGAGGGATAAAATTGCTTTCTTTGACAAAGAGTGTTCAAAAGTGGCGGAACATGTATATCTTGGTGGTGATGCGGTTGCTCGAGATAGGGATATACTTAAACATAATGGAATTACTCATGTGTTGAATTGTGTAGGATTCGTATGCCCGGAGTACTTCAAAGATGATTTTGTGTACAGAACTTTGTGGTTGCAGGATAGCCCATCTGAGGATATTACTAGTATTCTTTATGATGTTTTTGACTACTTTGAAGATGTTAGGGAAAAAAATGGTAGGGTTTTTGTTCATTGTTGCCAAGGAGTATCACGGTCGACGTCCTTGGTGATTGCCTATCTGATGTGGAGAGAAGGCCAGAGTTTTGATGATGCATTTCAATATGTGAAGGCAGCCAGAGGTATTGCCGACCCGAATATGGGTTTTGCTTGCCAGTTATTGCAGTGCCAAAAGCGGGTCCATGCTTTTCCTCTTAGCCCTAGTTCACTGTTGAGGATGTACAGAATTGCTCCACACTCACCCTATGATCCTTTGCATTTGGTCCCCAAAATGTTAAATGATCCTTCGCCCTCAGCTCTGGATTCTAGAGGTGCATTTATCATTCATATACCCTCTGCCATATTTGTTTGGATTGGTAAAAACTGCGAAGCTATCATGGAAAGAGATGCGAGGGGAGCTCTTGTGCAGATTGTTCGGTATGAGAGAGTGCAAGGGCCTATATATGTAATTAAGGAAGGGGAAGAACCAACGAACTTTTGGGATTCTTTTGCAAACCTATTACCTTTAATGGATAAATCTAACAGTAAAGTTAATCTTGGGGAATTAAAAGTTAAGCCTTATCCAGGGGAGAGGAAAGTTGATTCCTACGATGTGGATTTTGAAATTTTTCAGAAGGCTATTACTGGTGGTTTCGTACCTCCATTTCCTTCATCTGAAAATGAGCATGAAACCCATCTTCCTGTTAGAGAAAGCAGTTGGAGTGTGCTTAGGCGTAAGTTTGCCTCTGGAAATATGAAAGAGTTTGTATCAGCTCCTCGAATATCGCTTTCTAGGGTCTATTCAGACTCGTTGATGATGATGCATTTTTCTGCAAAATCTTCATCACCTTCAGCATTTTCTTTATCGTCATCATCTTCTTCTCCTATCTATCTTTCGCCGGACTCTCTCTCTTCTGATTCAAGTTCAAGTTCAAGTTCCAAGTACTTTTCAGAATCTTCTTTAGATTCTCCATCTGCTTCTTCACCTTCAGTTCCAGTTTCCTCATCTCTGTCTAGTTTTTCTAGCATGTCTCTTACCTCATCCAATAGTTCCTTAGAACCTATGCCCAGTGGTCCAGAAACTAATGATGCAATCCCTTTGGAATCAAGTTCTCGCCCATTCTCATTCCCATCTAAAAAGTTCTCACCTTCTCTTGCAGAACGTCGAGGTACTGCAAAATCTCTGACATTGCCTGCAATGCCTAGTAAAATCAAAGCAACAAATAGTGCCTCAAGGTTTCTCGCCACTCAAGAAGATTTAAAGAGGAAAAACAAGACTTCTTGCCCTCTTAATGTATCATTTAATATGAAAAATGGCTCAGAGCCTATGGATAGGGTTGAAAATGAACAAACAAGTTCCACTCAGAAGTTCAAGAATATTGAAAATGGAATGGACGTAAGGGTAGGTAGTGTGGCCTCGTGCCAGCAGGAAACTAGAGTTGCCGGACAATCTGCTGGTTCCTGGAAAAGCTATCCCAAACTTTTTGGAGAAGGCATGGTATCCAATGTGTCAAATGGAAAGCAAGATGATGAATTTGTGCAACCTATGGTATACTGTTGGCCGGAGTTGGAAAAGATTGCAGCTTTTGACACAAATTACCTCAATTCTAAAGCTGCTGTAGTGATTTTCTCTCCAAGTAGGTATTTAGGCAAGAAGGATGACATGATGCTGTATATTTGGGTAGGAAGTTCTTTTGACCATGATTTATCACAGGTTCATGTAAAGAGGGATAAAGACTTGGTTGATTTAGAACAGATAGACTGGGTTAAGGTTGGTCAATATGTACTTACGGAAATAGGTCTGCCAGAAAATACAGAAATTAAGATTGTTAAAGAAGGTGAAGAAACAGAGGAATTTCTTGCACGATTGATCATCAAAGATGGACTCCCCTTACGTAATTTAGTGAGGAGACGCTTGAAAATCCAAGTCGTTTTATAG 2616 42.32 