Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0318 ATGGAGAGTTTTGTAAGGTTTTTGGGTTCGGCAAAACCGTATTTTGGAGTTATTTTTATACAGTTTGGTTATGCTGGAATGACGATTCTTACAAAATCAGCTTTGAACAAAGGGATGAGCCAATATATTTTTGTGGTTTATCGTCAAGTTGCTGCTACTCTTGTCATGGCTCCTTTTGCCATTATCTTTGATAGGAAGGCGAGGACAAAGATGACCTTTTCATTGTTCTTCAAGATTTTGATTCTGGGTTTCTTAGAGCCAGTGATTGATCAAAACTTATTCTATACTGGTATGAAGTACACAACAGCAACTTTTGCATCTGCCATGTGCAATGTTCTTCCAGCTTTTGTTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAATATTTTGAAAAGGGGAAGCCAAGCAAAAATCCTAGGAACCATAGTAACAGTAGGAGGAGCCATGATTATGACCTTCATAAAAGGGCCAATGTTGAATTTACCATGGACAAAATTACCCAATCACCCCTCTGCTTCTTCTTCATCAGCTTCTTCTCCAAATCACCAAAGCACAATCATGGGCTTCCTCATGATTGCAACTGGCTGCATTTGCTGGTCAGCTTTCATCATTCTTCAGGCAATTACGTTGAAATCGTACCCGGCCGAGCTATCGCTTACAGCATTGATATGCTTGGTTGGCACCATTGGAGGCTCTGGGTTTGCTTTGATCATGGAGAGGGGGAACCCTTCTGCTTGGGCTTTGCACTTTGACAGCCAGCTTCTAGCTGTGGTTTATTCTGGTGTAATATGTTCGGGGGTAACTTATTATATTCAAGGAGTGGTGATGCAAACAAAAGGGCCTGTTTTTTTCTCTGCATTCAATCCTCTGTCCATGATTCTTGTTGCAATCATGAGCTCCTTCATCTTGTCTGAGATTATGTTGTTGGGAAGGATTGTTGGAGCAGTGGTCATAATCATTGGCTTGTACCTTGTTTTGTGGGGGAAAACCAAAGATCAGCCTTCAATACTTAAATCAGAATGTGATAAGATAACACCTTGTGAGCAACAAATGATCACTGCAAATGATGAGGCTTCCAAGACGACGATGCCGGTTCGATCGAGTCAAGAATTCGTCGCACTTGATGTTGAAAAAGAGGAGAGAAATTGA 1155 41.65 MESFVRFLGSAKPYFGVIFIQFGYAGMTILTKSALNKGMSQYIFVVYRQVAATLVMAPFAIIFDRKARTKMTFSLFFKILILGFLEPVIDQNLFYTGMKYTTATFASAMCNVLPAFVFLMAWACRLEKVNILKRGSQAKILGTIVTVGGAMIMTFIKGPMLNLPWTKLPNHPSASSSSASSPNHQSTIMGFLMIATGCICWSAFIILQAITLKSYPAELSLTALICLVGTIGGSGFALIMERGNPSAWALHFDSQLLAVVYSGVICSGVTYYIQGVVMQTKGPVFFSAFNPLSMILVAIMSSFILSEIMLLGRIVGAVVIIIGLYLVLWGKTKDQPSILKSECDKITPCEQQMITANDEASKTTMPVRSSQEFVALDVEKEERN 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3229658 3235671 - CcPI632755_07g003180.1 Cco07g0318 182971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0318 384 PANTHER WAT1-RELATED PROTEIN 18 347 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cco07g0318 384 Pfam EamA-like transporter family 14 153 IPR000620 GO:0016020(InterPro)
Cco07g0318 384 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020(InterPro)
Cco07g0318 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Cco07g0318 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 333 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1041 Cco-Chr4:25966314 Cco07g0318 Cco-Chr7:3229658 3.50E-111 dispersed
Cco07g0318 Cco-Chr7:3229658 Cco09g2209 Cco-Chr9:36453328 2.70E-111 dispersed
Cco07g0317 Cco-Chr7:3183075 Cco07g0318 Cco-Chr7:3229658 2.00E-151 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0318 - - - 0.0