Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0316 ATGTCTTTCCAGCATAAAAGCTTTTGGATACCTAGGGATGCTGGATGTTTAACGGATGGAGAGATGAACTATGATAGCTCCTCTAGAATTGAAACCAAACGTGGCCATCAATGGTTCATGGATGGCAGTGCACCAGAGCTATTTAGTAGCAAGAAGCAAGCAATCGAAACTGTAAATTCTAGACCTGTTCCAGGAGTTCCACACATGAATGTTTCTCCCTGGGAGAATACTTCAAGTTTTCAGTCAGTTCCTGGACACTTCACTGACCGTCTTTTTGGCTCAGAGCCTATACGAACTGTCAACTTAGTTGATAGAGGTATCACTGTCGGAAATGCAAATATGGACATGGGAAGAAAGGAGTTCGAGAATCATTTTACAAACAACCCATCCGTTGGCTTGTCCATGTCTCAGTCCATTGAGGATCCCTCATCATGCCTCAATTTTGGTGGAATTAGAAAAGTTAAAGTCAATCAAGTCAGGGATCCTGATGTTGGCATGTCTGCTTCTTTGGGGCATGCCTATAGTAGGGGTGATAATGGTACAATTTCAATGGGTACAGCATTTAACAAAAACCATGAGAATGCCATATCGTTGGGCCAAACTTATAATAGTAGAGATGAGAATGCCATCTCGGTTGGCCCTGCATATCACAAGCCAGATGACAATTTTATTTCAATGGGTCATGCTTTCAGCAAGGGTGATGGGAGTTTTATTACAATTGGTCATAACTATAGCAAGGGAGATAATAGCATTCTATCGATGAGTCAGCCTTTTGACAAGGGGGATGACTCTTTTATTTCAATGGGTCAATCTTATGAGAAGGCTGAAGGAAATATCATTTCTTTTGGTGCCTCCTACAATAAAGGGCAAGAAAATTTTATAACAATGGGGCCAACCTATAGTAAGGCGGGTGATACTTTCATTTCAATGGCTTCATCCTTTAATAAGGGAAGTGATGATAACTTATCCATGGGTCCAACCTATGACAAGGTGAACTCTGACATTGTACATGTCGGTCCTAAATTTGACAAAGCAGATTCTGGTGCTGTGTCAATGGCTCACAACTATCATAAGGGTGAGAGTAATACCATATCTTTTGGAGGTTTTGATGATGAGAATGGGACAGATAATCCTTCTGGTGGGATCATTAGCAGTTATGACTTGTTAATGGCTAATCAGACTTCTGTCCAAGCATCAGAAGTATCAACCCTGAGAGATTCTGTTGATCCCAATATGGAAGTAAACATTAACAATGCCATAAAGGTTGATGGGAAAATTGACACAAGTTCCAAGAATAAAGAGCCGAGGATGAGTAAGAAGGTACCACCAAATAGCTTCCCTTCAAATGTTAAAAGCTTGCTCTCAACTGGTATGCTTGATGGGGTTCCAGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTCAAGGGAATTATTAAAGGGACTGGATACTTGTGCAGCTGTGACAACTGCAATCATTCAAAGGCTCTCAATGCTTATGAATTTGAGAGGCATGCTGGCTGCAAAACCAAACATCCAAATAACCACATTTACTTTGAGAATGGTAAAACTATCTATGCTGTTGTCCAAGAGCTAAAGAATACCCCTCAGGAGATGCTATTTGATGCAATTCAGAATGTGACTGGCTCTCCTATTAATCAGAAGAACTTTCGTATTTGGAAAGCATCTTACCAAGCTGCCACCCTTGAACTCCAGCGTATTTATGGAAAAGATGAAGTAATTATGCCTTCTTGA 1755 40.63 MSFQHKSFWIPRDAGCLTDGEMNYDSSSRIETKRGHQWFMDGSAPELFSSKKQAIETVNSRPVPGVPHMNVSPWENTSSFQSVPGHFTDRLFGSEPIRTVNLVDRGITVGNANMDMGRKEFENHFTNNPSVGLSMSQSIEDPSSCLNFGGIRKVKVNQVRDPDVGMSASLGHAYSRGDNGTISMGTAFNKNHENAISLGQTYNSRDENAISVGPAYHKPDDNFISMGHAFSKGDGSFITIGHNYSKGDNSILSMSQPFDKGDDSFISMGQSYEKAEGNIISFGASYNKGQENFITMGPTYSKAGDTFISMASSFNKGSDDNLSMGPTYDKVNSDIVHVGPKFDKADSGAVSMAHNYHKGESNTISFGGFDDENGTDNPSGGIISSYDLLMANQTSVQASEVSTLRDSVDPNMEVNINNAIKVDGKIDTSSKNKEPRMSKKVPPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGIIKGTGYLCSCDNCNHSKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSPINQKNFRIWKASYQAATLELQRIYGKDEVIMPS 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3175628 3181817 + CcPI632755_07g003160.1 Cco07g0316 182969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0316 584 MobiDBLite consensus disorder prediction 425 446 - -
Cco07g0316 584 Pfam Tify domain binding domain 477 532 IPR032308 -
Cco07g0316 584 PANTHER AUTOIMMUNE REGULATOR 6 565 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco10g2081 Cco-Chr10:34170807 Cco07g0316 Cco-Chr7:3175628 2.30E-42 wgd
Cco02g2180 Cco-Chr2:34464007 Cco07g0316 Cco-Chr7:3175628 9.20E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0316 - - - 0.0