MVGSEEDSGTSGAAAVQLSGSRKMFWRSASWSASRSSLHHPEVNREGGDPNGNLGDSNGPSRIFPAPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTPSGRGNGERLKLDLSTIQRNPEKNCGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDRDILKHNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFVWIGKNCEAIMERDARGALVQIVRYERVQGPIYVIKEGEEPTNFWDSFANLLPLMDKSNSKVNLGELKVKPYPGERKVDSYDVDFEIFQKAITGGFVPPFPSSENEHETHLPVRESSWSVLRRKFASGNMKEFVSAPRISLSRVYSDSLMMMHFSAKSSSPSAFSLSSSSSSPIYLSPDSLSSDSSSSSSSKYFSESSLDSPSASSPSVPVSSSLSSFSSMSLTSSNSSLEPMPSGPETNDAIPLESSSRPFSFPSKKFSPSLAERRGTAKSLTLPAMPSKIKATNSASRFLATQEDLKRKNKTSCPLNVSFNMKNGSEPMDRVENEQTSSTQKFKNIENGMDVRVGSVASCQQETRVAGQSAGSWKSYPKLFGEGMVSNVSNGKQDDEFVQPMVYCWPELEKIAAFDTNYLNSKAAVVIFSPSRYLGKKDDMMLYIWVGSSFDHDLSQVHVKRDKDLVDLEQIDWVKVGQYVLTEIGLPENTEIKIVKEGEETEEFLARLIIKDGLPLRNLVRRRLKIQVVL 871
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 3042846 3047451 + CcPI632755_07g003020.1 Cco07g0302 182955
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0302 871 ProSiteProfiles Dual specificity protein phosphatase domain profile. 153 295 IPR020422 GO:0006470(InterPro)
Cco07g0302 871 SMART VILL_6 305 399 IPR007122 GO:0051015(InterPro)
Cco07g0302 871 ProSitePatterns Tyrosine specific protein phosphatases active site. 237 247 IPR016130 GO:0016311(InterPro)
Cco07g0302 871 Gene3D Protein tyrosine phosphatase superfamily 136 295 IPR029021 -
Cco07g0302 871 MobiDBLite consensus disorder prediction 573 620 - -
Cco07g0302 871 CDD DSP 154 288 - -
Cco07g0302 871 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 147 294 IPR029021 -
Cco07g0302 871 MobiDBLite consensus disorder prediction 100 120 - -
Cco07g0302 871 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 212 273 IPR000387 GO:0016311(InterPro)
Cco07g0302 871 PANTHER MKPA PROTEIN 16 847 - -
Cco07g0302 871 SMART dsp_5 153 292 IPR020422 GO:0006470(InterPro)
Cco07g0302 871 Pfam Dual specificity phosphatase, catalytic domain 161 291 IPR000340 GO:0016311(InterPro)
Cco07g0302 871 MobiDBLite consensus disorder prediction 573 604 - -
Cco07g0302 871 Gene3D Severin 304 399 IPR029006 -
Cco07g0302 871 SUPERFAMILY Actin depolymerizing proteins 300 401 - -
Cco07g0302 871 MobiDBLite consensus disorder prediction 29 78 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g2858 Cco-Chr5:36211764 Cco07g0302 Cco-Chr7:3042846 1.10E-152 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0302 - - - 0.0